DK959313 |
Clone id |
TST39A01NGRL0004_F14 |
Library |
TST39 |
Length |
693 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_F14. 5' end sequence. |
Accession |
DK959313 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1103Contig1 |
Sequence |
GGCGAGGGGGAGTTCTTCTGATGCAGATGAACCCTTCACGCTTCCCTTACTCCAGAAGGC GAGGGGGAGGAGGAGATGGATGATGCAGTCCAGCAGCACCTCCTTCTTGATAATGGTGCG TTGCAAGAAGATGGCGATGAATACCACAAGAAGGAGGACCTCCAGCCCATCCCGCTCGCG CACAGAACCTTTTCCGGCTTGGACATTGCCTGCTTCTGGGTGGGTATGGTCATCTCTGTT TCGACTTTCTACGTTGCGGGCTCTCTCGTTGAACAGGGCATGTCCTGGTGGCAGGGTCTC CTCACAGTTGCGCTCGCTAACTTCTTACAACTCTTGCTTCTCATTTGTATGGGCCATTCA GGTACCAAGTACGGAATTCCCTTCCCCGTCTTATGTCGATCTTCGCTTGGTACCAGAGGT GCCCACATCGCTGCCTGTCTTCGCGGTGTCAGCTCCTGTGGTTGGTTTGGCATCGACACA TGGATCGGAGCACAAGCTCTCTTTGTCTTTCTAGATGCTCTGTGCAACGGAAGCCTTCAA GAGTGGCAAGCCATTGCATGGATTGGTATTTCGTTGCCACAGCTTGGATGTTTTGGGGCA TTCTGGCTTTTTCAAGTAGGGTTTATATGGCAAGGCATGGATGGAATCCGTTATCTCGAG AAGTATTCTGCCCCTCTTCTTTTCATTCTGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P94575 |
Definition |
sp|P94575|ALLP_BACSU Probable allantoin permease OS=Bacillus subtilis |
Align length |
182 |
Score (bit) |
106.0 |
E-value |
1.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RXL2 |
Definition |
tr|A9RXL2|A9RXL2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
179 |
Score (bit) |
189.0 |
E-value |
1.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959313|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_F14, 5' (693 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RXL2|A9RXL2_PHYPA Predicted protein OS=Physcomitrella paten... 189 1e-46 tr|A5BL02|A5BL02_VITVI Putative uncharacterized protein OS=Vitis... 187 7e-46 tr|A9T620|A9T620_PHYPA Predicted protein OS=Physcomitrella paten... 183 1e-44 tr|Q9LZD0|Q9LZD0_ARATH Uracil transporter-like protein OS=Arabid... 180 9e-44 tr|Q93Z26|Q93Z26_ARATH At5g03555/C415EPL23M (Uracil transporter-... 180 9e-44 tr|A8J166|A8J166_CHLRE Predicted protein OS=Chlamydomonas reinha... 177 6e-43 tr|A6G013|A6G013_9DELT NCS1 nucleoside transporter family protei... 162 1e-38 tr|Q39PA9|Q39PA9_BURS3 Cytosine/purines, uracil, thiamine, allan... 161 3e-38 tr|B4EPC0|B4EPC0_BURCJ Putative cytosine/purines, uracil, thiami... 160 7e-38 tr|B6BF61|B6BF61_9RHOB NCS1 nucleoside transporter family OS=Rho... 160 7e-38 tr|Q1BV56|Q1BV56_BURCA NCS1 nucleoside transporter family OS=Bur... 160 9e-38 tr|A0KCQ6|A0KCQ6_BURCH NCS1 nucleoside transporter family OS=Bur... 160 9e-38 tr|Q1GJU5|Q1GJU5_SILST NCS1 nucleoside transporter family OS=Sil... 159 1e-37 tr|A2W5S5|A2W5S5_9BURK Cytosine/uracil/thiamine/allantoin permea... 159 1e-37 tr|Q13WL5|Q13WL5_BURXL Nucleobase/cation symporter, NCS1 family ... 159 2e-37 tr|B4RSA2|B4RSA2_ALTMD Cytosine/purines, uracil, thiamine, allan... 157 5e-37 tr|B5WC41|B5WC41_9BURK NCS1 nucleoside transporter family OS=Bur... 157 5e-37 tr|B1G9C7|B1G9C7_9BURK NCS1 nucleoside transporter family OS=Bur... 157 5e-37 tr|A1B125|A1B125_PARDP NCS1 nucleoside transporter family OS=Par... 157 6e-37 tr|B2SY04|B2SY04_BURPP NCS1 nucleoside transporter family OS=Bur... 157 8e-37 tr|A9ATH3|A9ATH3_BURM1 NCS1 nucleoside transporter family (NCS1 ... 157 8e-37 tr|A4JQA3|A4JQA3_BURVG NCS1 nucleoside transporter family OS=Bur... 157 8e-37 tr|Q0B2W5|Q0B2W5_BURCM NCS1 nucleoside transporter family OS=Bur... 155 2e-36 tr|B2JJH2|B2JJH2_BURP8 NCS1 nucleoside transporter family OS=Bur... 155 2e-36 tr|B1Z5W6|B1Z5W6_BURA4 NCS1 nucleoside transporter family OS=Bur... 155 2e-36 tr|B1FKG9|B1FKG9_9BURK NCS1 nucleoside transporter family OS=Bur... 155 2e-36 tr|B1TAT3|B1TAT3_9BURK NCS1 nucleoside transporter family OS=Bur... 155 3e-36 tr|B6QZ53|B6QZ53_9RHOB NCS1 nucleoside transporter family protei... 153 9e-36 tr|B5SLX9|B5SLX9_RALSO Permease protein OS=Ralstonia solanacearu... 153 1e-35 tr|A3RVE2|A3RVE2_RALSO Cytosine/uracil/thiamine/allantoin permea... 153 1e-35
>tr|A9RXL2|A9RXL2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_120934 PE=4 SV=1 Length = 540
Score = 189 bits (481), Expect = 1e-46 Identities = 90/179 (50%), Positives = 116/179 (64%) Frame = +1
Query: 154 EDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWWQGXXXXXXXXXXXX 333 ED P A R F+ D+AC W+G+VI V T+Y+AGSLVE GMSWW+G Sbjct: 67 EDFAPTMPADRIFTVWDMACLWIGLVIGVPTYYMAGSLVELGMSWWEGIVTVFIGNMVVL 126
Query: 334 XXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFGIDTWIGAQALFVFL 513 + +GH+GTK+G+PFPVL R+S G RGA++ + LR + +CGWFGI TWIG QA+F L Sbjct: 127 VPMVLIGHAGTKFGVPFPVLARASFGIRGANVPSLLRALVACGWFGIQTWIGGQAVFQLL 186
Query: 514 DALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIRYLEKYSAPLLFIL 690 +A NGSL + W+GIS + GCF AFWL QV I G++ IR LE SAP+L L Sbjct: 187 NASLNGSL-AGSVVPWLGISAAEFGCFMAFWLLQVTIISHGIESIRKLENLSAPILIAL 244
>tr|A5BL02|A5BL02_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030411 PE=4 SV=1 Length = 563
Score = 187 bits (474), Expect = 7e-46 Identities = 87/179 (48%), Positives = 114/179 (63%) Frame = +1
Query: 154 EDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWWQGXXXXXXXXXXXX 333 +DL+P RTFSG ++A WVG+V+ V ++Y+AGSLVE GM+WWQG Sbjct: 82 DDLKPTAPHQRTFSGWEMASLWVGLVVGVPSYYLAGSLVELGMAWWQGIATVVAANIILL 141
Query: 334 XXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFGIDTWIGAQALFVFL 513 + GH GT+YGI FPVL RS+ G RGAH+ LR + CGW+GI+TWIG +A+F+ L Sbjct: 142 VPLVLTGHPGTRYGISFPVLARSAFGIRGAHLPTLLRALVGCGWYGIETWIGGEAIFLLL 201
Query: 514 DALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIRYLEKYSAPLLFIL 690 S Q + W+G S + CF FWL Q+ +W+GMDGIR LEKYSAP+L IL Sbjct: 202 PKTIKQSSLS-QFLPWLGTSPLEFSCFIVFWLAQLAIVWRGMDGIRELEKYSAPILIIL 259
>tr|A9T620|A9T620_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191990 PE=4 SV=1 Length = 614
Score = 183 bits (464), Expect = 1e-44 Identities = 87/187 (46%), Positives = 116/187 (62%) Frame = +1
Query: 130 DGDEYHKKEDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWWQGXXXX 309 D D+ D P A R F+ D+AC W+G+V+ V T+Y+AGSLVE GMSW +G Sbjct: 125 DPDDSLFNADFAPTMPAGRIFTVWDMACLWIGLVVGVPTYYMAGSLVEMGMSWLEGVLTV 184
Query: 310 XXXXXXXXXXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFGIDTWIG 489 + GHSGTK+G+PFPVL R++ G RGA++ + LR +CGWFGI TWIG Sbjct: 185 FVGNVVVLVPLVLSGHSGTKFGVPFPVLARAAFGIRGANVPSLLRAFVACGWFGIQTWIG 244
Query: 490 AQALFVFLDALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIRYLEKYS 669 QA++ L+AL +G L + W+GIS + GCF FWL QVG + G++ IR LEK S Sbjct: 245 GQAIYQLLNALFHGRLAS-SVLPWLGISASEFGCFMVFWLLQVGIVSNGIESIRELEKLS 303
Query: 670 APLLFIL 690 AP+L L Sbjct: 304 APILIAL 310
>tr|Q9LZD0|Q9LZD0_ARATH Uracil transporter-like protein OS=Arabidopsis thaliana GN=F12E4_350 PE=4 SV=1 Length = 599
Score = 180 bits (456), Expect = 9e-44 Identities = 87/194 (44%), Positives = 115/194 (59%) Frame = +1
Query: 109 DNGALQEDGDEYHKKEDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSW 288 D+G + D +DL+P + RTFS LD++ W+G+V+ V T+Y+AGSLV+ GM+W Sbjct: 105 DHGYDESQFDPSLTNDDLKPTTPSQRTFSWLDMSSLWIGLVVGVPTYYLAGSLVDLGMAW 164
Query: 289 WQGXXXXXXXXXXXXXXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWF 468 WQG + GT YGI FPVL RSS G RGAHI LR + CGW+ Sbjct: 165 WQGIATVVTANLILLVPLVLTAQPGTLYGISFPVLARSSFGIRGAHIPTLLRALVGCGWY 224
Query: 469 GIDTWIGAQALFVFLDALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGI 648 GI+TWIG +A+F+ L S + W+G S + CF FWL Q+ +W+GMDGI Sbjct: 225 GIETWIGGEAIFLLLPGHIKKSALS-HTLPWLGTSPLEFSCFIVFWLAQLCIVWRGMDGI 283
Query: 649 RYLEKYSAPLLFIL 690 R LEKYSAP+L L Sbjct: 284 RKLEKYSAPILISL 297
>tr|Q93Z26|Q93Z26_ARATH At5g03555/C415EPL23M (Uracil transporter-like protein) OS=Arabidopsis thaliana PE=2 SV=1 Length = 502
Score = 180 bits (456), Expect = 9e-44 Identities = 87/194 (44%), Positives = 115/194 (59%) Frame = +1
Query: 109 DNGALQEDGDEYHKKEDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSW 288 D+G + D +DL+P + RTFS LD++ W+G+V+ V T+Y+AGSLV+ GM+W Sbjct: 8 DHGYDESQFDPSLTNDDLKPTTPSQRTFSWLDMSSLWIGLVVGVPTYYLAGSLVDLGMAW 67
Query: 289 WQGXXXXXXXXXXXXXXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWF 468 WQG + GT YGI FPVL RSS G RGAHI LR + CGW+ Sbjct: 68 WQGIATVVTANLILLVPLVLTAQPGTLYGISFPVLARSSFGIRGAHIPTLLRALVGCGWY 127
Query: 469 GIDTWIGAQALFVFLDALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGI 648 GI+TWIG +A+F+ L S + W+G S + CF FWL Q+ +W+GMDGI Sbjct: 128 GIETWIGGEAIFLLLPGHIKKSALS-HTLPWLGTSPLEFSCFIVFWLAQLCIVWRGMDGI 186
Query: 649 RYLEKYSAPLLFIL 690 R LEKYSAP+L L Sbjct: 187 RKLEKYSAPILISL 200
>tr|A8J166|A8J166_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_191336 PE=4 SV=1 Length = 528
Score = 177 bits (449), Expect = 6e-43 Identities = 84/176 (47%), Positives = 111/176 (63%) Frame = +1
Query: 154 EDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWWQGXXXXXXXXXXXX 333 ED P RTF D A FW+ +VIS++T+Y+A SLV+ GMSWWQG Sbjct: 23 EDFSPTTQDKRTFDTTDYATFWITLVISITTYYLAASLVDLGMSWWQGILTVFFGNLITL 82
Query: 334 XXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFGIDTWIGAQALFVFL 513 + H GTKYG+PFPVL R+S G +GA++ + R + +CGWFGI TWIG ++F L Sbjct: 83 LPMVLNAHPGTKYGVPFPVLARASFGIQGANLPSLSRAIVACGWFGIQTWIGGSSIFQML 142
Query: 514 DALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIRYLEKYSAPLL 681 A+ G++ IAW+GISLP+L CF FW QV + +GM+ IR LEKYSAP+L Sbjct: 143 MAVTGGAVAA-APIAWLGISLPELLCFLGFWAAQVWIVVRGMESIRILEKYSAPIL 197
>tr|A6G013|A6G013_9DELT NCS1 nucleoside transporter family protein OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_12543 PE=4 SV=1 Length = 500
Score = 162 bits (411), Expect = 1e-38 Identities = 75/179 (41%), Positives = 108/179 (60%) Frame = +1
Query: 154 EDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWWQGXXXXXXXXXXXX 333 +D++P P R +S L +A WVGMV+ V T+ +AG L++QGMSW Q Sbjct: 25 DDIRPTPAKDRHWSVLSMASLWVGMVVCVPTYMLAGGLIDQGMSWSQAVITVMLGNLVVL 84
Query: 334 XXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFGIDTWIGAQALFVFL 513 + GH GTKYG+PFPVL R+S G GAH+ + +R + +CGWFGI TW+G A+F L Sbjct: 85 APMVLNGHPGTKYGVPFPVLARASFGIHGAHVPSLMRALVACGWFGIQTWVGGAAIFQLL 144
Query: 514 DALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIRYLEKYSAPLLFIL 690 D + + L + + +GI+ +L CF AFW QV I +G++ IR LE +AP L ++ Sbjct: 145 DVMFSADLTAYADLPVLGINGVELTCFLAFWALQVVIIHRGVESIRVLESAAAPFLIVM 203
>tr|Q39PA9|Q39PA9_BURS3 Cytosine/purines, uracil, thiamine, allantoin transporter OS=Burkholderia sp. (strain 383) GN=Bcep18194_C6657 PE=4 SV=1 Length = 502
Score = 161 bits (408), Expect = 3e-38 Identities = 77/194 (39%), Positives = 115/194 (59%) Frame = +1
Query: 112 NGALQEDGDEYHKKEDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWW 291 + A + G Y+ +DL P A RT+ A WVGMV++++++ +A L+++GMS W Sbjct: 11 DSAAAQGGSLYN--DDLAPTTPAQRTWKWYHFAALWVGMVMNIASYMLAAGLIQEGMSPW 68
Query: 292 QGXXXXXXXXXXXXXXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFG 471 Q + +GH+GTK+GIP+ VL R+S GT+GA + A LR + +CGW+G Sbjct: 69 QAVTTVLLGNLIVLVPMLLIGHAGTKHGIPYAVLVRASFGTQGAKLPALLRAIVACGWYG 128
Query: 472 IDTWIGAQALFVFLDALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIR 651 I TW+G A++ L+ L G+ A+ IGI QL CF FW Q+ FIW G D IR Sbjct: 129 IQTWLGGSAIYTLLNIL-TGNALHGAALPVIGIGFGQLACFLVFWALQLYFIWHGTDSIR 187
Query: 652 YLEKYSAPLLFILC 693 +LE +SAP+ ++C Sbjct: 188 WLESWSAPIKVVMC 201
>tr|B4EPC0|B4EPC0_BURCJ Putative cytosine/purines, uracil, thiamine, allantoin permease OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=BceJ2315_69850 PE=4 SV=1 Length = 502
Score = 160 bits (405), Expect = 7e-38 Identities = 73/180 (40%), Positives = 109/180 (60%) Frame = +1
Query: 154 EDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWWQGXXXXXXXXXXXX 333 +DL P A RT+ A WVGMV++++++ +A L+++GMS WQ Sbjct: 23 DDLAPTTPAQRTWKWYHFAALWVGMVMNIASYMLAAGLIQEGMSPWQAVMTVLLGNLIVL 82
Query: 334 XXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFGIDTWIGAQALFVFL 513 + +GH+G K+GIP+ VL R+S GT+GA + A LR + +CGW+GI TW+G A++ L Sbjct: 83 VPMLLIGHAGAKHGIPYAVLVRASFGTQGAKLPALLRAIVACGWYGIQTWLGGSAIYTLL 142
Query: 514 DALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIRYLEKYSAPLLFILC 693 + L G+ A+ +GIS QL CF FW Q+ FIW G D IR+LE +SAP+ ++C Sbjct: 143 NIL-TGNALHGAALPLVGISFGQLACFLVFWALQLYFIWHGTDSIRWLESWSAPIKVVMC 201
>tr|B6BF61|B6BF61_9RHOB NCS1 nucleoside transporter family OS=Rhodobacterales bacterium Y4I GN=RBY4I_4156 PE=4 SV=1 Length = 496
Score = 160 bits (405), Expect = 7e-38 Identities = 81/179 (45%), Positives = 105/179 (58%) Frame = +1
Query: 154 EDLQPIPLAHRTFSGLDIACFWVGMVISVSTFYVAGSLVEQGMSWWQGXXXXXXXXXXXX 333 ED P A RT+ L IA WVGMV+ + T+ +A L+ GMSW Q Sbjct: 31 EDQLPTTAAERTWDWLAIAALWVGMVVCIPTYLLASYLIGSGMSWDQAVLTILAANAIVL 90
Query: 334 XXXICMGHSGTKYGIPFPVLCRSSLGTRGAHIAACLRGVSSCGWFGIDTWIGAQALFVFL 513 + +GH+GTKYGIPFPVL RSS G GA I A RG+ +CGWFGI TW+G A+FV L Sbjct: 91 IPMVLVGHAGTKYGIPFPVLLRSSFGPTGAKIPAVARGIVACGWFGIQTWVGGSAIFVIL 150
Query: 514 DALCNGSLQEWQAIAWIGISLPQLGCFGAFWLFQVGFIWQGMDGIRYLEKYSAPLLFIL 690 + L G+L +A+ +GIS + CF AFW + FI G + IR+LE Y+AP L + Sbjct: 151 NTLTGGAL-AGEALPVLGISAGEFICFLAFWALHLYFIANGTESIRWLETYAAPFLLAM 208
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