DK959387 |
Clone id |
TST39A01NGRL0004_I20 |
Library |
TST39 |
Length |
654 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_I20. 5' end sequence. |
Accession |
DK959387 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL21Contig1 |
Sequence |
CTTGTTCACAAGCACCGTCATACACACACATACAGGCCTCTAACACCCGCAGTGCAGGCC AGAGCTCCTCTGTCTTCTCCATCTCTCCTTTTTGAATCGTGCAGGAATGGCTAGCAATGG AGTTGTGACTGTCTATGGCAATGGTGCCATCTCTGATCCCAAGAAGTCATCTTATGCAGT CAAGGTGGGTCTTGCTCAGATGCTCCGAGGAGGTGTTATTATGGATGTTGTGAATGCAGA GCAGGCTCGAATTGCGGAAGAGGCAGGCGCTACTGCCGTAATGGCCCTCGAACGTGTGCC TGCGGACATCAGGGCTGAGGGTGGTGTGGCTCTCATGAGTGATCCTGGTTTGATCAAGGA GATCAAGAATGCTGTCACTATTCCTGTGATGGCCAAAGCCAGAATTGGGCATTTTGTGGA AGCGCAGGTACTTGAGGCCATTGGTGTGGATTACATTGATGAGAGTGAGGTCCTTACCCC AGCGGATGATGTGAACCACATCAACAAGCACAACTTTCGTATTCCTTTTGTTTGTGGCTG CCGCAACCTAGGTGAAGCTTTAAGAAGGATTGCAGAGGGGGCTGCAATGATCAGGACCAA NGGAGAAGCAGGGACTGGCAATGTGGTTGAAACTGTGAGGCACGTGCGCTCTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
182 |
Score (bit) |
328.0 |
E-value |
1.0e-89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q45FF0 |
Definition |
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max |
Align length |
181 |
Score (bit) |
307.0 |
E-value |
3.0e-82 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959387|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_I20, 5' (654 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 307 3e-82 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 306 5e-82 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 305 1e-81 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 303 5e-81 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 301 3e-80 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 299 9e-80 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 296 6e-79 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 295 2e-78 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 294 3e-78 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 294 3e-78 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 294 4e-78 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 292 1e-77 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 291 3e-77 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 291 3e-77 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 287 4e-76 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 282 1e-74 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 276 1e-72 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 276 1e-72 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 276 1e-72 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 275 2e-72 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 273 5e-72 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 273 7e-72 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 273 7e-72 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 273 9e-72 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 273 9e-72 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 272 1e-71 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 271 2e-71 tr|A6R037|A6R037_AJECN Pyridoxal biosynthesis lyase pdxS OS=Ajel... 270 4e-71 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 269 1e-70 tr|A8NFX3|A8NFX3_COPC7 Putative uncharacterized protein OS=Copri... 269 1e-70
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 307 bits (787), Expect = 3e-82 Identities = 154/181 (85%), Positives = 168/181 (92%) Frame = +2
Query: 110 ASNGVVTVYGNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMAL 289 + +GVVTVYGNGAI++ KKS ++VKVGLAQMLRGGVIMDVV+AEQARIAEEAGA AVMAL Sbjct: 4 SGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMAL 63
Query: 290 ERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESE 469 ERVPADIRA+GGVA MSDP LI +IK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESE Sbjct: 64 ERVPADIRAQGGVARMSDPQLINDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 123
Query: 470 VLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVETVRHVR 649 VLT ADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRT GEAGTGN++E VRHVR Sbjct: 124 VLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVR 183
Query: 650 S 652 S Sbjct: 184 S 184
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 306 bits (785), Expect = 5e-82 Identities = 156/183 (85%), Positives = 170/183 (92%), Gaps = 1/183 (0%) Frame = +2
Query: 107 MASNGVVTVYGNGAISDP-KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 283 MA +GVVT+YGNGA+++ K+S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA AVM Sbjct: 1 MAGSGVVTLYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60
Query: 284 ALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 463 ALERVPADIRA+GGVA MSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
Query: 464 SEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVETVRH 643 SEVLT ADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRT GEAGTGN++E VRH Sbjct: 121 SEVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180
Query: 644 VRS 652 VRS Sbjct: 181 VRS 183
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 305 bits (782), Expect = 1e-81 Identities = 157/183 (85%), Positives = 169/183 (92%), Gaps = 1/183 (0%) Frame = +2
Query: 107 MASNGVVTVYGNGA-ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 283 M +GVVTVYGNGA I++ KKS ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVM Sbjct: 1 MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
Query: 284 ALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 463 ALERVPADIRA+GGVA MSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120
Query: 464 SEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVETVRH 643 SEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRR+ EGAAMIRT GEAGTGN+VE VRH Sbjct: 121 SEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIVEAVRH 180
Query: 644 VRS 652 VRS Sbjct: 181 VRS 183
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 303 bits (777), Expect = 5e-81 Identities = 161/188 (85%), Positives = 169/188 (89%), Gaps = 6/188 (3%) Frame = +2
Query: 107 MASNGVVTVY---GNGAI--SDPKKS-SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAG 268 M NGVV +Y GNG + ++ KKS SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAG Sbjct: 1 MEGNGVVAIYRNNGNGLLENNNSKKSVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAG 60
Query: 269 ATAVMALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGV 448 A AVMALERVPADIRAEGGVA MSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGV Sbjct: 61 AVAVMALERVPADIRAEGGVARMSDPAMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGV 120
Query: 449 DYIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVV 628 DYIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRT GEAGTGNVV Sbjct: 121 DYIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVV 180
Query: 629 ETVRHVRS 652 E VRH RS Sbjct: 181 EAVRHTRS 188
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 301 bits (770), Expect = 3e-80 Identities = 158/187 (84%), Positives = 163/187 (87%), Gaps = 5/187 (2%) Frame = +2
Query: 107 MASNGVVTVYGNGAIS-----DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 271 M NGVV VY N + K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGNGVVAVYHNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDAAQARIAEEAGA 60
Query: 272 TAVMALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 451 AVMALERVPADIRAEGGVA MSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVD Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVD 120
Query: 452 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVE 631 YIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRT GEAGTGNVVE Sbjct: 121 YIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVE 180
Query: 632 TVRHVRS 652 VRH RS Sbjct: 181 AVRHTRS 187
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 299 bits (766), Expect = 9e-80 Identities = 153/187 (81%), Positives = 168/187 (89%), Gaps = 5/187 (2%) Frame = +2
Query: 107 MASNGVVTVYGNGAISDP-----KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 271 M +GVVTVYGNGA+++ K S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA Sbjct: 1 MEGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 60
Query: 272 TAVMALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 451 AVMALERVPADIRA+GGVA MSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LE++G+D Sbjct: 61 CAVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGID 120
Query: 452 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVE 631 Y+DESEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRT GEAGTGN++E Sbjct: 121 YVDESEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIE 180
Query: 632 TVRHVRS 652 VRHVRS Sbjct: 181 AVRHVRS 187
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 296 bits (759), Expect = 6e-79 Identities = 149/185 (80%), Positives = 165/185 (89%), Gaps = 6/185 (3%) Frame = +2
Query: 116 NGVVTVYGNGAIS------DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYGN + PK S+++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGNNGAALLEPPKQPKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 278 VMALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVA MSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVETV 637 DESEVLTPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMIRT GEAGTGNVVE V Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKGEAGTGNVVEAV 185
Query: 638 RHVRS 652 RHVRS Sbjct: 186 RHVRS 190
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 295 bits (754), Expect = 2e-78 Identities = 155/186 (83%), Positives = 162/186 (87%), Gaps = 4/186 (2%) Frame = +2
Query: 107 MASNGVVTVYGNGA----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAT 274 M N VV V NG+ + K SYAVKVGLAQMLRGGVIMDVV+ QARIAEEAGA Sbjct: 1 MEENRVVAVLNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDVAQARIAEEAGAV 60
Query: 275 AVMALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDY 454 AVMALERVPADIRAEGGVA MSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY Sbjct: 61 AVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVDY 120
Query: 455 IDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVET 634 IDESEVLTPADDV+HINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRT GEAGTGNVVE Sbjct: 121 IDESEVLTPADDVHHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVVEA 180
Query: 635 VRHVRS 652 VRH RS Sbjct: 181 VRHTRS 186
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 294 bits (753), Expect = 3e-78 Identities = 150/185 (81%), Positives = 166/185 (89%), Gaps = 6/185 (3%) Frame = +2
Query: 116 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 278 VMALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVA MSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVETV 637 DESEVLTPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMIRT GEAGTGNVVE V Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKGEAGTGNVVEAV 185
Query: 638 RHVRS 652 RHVRS Sbjct: 186 RHVRS 190
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 294 bits (753), Expect = 3e-78 Identities = 150/185 (81%), Positives = 166/185 (89%), Gaps = 6/185 (3%) Frame = +2
Query: 116 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 69 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 128
Query: 278 VMALERVPADIRAEGGVALMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVA MSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 129 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 188
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTXGEAGTGNVVETV 637 DESEVLTPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMIRT GEAGTGNVVE V Sbjct: 189 DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKGEAGTGNVVEAV 248
Query: 638 RHVRS 652 RHVRS Sbjct: 249 RHVRS 253
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