DK959372
Clone id TST39A01NGRL0004_I05
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_I05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTCTATAAAGAGGCCAAGCAATTAAGATGTCTAGTTGTGGAAATTCAAACTGTAGCTGCG
GCTCTTCGTGCTCGTGTGGAGGTGGCTGCAAATGCGGCAAGAGGACCTCTGATATAATGG
ATGCTTCTATATTCGAGTGCAGCATGCCGAGGACAGAAAGATCGATCATGGCATGCACTT
GGATCACTGCCGGATTCCAGTATTACCTGGATGGGCCTTCTCCTTTTCCAGATTAAAGAA
ACACTGCCTTTTCACACCCTTCTACTATTATAGGGACCGCCCTCAGCATCGTCCGACGCC
TTGTTACTACGTTAGAATAAGCGCAGATTCAAAAATCTGCCTTCTCAATAACCCACGTGG
CAACGCTTCGTTTCCTACTTGTACATATATATATATATATATATGCAAATCCGGACATAC
CAGTAGAAATTTCCGAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q68DU8
Definition sp|Q68DU8|KCD16_HUMAN BTB/POZ domain-containing protein KCTD16 OS=Homo sapiens
Align length 67
Score (bit) 30.0
E-value 4.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959372|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_I05, 5'
(435 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q68DU8|KCD16_HUMAN BTB/POZ domain-containing protein KCTD16 O... 30 4.3
sp|Q96I34|PP16A_HUMAN Protein phosphatase 1 regulatory subunit 1... 29 7.3

>sp|Q68DU8|KCD16_HUMAN BTB/POZ domain-containing protein KCTD16
OS=Homo sapiens GN=KCTD16 PE=2 SV=1
Length = 428

Score = 30.0 bits (66), Expect = 4.3
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2

Query: 113 YNGCFYIRVQHAE---DRKIDHGMHLDHCRIPVLPGWAFSFSRLKKHCLFTPFYYYRDRP 283
Y FY++ +H E D + G H+ C V + ++ K +T + +YR+
Sbjct: 222 YTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYREPS 281

Query: 284 QHRPTPC 304
+ P+ C
Sbjct: 282 RWSPSHC 288


>sp|Q96I34|PP16A_HUMAN Protein phosphatase 1 regulatory subunit 16A
OS=Homo sapiens GN=PPP1R16A PE=1 SV=1
Length = 528

Score = 29.3 bits (64), Expect = 7.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2

Query: 221 RRPIQVILESGSDPSACHDRSFCPRHAALEYRSIHYI 111
R +Q +LE+G++ +AC + P HAA +H +
Sbjct: 117 REMVQQLLEAGANINACDSECWTPLHAAATCGHLHLV 153


tr_hit_id Q6VZW7
Definition tr|Q6VZW7|Q6VZW7_CNPV CNPV030 ankyrin repeat protein OS=Canarypox virus
Align length 58
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959372|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_I05, 5'
(435 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6VZW7|Q6VZW7_CNPV CNPV030 ankyrin repeat protein OS=Canarypo... 34 4.2
tr|A7QZA2|A7QZA2_VITVI Chromosome undetermined scaffold_268, who... 33 9.3
tr|Q28YC0|Q28YC0_DROPS GA13232 OS=Drosophila pseudoobscura pseud... 33 9.3
tr|B6PRX3|B6PRX3_BRAFL Putative uncharacterized protein (Fragmen... 33 9.3
tr|B4GD57|B4GD57_DROPE GL11700 OS=Drosophila persimilis GN=GL117... 33 9.3

>tr|Q6VZW7|Q6VZW7_CNPV CNPV030 ankyrin repeat protein OS=Canarypox
virus GN=CNPV030 PE=4 SV=1
Length = 340

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2

Query: 272 YNSRRV*KGSVSLIWKRRRPIQVILESGSDPSACHDRSFCPRHAALEYRSIHYIRGPL 99
YN + + + K+R+ + +L G+DP+ S+CP H A+ S+ IR L
Sbjct: 20 YNKNGYTRLYIEVAMKKRKNVDRLLYLGADPNLASADSYCPLHIAVRNGSLKIIRSLL 77


>tr|A7QZA2|A7QZA2_VITVI Chromosome undetermined scaffold_268, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00010560001 PE=4 SV=1
Length = 256

Score = 32.7 bits (73), Expect = 9.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2

Query: 161 IDHGMHLDHCRIPVLPGWAFSFSRLKKHCLFTPFYYYRDRP 283
ID ++ HC ++P W FS K+ ++TP ++ P
Sbjct: 213 IDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSTSHP 253


>tr|Q28YC0|Q28YC0_DROPS GA13232 OS=Drosophila pseudoobscura
pseudoobscura GN=GA13232 PE=4 SV=2
Length = 267

Score = 32.7 bits (73), Expect = 9.3
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = +2

Query: 197 PVLPGWAFSFSRLKKHCLFTPFYYYRDRPQHRPTPCYYVRISADSKICLLNNPRGNASFP 376
P PG SFS L L+T FY +RD RP P Y+ + + LN
Sbjct: 74 PPYPGAVVSFSYLMTLFLYTCFYMWRD--WRRPAPYSYLVLLLSTATSSLNRSFYLMYLA 131

Query: 377 TCTYIYIY 400
T +IY Y
Sbjct: 132 TSHWIYAY 139


>tr|B6PRX3|B6PRX3_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_110231 PE=4 SV=1
Length = 103

Score = 32.7 bits (73), Expect = 9.3
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2

Query: 269 YRDRPQHRPTPCYYVRISADSKICLLNNPRGNASFPTCTYIY 394
++ PQ +P C+ +CL NP+ + P C+Y++
Sbjct: 45 FQTNPQIQPNMCFQTNPQIQPNMCLNTNPQIQSDMPDCSYLH 86


>tr|B4GD57|B4GD57_DROPE GL11700 OS=Drosophila persimilis GN=GL11700
PE=4 SV=1
Length = 267

Score = 32.7 bits (73), Expect = 9.3
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = +2

Query: 197 PVLPGWAFSFSRLKKHCLFTPFYYYRDRPQHRPTPCYYVRISADSKICLLNNPRGNASFP 376
P PG SFS L L+T FY +RD RP P Y+ + + LN
Sbjct: 74 PPYPGAVVSFSYLMTLFLYTCFYMWRD--WRRPAPYSYLVLLLSTATSSLNRSFYLMYLA 131

Query: 377 TCTYIYIY 400
T +IY Y
Sbjct: 132 TSHWIYAY 139