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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959394
Clone id TST39A01NGRL0004_J04
Library
Length 671
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_J04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACACACACACACCTCCCTACGTTTCCTAGTCCCTCTTCCCTATACACCTCTTTTCGTCC
CTGTTAACCTCCCCTTGATGAAAAAAAAAAGCACAGCACTTATGCACTTCATTTCTCACC
TTTCTCTCCACAGTTTTCTCCCTTTCTTAGACCCTTTTGCTCAAGTAACCCCTGCCTCCA
CCCTTTCCTTTTTGGGTATTCTCTAACCCACCCTCAATCTCATGAGTGCATGCGCATGTA
TGTGCGCGCACACCCCCCCCCCCAAGAAGCATCACAATTGATCGCCTCGTTCTTATCCCC
CTACGAGATGTAGCATTTTCTTGTTGATTTTCATCTCCTTTCTTTGGTTAAGTCTGTTGT
TAGAATTGATTGATTGATTATTAAGTTTCCCAGTCCACCATCCTTACAAGCATGCAAGCT
GCTGGGCAATATGGGGAAGTTCCCCAGTATGTGGCCAGCAGAGTGGGTGCATCACATGGG
CACTTGTTCAACCTCTCCCACGACATGTCGCTCTCATCATCGTCCGCGACACCCGGGCAA
GCACATGCCCATGGCCATGGCCTCTCTCTTTCTCATCCACCTGCACACACTCAAGCATCT
CAATCACACATTACATCCGCGTCGACACAGCCATCGTTTTTGCAATCCCAGCATCAACAG
CAACATGTACA
■■Homology search results ■■ -
sp_hit_id Q98CZ2
Definition sp|Q98CZ2|UREE_RHILO Urease accessory protein ureE OS=Rhizobium loti
Align length 48
Score (bit) 30.8
E-value 6.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959394|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_J04, 5'
         (671 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q98CZ2|UREE_RHILO Urease accessory protein ureE OS=Rhizobium ...    31   6.8  
sp|Q9UJQ4|SALL4_HUMAN Sal-like protein 4 OS=Homo sapiens GN=SALL...    31   6.8  
sp|Q00130|VG50_ICHV1 Uncharacterized gene 50 protein OS=Ictaluri...    30   8.8  
sp|Q5RBQ5|PLA1A_PONAB Phospholipase A1 member A OS=Pongo abelii ...    30   8.8  
sp|Q53H76|PLA1A_HUMAN Phospholipase A1 member A OS=Homo sapiens ...    30   8.8  
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic O...    30   8.8  
sp|Q32KJ9|ARSG_RAT Arylsulfatase G OS=Rattus norvegicus GN=Arsg ...    30   8.8  

>sp|Q98CZ2|UREE_RHILO Urease accessory protein ureE OS=Rhizobium
           loti GN=ureE PE=3 SV=1
          Length = 196

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +1

Query: 466 GASHGHLFNLSHDMXXXXXXATPGQAHAHGHGLSLSHPPAHTQASQSH 609
           G  HGH    SH            +AH+H HG S SH  +H+     H
Sbjct: 156 GHDHGHAHAHSH-----------AEAHSHAHGESHSHSHSHSHDDHHH 192


>sp|Q9UJQ4|SALL4_HUMAN Sal-like protein 4 OS=Homo sapiens GN=SALL4
           PE=1 SV=1
          Length = 1053

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -1

Query: 146 EREKTVERKVRNEVH---KCCAFFFHQGEVNRDEKRC 45
           E E TV+R  R E H   KCCA FF   E    +K C
Sbjct: 58  EDEATVKRLRREETHVCEKCCAEFFSISEFLEHKKNC 94


>sp|Q00130|VG50_ICHV1 Uncharacterized gene 50 protein OS=Ictalurid
           herpesvirus 1 GN=50 PE=4 SV=1
          Length = 670

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 19/59 (32%), Positives = 21/59 (35%)
 Frame = +1

Query: 406 TSMQAAGQYGEVPQYVASRVGASHGHLFNLSHDMXXXXXXATPGQAHAHGHGLSLSHPP 582
           T+ + AG  G V    A   GA HGH     H              H HGHG     PP
Sbjct: 614 TTAKPAGANGTVTTTTAKPAGAGHGHGHGHGH-------------GHGHGHGHGGRGPP 659


>sp|Q5RBQ5|PLA1A_PONAB Phospholipase A1 member A OS=Pongo abelii
           GN=PLA1A PE=2 SV=2
          Length = 456

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 173 CLHPFLFGYSLTHPQSHECMRMYVRAHPPPQEAS-QLIASFLSPYEM*HFLVDFHLLSL 346
           C +PFL    L+ P+     +  V+  P P+E    L+ +  +PY M H LV+FHL  L
Sbjct: 296 CFNPFL----LSCPRIGLVEQGGVKIEPLPKEVKVYLLTTSSAPYCMHHSLVEFHLKEL 350


>sp|Q53H76|PLA1A_HUMAN Phospholipase A1 member A OS=Homo sapiens
           GN=PLA1A PE=2 SV=2
          Length = 456

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 173 CLHPFLFGYSLTHPQSHECMRMYVRAHPPPQEAS-QLIASFLSPYEM*HFLVDFHLLSL 346
           C +PFL    L+ P+     +  V+  P P+E    L+ +  +PY M H LV+FHL  L
Sbjct: 296 CFNPFL----LSCPRIGLVEQGGVKIEPLPKEVKVYLLTTSSAPYCMHHSLVEFHLKEL 350


>sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic
           OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2
          Length = 389

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 15/40 (37%), Positives = 15/40 (37%)
 Frame = +1

Query: 469 ASHGHLFNLSHDMXXXXXXATPGQAHAHGHGLSLSHPPAH 588
           A H H     HD          G AHAHGHG    H   H
Sbjct: 183 AHHRHSHPPGHDSCEGHSKIDIGHAHAHGHGHGHGHGHVH 222


>sp|Q32KJ9|ARSG_RAT Arylsulfatase G OS=Rattus norvegicus GN=Arsg
           PE=2 SV=1
          Length = 526

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +2

Query: 398 PSLQACKLLGNMGKFPSMWPAEWVHHMGTCSTSPTTCRSHHR 523
           P  Q C+L G+MG F  +W      H G      TT    HR
Sbjct: 305 PWAQKCELAGSMGPFSGLWQT----HQGGSPAKQTTWEGGHR 342
tr_hit_id B3M618
Definition tr|B3M618|B3M618_DROAN GF20053 OS=Drosophila ananassae
Align length 77
Score (bit) 40.4
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959394|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_J04, 5'
         (671 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3M618|B3M618_DROAN GF20053 OS=Drosophila ananassae GN=GF2005...    40   0.10 
tr|A6C5N7|A6C5N7_9PLAN Putative uncharacterized protein OS=Planc...    37   1.1  
tr|Q9VWM5|Q9VWM5_DROME CG7406 OS=Drosophila melanogaster GN=CG74...    35   5.6  
tr|B6HL50|B6HL50_PENCH Pc21g03410 protein OS=Penicillium chrysog...    35   5.6  
tr|B8NXL5|B8NXL5_ASPFL CDF zinc transporter (Msc2), putative OS=...    34   7.3  
tr|A4RBH7|A4RBH7_MAGGR Putative uncharacterized protein OS=Magna...    34   7.3  
tr|B4L0Z9|B4L0Z9_DROMO GI13077 OS=Drosophila mojavensis GN=GI130...    34   9.5  
tr|B3M9K4|B3M9K4_DROAN GF25091 OS=Drosophila ananassae GN=GF2509...    34   9.5  

>tr|B3M618|B3M618_DROAN GF20053 OS=Drosophila ananassae GN=GF20053
           PE=4 SV=1
          Length = 161

 Score = 40.4 bits (93), Expect = 0.10
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +1

Query: 391 QSTILTSMQAAGQYGEVPQYVASRVGASHG-HLFNLSHDMXXXXXXATPGQAHAHGHGLS 567
           Q T+L + Q     G VP +   +VG  H  HL +  H+M            H HGH  +
Sbjct: 9   QPTLLEASQ-----GHVPHHHGHQVGVQHSSHLPHSGHNMPSPPTAHNHHHGHGHGHSSA 63

Query: 568 LSHPPAHTQASQSHITS 618
             H   H Q+  +H TS
Sbjct: 64  AHHSHPHKQSKDTHHTS 80


>tr|A6C5N7|A6C5N7_9PLAN Putative uncharacterized protein
           OS=Planctomyces maris DSM 8797 GN=PM8797T_18609 PE=4
           SV=1
          Length = 229

 Score = 37.0 bits (84), Expect = 1.1
 Identities = 25/79 (31%), Positives = 34/79 (43%)
 Frame = +1

Query: 400 ILTSMQAAGQYGEVPQYVASRVGASHGHLFNLSHDMXXXXXXATPGQAHAHGHGLSLSHP 579
           IL S+Q   ++     + A  V  SH H  N SH           G  H+H HG S SH 
Sbjct: 42  ILQSLQVQVEH----THSAGNVDHSHSHGHNHSH-----------GHGHSHSHGHSHSHG 86

Query: 580 PAHTQASQSHITSASTQPS 636
            +H+ + Q H  S  +  S
Sbjct: 87  HSHSHSHQGHAHSPQSAAS 105


>tr|Q9VWM5|Q9VWM5_DROME CG7406 OS=Drosophila melanogaster GN=CG7406
           PE=2 SV=1
          Length = 168

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
 Frame = +1

Query: 421 AGQYGEVPQYVA-----SRVGASHGHLFNLSH----DMXXXXXXATPGQAHAHGHGLSLS 573
           +G Y   P+ V      S  G SHGH +  SH    D+         G +H HGHG   S
Sbjct: 63  SGGYAHAPEEVKIVKVISEAGHSHGHDYGHSHGHGSDVKIIKVIQEEGHSHGHGHGYDYS 122

Query: 574 ---HPPAH 588
              H  AH
Sbjct: 123 SGGHGHAH 130


>tr|B6HL50|B6HL50_PENCH Pc21g03410 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc21g03410 PE=4 SV=1
          Length = 473

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 390 PVHHPYKHASCWAIWGSSPVCGQQSGCITWALVQPLPRHVALII 521
           P     KH+  W+ +G  P    ++G I   ++Q LP HV+L++
Sbjct: 175 PFWRDTKHSPVWSCYGGHPPTSDRNGNILQPMLQKLPSHVSLVM 218


>tr|B8NXL5|B8NXL5_ASPFL CDF zinc transporter (Msc2), putative
           OS=Aspergillus flavus NRRL3357 GN=AFLA_008340 PE=4 SV=1
          Length = 324

 Score = 34.3 bits (77), Expect = 7.3
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 466 GASHGHLFNLSHDMXXXXXXATPGQAHAHGHGLSLSHPPAHTQA-SQSHITSAS 624
           G SHGH  + SH         +   +H HGH  S +H  AH+ + S SH  S S
Sbjct: 203 GHSHGHSHSHSHHDHDHGHEHSHSHSHGHGHDHSHNHNHAHSHSHSHSHSHSHS 256


>tr|A4RBH7|A4RBH7_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_02891 PE=4 SV=1
          Length = 466

 Score = 34.3 bits (77), Expect = 7.3
 Identities = 26/78 (33%), Positives = 34/78 (43%)
 Frame = +1

Query: 391 QSTILTSMQAAGQYGEVPQYVASRVGASHGHLFNLSHDMXXXXXXATPGQAHAHGHGLSL 570
           ++T  T+  A G+    P  V  R   + G L    HD       +TPG     GHG   
Sbjct: 320 RATDFTTATALGEPSSAPLVVRPR---TQGPLDYFGHDRPQHSPASTPG-----GHG--- 368

Query: 571 SHPPAHTQASQSHITSAS 624
            HP  H Q S S I++AS
Sbjct: 369 -HPQPHRQPSSSSISAAS 385


>tr|B4L0Z9|B4L0Z9_DROMO GI13077 OS=Drosophila mojavensis GN=GI13077
           PE=4 SV=1
          Length = 205

 Score = 33.9 bits (76), Expect = 9.5
 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = +1

Query: 391 QSTILTSMQAAGQYGEVPQYVASRVGASHG-HLFNLSHDMXXXXXXATPGQAHAHGHGLS 567
           Q T+L + Q     G VP + + +VG  H  HL +  H+M            H   HG +
Sbjct: 9   QPTLLEASQ-----GHVPHHHSHQVGVQHSSHLPHSGHNMPSPPTAHNHHHHHGGHHGNA 63

Query: 568 LSHPPAHTQASQSHITSASTQP 633
            SH     Q  QSH  S    P
Sbjct: 64  SSHHQQSHQQQQSHQQSHHQNP 85


>tr|B3M9K4|B3M9K4_DROAN GF25091 OS=Drosophila ananassae GN=GF25091
           PE=4 SV=1
          Length = 2011

 Score = 33.9 bits (76), Expect = 9.5
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +1

Query: 532 PGQAHAHGHG---LSLSH-PPAHTQASQSHITSASTQPS 636
           P  AHAHGHG    S+ H PPA T  + +H TS  + P+
Sbjct: 855 PLSAHAHGHGHVASSIPHSPPARTNHTHAHSTSMPSTPA 893