DK959342
Clone id TST39A01NGRL0004_G21
Library
Length 405
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_G21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTGAAAAGGGAAGCAAAACCTCACCGATAAGTCAACCTGACTCTTACAACGAAAGGAAGG
TGAATAGCTGGCTAGGTAGCCCGAATTATGCAAATGGGAACAATGCGGACATCTTGCAAG
TGTTCGAACAGGGAATAGAGAGATTGTCTAGTACCGAATCTCCTCTGATTAGTCATTCTG
ACGGTGGTGTGAAGTGTGATAATTTCACTTTGGAACCTATTCAGTAGGCCTTCAAGGCAT
TTCCGGAGACTGTTCTTGTGAGAGCTTCGATCAAATGTATCAGCAGCCATGTCAGCATAA
GAGTGGTAACACCAGAGTATGTTTGTTTCTCTGATAGTGAGTTATGTACCATGAGAACAA
ATCGAATGACTTTAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8LDQ4
Definition sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana
Align length 55
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959342|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_G21, 5'
(377 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidops... 31 1.7
sp|P36304|POLR_KYMVJ RNA replicase polyprotein OS=Kennedya yello... 30 3.7
sp|Q5AEN1|CCPR_CANAL Cytochrome c peroxidase, mitochondrial OS=C... 30 4.8
sp|Q7BCK4|ICSA_SHIFL Outer membrane protein icsA OS=Shigella fle... 29 6.3
sp|Q2RWU7|Y594_RHORT UPF0191 membrane protein Rru_A0594 OS=Rhodo... 29 8.3
sp|Q9LPK3|Y1158_ARATH Putative zinc finger CCCH domain-containin... 29 8.3
sp|Q54970|POXB_STRPN Pyruvate oxidase OS=Streptococcus pneumonia... 29 8.3
sp|Q5PR68|CCD46_MOUSE Coiled-coil domain-containing protein 46 O... 29 8.3

>sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis
thaliana GN=TAP46 PE=1 SV=2
Length = 405

Score = 31.2 bits (69), Expect = 1.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3

Query: 36 PDSYNERKVNSWLGSPNYANGNNADILQVFEQGIERLSSTESPLISHSDGGVKCD 200
PD +E + +WL S N A D+L++ ++ E LS+ + + +GG D
Sbjct: 182 PDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRD 236


>sp|P36304|POLR_KYMVJ RNA replicase polyprotein OS=Kennedya yellow
mosaic virus (strain Jervis bay) PE=3 SV=1
Length = 1874

Score = 30.0 bits (66), Expect = 3.7
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1

Query: 281 DTFDRSSHKNSLRKCLEG-LLNRFQSEIITLHTTVRMTNQRRFGTRQSLYSLFEHLQDVR 105
++F S H + K LE LL + T ++V ++F Q F+HL + R
Sbjct: 58 NSFGSSPHPHPAHKTLETHLLFTHWMHLCTQPSSVLFMKPQKFMKLQRKNKFFQHLHNYR 117

Query: 104 IVPICIIRAT*PAIHLP 54
+ P +R + HLP
Sbjct: 118 LTPTDSVRFPSTSPHLP 134


>sp|Q5AEN1|CCPR_CANAL Cytochrome c peroxidase, mitochondrial
OS=Candida albicans GN=CCP1 PE=3 SV=1
Length = 366

Score = 29.6 bits (65), Expect = 4.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3

Query: 147 TISLFPVRTLARCPHCSHLHNSGYLASYSPSF 52
T++L L RC H HNSGY + PSF
Sbjct: 240 TVALLGAHVLGRC----HKHNSGYDGPWGPSF 267


>sp|Q7BCK4|ICSA_SHIFL Outer membrane protein icsA OS=Shigella
flexneri GN=icsA PE=1 SV=1
Length = 1102

Score = 29.3 bits (64), Expect = 6.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2

Query: 337 LSEKQTYSGVTTLMLTWLLIHLIEALTRT 251
L+EK TYSG T + L + +EA+TRT
Sbjct: 537 LAEKNTYSGFTNINAGILKMGTVEAMTRT 565


>sp|Q2RWU7|Y594_RHORT UPF0191 membrane protein Rru_A0594
OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
GN=Rru_A0594 PE=3 SV=1
Length = 208

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -2

Query: 370 VIRFVLMVHNSLSEKQTYSGVTTLMLTWLLIHLIEALTRTVSGNA 236
V+ ++LMV LSE ++G+ L+L + L+ A+ R SG A
Sbjct: 165 VLHYMLMVKADLSEPLIFAGILGLLLA---VRLVPAVRRRRSGRA 206


>sp|Q9LPK3|Y1158_ARATH Putative zinc finger CCCH domain-containing
protein At1g21580 OS=Arabidopsis thaliana GN=At1g21580
PE=1 SV=1
Length = 2123

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +3

Query: 3 EKGSKTSPISQPDSYNERKVNSWLGSPNYANGNNADILQVFEQGIERLSSTESPLISHSD 182
+K S + P SY + N W N+ NGN +G E L ++ L+
Sbjct: 316 QKKSALLRLETPRSYKNSRENEWSRQHNHHNGNGKRFNSNSYRGKEHLGHSDRGLVEKQR 375

Query: 183 G 185
G
Sbjct: 376 G 376


>sp|Q54970|POXB_STRPN Pyruvate oxidase OS=Streptococcus pneumoniae
GN=spxB PE=3 SV=2
Length = 591

Score = 28.9 bits (63), Expect = 8.3
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3

Query: 3 EKGSKTSPISQPDSYNERKVNSWLGSPNYANGNNADILQVFE--QGIERLSSTESPLISH 176
+KG I + E NS+ GS +Y A L E + +E L++ E P+I
Sbjct: 154 KKGPAVVEIPVNFGFQEIDENSYYGSGSYERSFIAPALNEVEIDKAVEILNNAERPVIYA 213

Query: 177 SDGGVKCDNFTLE 215
GGVK E
Sbjct: 214 GFGGVKAGEVITE 226


>sp|Q5PR68|CCD46_MOUSE Coiled-coil domain-containing protein 46
OS=Mus musculus GN=Ccdc46 PE=2 SV=2
Length = 954

Score = 28.9 bits (63), Expect = 8.3
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3

Query: 3 EKGSKTSPISQPDSYNERKVNSW---LGSPNYANGNNADILQVFEQGIERLSST 155
E SKTSPIS DS E ++NSW + +P Y + + +G R +S+
Sbjct: 188 EVHSKTSPISLDDSDIEVRLNSWNLGIENPRYLRQKPLPVSLMTPKGSLRKASS 241


tr_hit_id A5G3X4
Definition tr|A5G3X4|A5G3X4_GEOUR Cysteine desulfurase family protein OS=Geobacter uraniireducens (strain Rf4)
Align length 62
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959342|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_G21, 5'
(377 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5G3X4|A5G3X4_GEOUR Cysteine desulfurase family protein OS=Ge... 35 1.4
tr|B7XMB7|B7XMB7_9MICR Tubulin gamma chain OS=Enterocytozoon bie... 33 7.0
tr|B7XI56|B7XI56_9MICR Tubulin gamma chain OS=Enterocytozoon bie... 33 7.0
tr|A1ZWB6|A1ZWB6_9SPHI Serine/threonine protein kinases, putativ... 33 9.2
tr|Q011D4|Q011D4_OSTTA Chromosome 09 contig 1, DNA sequence OS=O... 33 9.2

>tr|A5G3X4|A5G3X4_GEOUR Cysteine desulfurase family protein
OS=Geobacter uraniireducens (strain Rf4) GN=Gura_2313
PE=4 SV=1
Length = 380

Score = 35.4 bits (80), Expect = 1.4
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3

Query: 9 GSKTSPISQPDSYNERKVNSWLGSPNYANGNNADILQVFEQGIERLSSTESPLISHSDGG 188
GS +S + QPD ER + + +P A G A I + E G+ER+ E+ L+S G
Sbjct: 228 GSFSSELGQPDVLPERYESGTMNTPGIA-GLKAGIEFILETGLERIRQKETVLVSQLLHG 286

Query: 189 VK 194
+K
Sbjct: 287 LK 288


>tr|B7XMB7|B7XMB7_9MICR Tubulin gamma chain OS=Enterocytozoon
bieneusi H348 GN=EBI_22249 PE=4 SV=1
Length = 399

Score = 33.1 bits (74), Expect = 7.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +3

Query: 63 NSWLGSPNYANGNNADILQVFEQGIERLSSTESPLISHSDGGVKCDNFTLEPIQ*AFKAF 242
N+W + A ++ DIL + + +E ++ E+ I HS G F+ + F
Sbjct: 83 NNWAHGYSLAKTHSDDILDIINRTVEACNNIEAFQIFHSCAGGTGSGFSSFLAETLTDMF 142

Query: 243 PETVLVRASIKCISSHVSIRVVTP 314
P+ VLV SI + S VV P
Sbjct: 143 PKKVLVNFSILPNNKETSDVVVQP 166


>tr|B7XI56|B7XI56_9MICR Tubulin gamma chain OS=Enterocytozoon
bieneusi H348 GN=EBI_26023 PE=4 SV=1
Length = 399

Score = 33.1 bits (74), Expect = 7.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +3

Query: 63 NSWLGSPNYANGNNADILQVFEQGIERLSSTESPLISHSDGGVKCDNFTLEPIQ*AFKAF 242
N+W + A ++ DIL + + +E ++ E+ I HS G F+ + F
Sbjct: 83 NNWAHGYSLAKTHSDDILDIINRTVEACNNIEAFQIFHSCAGGTGSGFSSFLAETLTDMF 142

Query: 243 PETVLVRASIKCISSHVSIRVVTP 314
P+ VLV SI + S VV P
Sbjct: 143 PKKVLVNFSILPNNKETSDVVVQP 166


>tr|A1ZWB6|A1ZWB6_9SPHI Serine/threonine protein kinases, putative
OS=Microscilla marina ATCC 23134 GN=M23134_04535 PE=4
SV=1
Length = 836

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3

Query: 27 ISQPDSYNERKVNSWLGSPNYANGNNADILQVFEQGIERLSSTES 161
+++P + ++ ++LG+ Y +GNN L V E+ IE SS ++
Sbjct: 275 MTEPQEIKQAEIYNYLGANYYLSGNNPQALNVVEKAIEIASSKKA 319


>tr|Q011D4|Q011D4_OSTTA Chromosome 09 contig 1, DNA sequence
OS=Ostreococcus tauri GN=Ot09g03370 PE=3 SV=1
Length = 371

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3

Query: 84 NYANGNNADILQVFEQGIERLSSTESPLISHSDGGVKCDNFTLEPIQ*A--FKAFPET 251
N N D + + IE LSS++ P ++ S C + T+ PI+ A FKAFP T
Sbjct: 304 NAITHNRVDKISATHRHIEMLSSSQGPPVNDSISIASCISSTVIPIRSAALFKAFPIT 361