DK959336 |
Clone id |
TST39A01NGRL0004_G15 |
Library |
TST39 |
Length |
681 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_G15. 5' end sequence. |
Accession |
DK959336 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL567Contig1 |
Sequence |
GGCGTTTCCAGCAGACACAGACAACAAAAAACTCACACGCCCGCGCGCCTCTCGCCGCTC TCGCTTCTCCCAGCTCCAGTTCTTATGCTATCTATGGAGCATGCGGCAGCAGCAGCAGCG ACGTCCGCCGCAGCTTCCCCTCCCGCCTTCTCCTTTGGTGAAACCAGAGTCTCTTGGCGG CCCTTCTCTCGTGACTCCTCCGCCAGTGCTTACCATTGCCGCACAAACACTTGCAAGATC AGTCTTCTCAGAACAAGAGAGCATACGGAGAGGCATCATGCCGGAGTAGCGGCTTCTTAT ACCCCACAAGCTCTCAAAGGTGACAGCGTTTCTCAAACCGAGGACTACACGAAGTATTTT GACTTTGTTGTGATCGGCAGTGGCATAGCAGGACTACGATATGCACTTGATGTGGCCAAA TGTGGTACTGTTGCTATCATTACAAAGGCTGAACCTCATGAGACCAATACATCCTACGCC CAGGGCGGAGTAAGTGCTGTTTTGGATCCGCTTGACTCTGTTGAAAATCACATTCGGGAC ACTATTGTTGCTGGAGCTTATTTGTGTGATGAGGAGGCAGTTGAGGTTGTCTGCAGGGAA GGACCAGAGAGGGTGAAAGAGCTTATCGCTATGGGAGCATCATTTGATCAAGGAGAAGAT GGTCGTTTGCATCTTGCACGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9X8N8 |
Definition |
sp|Q9X8N8|NADB_STRCO L-aspartate oxidase OS=Streptomyces coelicolor |
Align length |
108 |
Score (bit) |
100.0 |
E-value |
9.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959336|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_G15, 5' (667 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9X8N8|NADB_STRCO L-aspartate oxidase OS=Streptomyces coelico... 100 9e-21 sp|Q9KPA4|NADB_VIBCH L-aspartate oxidase OS=Vibrio cholerae GN=n... 99 3e-20 sp|Q8ZD80|NADB_YERPE L-aspartate oxidase OS=Yersinia pestis GN=n... 88 4e-17 sp|P74562|NADB_SYNY3 L-aspartate oxidase OS=Synechocystis sp. (s... 88 4e-17 sp|P65499|NADB_MYCTU L-aspartate oxidase OS=Mycobacterium tuberc... 86 1e-16 sp|P65500|NADB_MYCBO L-aspartate oxidase OS=Mycobacterium bovis ... 86 1e-16 sp|P10902|NADB_ECOLI L-aspartate oxidase OS=Escherichia coli (st... 86 2e-16 sp|Q8XA23|NADB_ECO57 L-aspartate oxidase OS=Escherichia coli O15... 86 2e-16 sp|Q51363|NADB_PSEAE L-aspartate oxidase OS=Pseudomonas aerugino... 85 3e-16 sp|Q8ZMX9|NADB_SALTY L-aspartate oxidase OS=Salmonella typhimuri... 85 4e-16 sp|Q8Z4K0|NADB_SALTI L-aspartate oxidase OS=Salmonella typhi GN=... 85 4e-16 sp|Q8ZQU3|DHSA_SALTY Succinate dehydrogenase flavoprotein subuni... 83 1e-15 sp|P0AC41|DHSA_ECOLI Succinate dehydrogenase flavoprotein subuni... 83 1e-15 sp|P0AC42|DHSA_ECOL6 Succinate dehydrogenase flavoprotein subuni... 83 1e-15 sp|P0AC43|DHSA_ECO57 Succinate dehydrogenase flavoprotein subuni... 83 1e-15 sp|Q8XWM7|NADB1_RALSO L-aspartate oxidase 1 OS=Ralstonia solanac... 83 2e-15 sp|Q8YXJ6|NADB_ANASP L-aspartate oxidase OS=Anabaena sp. (strain... 82 3e-15 sp|Q9K107|NADB_NEIMB L-aspartate oxidase OS=Neisseria meningitid... 81 4e-15 sp|Q9JSX4|NADB_NEIMA L-aspartate oxidase OS=Neisseria meningitid... 81 4e-15 sp|Q49617|NADB_MYCLE L-aspartate oxidase OS=Mycobacterium leprae... 81 4e-15 sp|Q8XQG4|NADB2_RALSO L-aspartate oxidase 2 OS=Ralstonia solanac... 80 7e-15 sp|Q92R32|NADB_RHIME L-aspartate oxidase OS=Rhizobium meliloti G... 79 2e-14 sp|Q68XN9|DHSA_RICTY Succinate dehydrogenase flavoprotein subuni... 78 4e-14 sp|Q9A4C3|NADB_CAUCR L-aspartate oxidase OS=Caulobacter crescent... 77 6e-14 sp|Q98AV8|NADB_RHILO L-aspartate oxidase OS=Rhizobium loti GN=na... 77 8e-14 sp|P64174|FRDA_MYCTU Fumarate reductase flavoprotein subunit OS=... 77 8e-14 sp|P64175|FRDA_MYCBO Fumarate reductase flavoprotein subunit OS=... 77 8e-14 sp|Q4UJM1|DHSA_RICFE Succinate dehydrogenase flavoprotein subuni... 77 1e-13 sp|Q92J97|DHSA_RICCN Succinate dehydrogenase flavoprotein subuni... 77 1e-13 sp|Q9ZPX5|DHSA2_ARATH Succinate dehydrogenase [ubiquinone] flavo... 77 1e-13
>sp|Q9X8N8|NADB_STRCO L-aspartate oxidase OS=Streptomyces coelicolor GN=nadB PE=3 SV=1 Length = 580
Score = 100 bits (248), Expect = 9e-21 Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 1/108 (0%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCGT-VAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIR 523 D VV+GSG+AGL AL G ++TKA + +T +AQGGV+A L D+ E H+ Sbjct: 20 DVVVVGSGVAGLTAALRCESAGLRTVVVTKARLDDGSTRWAQGGVAAALGEGDTPEQHLD 79
Query: 524 DTIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDGRLHLAR 667 DT+VAGA LCD++AV ++ EGP+ V+ LIA GA FD+ +G L L R Sbjct: 80 DTLVAGAGLCDQDAVRILVTEGPDAVRRLIATGAHFDESTEGGLALTR 127
>sp|Q9KPA4|NADB_VIBCH L-aspartate oxidase OS=Vibrio cholerae GN=nadB PE=3 SV=2 Length = 535
Score = 98.6 bits (244), Expect = 3e-20 Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 5/112 (4%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 526 D +VIGSG AGL AL VA+ G V +++K E T YAQGG++AV D DS+E+H++D Sbjct: 10 DVLVIGSGAAGLSLALQVAQYGKVIVLSKGPRSEGATFYAQGGIAAVFDESDSIESHVQD 69
Query: 527 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDG-----RLHLAR 667 T++AGA +CDE+ V + E V+ LI G FD+ ED R HL R Sbjct: 70 TLIAGAGICDEQTVRFIAEHAKECVQWLIDGGVPFDKEEDSDNDHPRYHLTR 121
>sp|Q8ZD80|NADB_YERPE L-aspartate oxidase OS=Yersinia pestis GN=nadB PE=3 SV=2 Length = 533
Score = 88.2 bits (217), Expect = 4e-17 Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 5/112 (4%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 526 D ++IGSG AGL AL +A V +++K +E T YAQGG++AV D DS+ +H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLAPHCKVTVLSKGPLNEGATFYAQGGIAAVFDETDSISSHVDD 69
Query: 527 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAR 667 T++AGA LCD+EAVE + V+ LI G FD GE+ R HL R Sbjct: 70 TLIAGAGLCDKEAVEFIASNARSCVQWLIDQGVLFDTETSANGEE-RYHLTR 120
>sp|P74562|NADB_SYNY3 L-aspartate oxidase OS=Synechocystis sp. (strain PCC 6803) GN=nadB PE=3 SV=1 Length = 553
Score = 88.2 bits (217), Expect = 4e-17 Identities = 44/98 (44%), Positives = 62/98 (63%) Frame = +2
Query: 344 FDFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIR 523 FD VV+GSG AGL L + VA++TKAE + +AQGG++A + P DS ++H Sbjct: 6 FDVVVVGSGAAGLYACLCLPGHYRVALVTKAELKTGASDWAQGGIAAAIAPTDSPQSHYE 65
Query: 524 DTIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQ 637 DT+ AGA LCD EAV+ + P+ + EL+ G SFD+ Sbjct: 66 DTLAAGAGLCDGEAVDFLVNHAPQAIAELVQFGVSFDR 103
>sp|P65499|NADB_MYCTU L-aspartate oxidase OS=Mycobacterium tuberculosis GN=nadB PE=3 SV=1 Length = 527
Score = 86.3 bits (212), Expect = 1e-16 Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 3/110 (2%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCG-TVAIITKA-EPHETNTSYAQGGVSAVL-DPLDSVENH 517 D VVIG+G+AGL AL + G +V +++KA + H T T YAQGG++ VL D DSV+ H Sbjct: 11 DVVVIGTGVAGLAAALAADRAGRSVVVLSKAAQTHVTATHYAQGGIAVVLPDNDDSVDAH 70
Query: 518 IRDTIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDGRLHLAR 667 + DT+ AGA LCD +AV + +G V +L+ GA D+ GR L R Sbjct: 71 VADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTR 120
>sp|P65500|NADB_MYCBO L-aspartate oxidase OS=Mycobacterium bovis GN=nadB PE=3 SV=1 Length = 527
Score = 86.3 bits (212), Expect = 1e-16 Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 3/110 (2%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCG-TVAIITKA-EPHETNTSYAQGGVSAVL-DPLDSVENH 517 D VVIG+G+AGL AL + G +V +++KA + H T T YAQGG++ VL D DSV+ H Sbjct: 11 DVVVIGTGVAGLAAALAADRAGRSVVVLSKAAQTHVTATHYAQGGIAVVLPDNDDSVDAH 70
Query: 518 IRDTIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDGRLHLAR 667 + DT+ AGA LCD +AV + +G V +L+ GA D+ GR L R Sbjct: 71 VADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTR 120
>sp|P10902|NADB_ECOLI L-aspartate oxidase OS=Escherichia coli (strain K12) GN=nadB PE=1 SV=4 Length = 540
Score = 85.5 bits (210), Expect = 2e-16 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 5/112 (4%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 526 D ++IGSG AGL AL +A V +++K E +T YAQGG++AV D DS+++H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVED 69
Query: 527 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAR 667 T++AGA +CD AVE V V+ LI G FD GE+ HL R Sbjct: 70 TLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEES-YHLTR 120
>sp|Q8XA23|NADB_ECO57 L-aspartate oxidase OS=Escherichia coli O157:H7 GN=nadB PE=3 SV=1 Length = 540
Score = 85.5 bits (210), Expect = 2e-16 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 5/112 (4%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 526 D ++IGSG AGL AL +A V +++K E +T YAQGG++AV D DS+++H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVED 69
Query: 527 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAR 667 T++AGA +CD AVE V V+ LI G FD GE+ HL R Sbjct: 70 TLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEES-YHLTR 120
>sp|Q51363|NADB_PSEAE L-aspartate oxidase OS=Pseudomonas aeruginosa GN=nadB PE=3 SV=1 Length = 538
Score = 85.1 bits (209), Expect = 3e-16 Identities = 44/99 (44%), Positives = 63/99 (63%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 526 D +VIGSG AGL AL + + +A+++K E + +T +AQGGV+AVLD D+VE+H+ D Sbjct: 8 DVLVIGSGAAGLSLALTLPEHLRIAVLSKGELSQGSTYWAQGGVAAVLDDTDTVESHVED 67
Query: 527 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGE 643 T+VAG LC E+AV E ++ LI G F + E Sbjct: 68 TLVAGGGLCREDAVRFTVEHSREAIQWLIEQGVPFTRDE 106
>sp|Q8ZMX9|NADB_SALTY L-aspartate oxidase OS=Salmonella typhimurium GN=nadB PE=3 SV=1 Length = 540
Score = 84.7 bits (208), Expect = 4e-16 Identities = 43/96 (44%), Positives = 60/96 (62%) Frame = +2
Query: 347 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 526 D ++IGSG AGL AL +A+ V +++K E +T YAQGG++AV D DS+ +H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLAEKHKVIVLSKGPVSEGSTFYAQGGIAAVFDETDSIASHVED 69
Query: 527 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD 634 T++AGA +CD AVE V V+ LI G FD Sbjct: 70 TLIAGAGICDRHAVEFVASNARTCVQWLIDQGVLFD 105
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TS37 |
Definition |
tr|A9TS37|A9TS37_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
157 |
Score (bit) |
197.0 |
E-value |
5.0e-49 |
Report |
|