DK959425 |
Clone id |
TST39A01NGRL0004_K12 |
Library |
TST39 |
Length |
664 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_K12. 5' end sequence. |
Accession |
DK959425 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL439Contig1 |
Sequence |
CATTATCCGAGCACATGGCGGCCGCCTCTTGTTCTCGCTGCGCGATGCAAGCAGCCTCTT CCTACGTGGCAGCAGTAGCAACATCGCCATCAGTATCTTCGGCATCATCATCCCTTCCTG TAGCCCGCTCAGCAGCGAATGTGATCCCTGGGTCGCAGAAATCTCGCCTTCATGCAACTT TTCTTCAAAGATCTCCTGTGCCTGCTCGTCCTCATGTATTGAAAAGCCCTTGCTGTGCTG TCTCAGTTGGGATCTCCTCCGAGCCAGAGACCGCAGTTGAAGGGGTCAACATAGCTGAGG ATGTTACCCAGCTTATAGGGAAAACTCCCATGGTTTACCTGAATAAGGTGACAGATGGAT GTGGTGGCTATATTGCAGCTAAACTGGAGTCCATGGAACCTTGCTCTAGTGTTAAAGACA GGATTGGGAGAAGTATGATTGAAGATGCCGAATCAAAAGGGCTTATTGTCCCCGGAAAGA GTGTTTTAGTTGAGCCTACTAGTGGAAACACGGGTATTGGTTTAGCTTTTATAGCTGCGT CTAAAGGCTATAAGCTAATCCTTACAATGCCTGCATCAATGAGTCTGGAACGGCGTGTGC TACTGAAGGCGTTTGGTGCTGAGCTGGTACTGACCGACCCTGCCAGAGGAATGAAGGGAG CGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31300 |
Definition |
sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum |
Align length |
144 |
Score (bit) |
219.0 |
E-value |
1.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959425|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_K12, 5' (664 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromopla... 219 1e-56 sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromopla... 218 2e-56 sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromopla... 214 4e-55 sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromopla... 213 7e-55 sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 209 8e-54 sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=C... 209 1e-53 sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabid... 208 2e-53 sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 207 5e-53 sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1... 203 8e-52 sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 203 8e-52 sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2... 203 8e-52 sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2... 200 5e-51 sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 199 8e-51 sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 198 2e-50 sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana ... 197 3e-50 sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic ... 194 3e-49 sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (str... 152 2e-36 sp|P0A534|CYSK_MYCTU Cysteine synthase A OS=Mycobacterium tuberc... 149 1e-35 sp|P0A535|CYSK_MYCBO Cysteine synthase A OS=Mycobacterium bovis ... 149 1e-35 sp|O32978|CYSK_MYCLE Cysteine synthase A OS=Mycobacterium leprae... 148 3e-35 sp|P37887|CYSK_BACSU Serine-dependent cysteine synthase OS=Bacil... 139 1e-32 sp|Q5XAQ3|CYSK_STRP6 Cysteine synthase OS=Streptococcus pyogenes... 139 1e-32 sp|Q7DDL5|CYSK_NEIMB Cysteine synthase OS=Neisseria meningitidis... 139 2e-32 sp|Q59966|SRPG_SYNE7 Cysteine synthase, plasmid OS=Synechococcus... 135 1e-31 sp|P0A1E3|CYSK_SALTY Cysteine synthase A OS=Salmonella typhimuri... 135 3e-31 sp|P0A1E4|CYSK_SALTI Cysteine synthase A OS=Salmonella typhi GN=... 135 3e-31 sp|P0ABK5|CYSK_ECOLI Cysteine synthase A OS=Escherichia coli (st... 135 3e-31 sp|P0ABK6|CYSK_ECO57 Cysteine synthase A OS=Escherichia coli O15... 135 3e-31 sp|Q8CMT6|CYSK_STAES Cysteine synthase OS=Staphylococcus epiderm... 134 6e-31 sp|Q5HRP1|CYSK_STAEQ Cysteine synthase OS=Staphylococcus epiderm... 134 6e-31
>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1 Length = 374
Score = 219 bits (557), Expect = 1e-56 Identities = 116/144 (80%), Positives = 123/144 (85%) Frame = +3
Query: 231 CCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSS 410 C AVSV S E +EG+NIAEDVTQLIG TPMVYLN + GC IAAKLE MEPC S Sbjct: 49 CKAVSVQTKSPTE--IEGLNIAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCS 106
Query: 411 VKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLE 590 VKDRIG SMI DAE KGLI PGK+VLVEPTSGNTGIGLAFIAAS+GYKLILTMPASMSLE Sbjct: 107 VKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLE 166
Query: 591 RRVLLKAFGAELVLTDPARGMKGA 662 RRV+LKAFGAELVLTDPA+GMKGA Sbjct: 167 RRVILKAFGAELVLTDPAKGMKGA 190
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1 Length = 386
Score = 218 bits (556), Expect = 2e-56 Identities = 116/144 (80%), Positives = 123/144 (85%) Frame = +3
Query: 231 CCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSS 410 C AVSV S E +EG+NIAEDVTQLIG TPMVYLN + GC IAAKLE MEPC S Sbjct: 51 CKAVSVPTKSSTE--IEGLNIAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCS 108
Query: 411 VKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLE 590 VKDRIG SMI DAE KGLI PGK+VLVEPTSGNTGIGLAFIAAS+GYKLILTMPASMSLE Sbjct: 109 VKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLE 168
Query: 591 RRVLLKAFGAELVLTDPARGMKGA 662 RRV+LKAFGAELVLTDPA+GMKGA Sbjct: 169 RRVILKAFGAELVLTDPAKGMKGA 192
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2 Length = 383
Score = 214 bits (544), Expect = 4e-55 Identities = 110/149 (73%), Positives = 126/149 (84%) Frame = +3
Query: 216 VLKSPCCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESM 395 V SP +V +S P + +EG+NIAEDV+QLIGKTPMVYLN V+ G IAAKLESM Sbjct: 44 VSSSPITCKAVSLS--PPSTIEGLNIAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESM 101
Query: 396 EPCSSVKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPA 575 EPC SVKDRIG SMI+DAE KG+I PGK+ LVEPTSGNTGIGLAFIAA++GYK+ LTMPA Sbjct: 102 EPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPA 161
Query: 576 SMSLERRVLLKAFGAELVLTDPARGMKGA 662 SMS+ERRV+LKAFGAELVLTDPA+GMKGA Sbjct: 162 SMSMERRVILKAFGAELVLTDPAKGMKGA 190
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2 Length = 392
Score = 213 bits (542), Expect = 7e-55 Identities = 110/141 (78%), Positives = 119/141 (84%) Frame = +3
Query: 240 VSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKD 419 V +S +PE VEG+NIA++ QLIGKTPMVYLN V GC +AAKLE MEPC SVKD Sbjct: 58 VCKAVSIKPEAGVEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKD 117
Query: 420 RIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRV 599 RIG SMI DAE KGLI PGKSVLVE TSGNTGIGLAFIAASKGYKLILTMPASMSLERRV Sbjct: 118 RIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRV 177
Query: 600 LLKAFGAELVLTDPARGMKGA 662 LL+AFGAELVLT+PA+GM GA Sbjct: 178 LLRAFGAELVLTEPAKGMTGA 198
>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2 Length = 321
Score = 209 bits (533), Expect = 8e-54 Identities = 102/127 (80%), Positives = 116/127 (91%) Frame = +3
Query: 282 GVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKG 461 G IA+DVT+LIG TP+VYLN+VTDGC G +AAKLESMEPCSSVKDRIG SMI DAE KG Sbjct: 2 GETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKG 61
Query: 462 LIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDP 641 LI PGKSVL+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFGAEL+LTDP Sbjct: 62 LITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDP 121
Query: 642 ARGMKGA 662 GMKGA Sbjct: 122 LLGMKGA 128
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1 Length = 325
Score = 209 bits (532), Expect = 1e-53 Identities = 102/124 (82%), Positives = 115/124 (92%) Frame = +3
Query: 291 IAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKGLIV 470 IA+DVT+LIG TP+VYLNKVTDGC G +AAKLESMEPCSSVKDRIG SMI DAE KG IV Sbjct: 9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIV 68
Query: 471 PGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDPARG 650 PGKSVL+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFGAEL+LTDP G Sbjct: 69 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 128
Query: 651 MKGA 662 MKGA Sbjct: 129 MKGA 132
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3 Length = 430
Score = 208 bits (529), Expect = 2e-53 Identities = 105/132 (79%), Positives = 116/132 (87%) Frame = +3
Query: 267 ETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIED 446 ET +G+NIA++V+QLIGKTPMVYLN + GC IAAKLE MEPC SVKDRIG SM+ D Sbjct: 105 ETGPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTD 164
Query: 447 AESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAEL 626 AE KG I PGKSVLVEPTSGNTGIGLAFIAAS+GY+LILTMPASMS+ERRVLLKAFGAEL Sbjct: 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAEL 224
Query: 627 VLTDPARGMKGA 662 VLTDPA+GM GA Sbjct: 225 VLTDPAKGMTGA 236
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1 Length = 325
Score = 207 bits (526), Expect = 5e-53 Identities = 105/130 (80%), Positives = 113/130 (86%) Frame = +3
Query: 273 AVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAE 452 A G +IA DVT LIG TP+VYLNKV DGC IAAKLE MEPCSSVKDRIG SMI DAE Sbjct: 2 AESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAE 61
Query: 453 SKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVL 632 KGLI PGKSVL+EPTSGNTGIGLAF+AA+KGYKLILTMPASMS+ERR++LKAFGAELVL Sbjct: 62 EKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVL 121
Query: 633 TDPARGMKGA 662 TDP GMKGA Sbjct: 122 TDPLLGMKGA 131
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1 Length = 325
Score = 203 bits (516), Expect = 8e-52 Identities = 100/124 (80%), Positives = 112/124 (90%) Frame = +3
Query: 291 IAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKGLIV 470 IA+DVT+LIGKTP+VYLN V DGC +AAKLE MEPCSSVKDRIG SMI DAE GLI Sbjct: 8 IAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGLIT 67
Query: 471 PGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDPARG 650 PG+SVL+EPTSGNTGIGLAFIAA+KGYKLI+TMPASMSLERR +L+AFGAEL+LTDPA+G Sbjct: 68 PGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELILTDPAKG 127
Query: 651 MKGA 662 MKGA Sbjct: 128 MKGA 131
>sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 Length = 325
Score = 203 bits (516), Expect = 8e-52 Identities = 102/125 (81%), Positives = 112/125 (89%) Frame = +3
Query: 288 NIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKGLI 467 +IA+DVT+LIG TP+VYLNKVTDGC G AKLESMEPCSSVKDRIG SMI DAE KGLI Sbjct: 7 SIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLI 66
Query: 468 VPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDPAR 647 PG SVL+EPTSGNTGIGLAF+AA+KGYKL LTMPASMS+ERR++LKAFGAELVLTDP Sbjct: 67 TPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLL 126
Query: 648 GMKGA 662 GMKGA Sbjct: 127 GMKGA 131
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q3L197 |
Definition |
tr|Q3L197|Q3L197_ALLSA Cysteine synthase OS=Allium sativum |
Align length |
164 |
Score (bit) |
225.0 |
E-value |
2.0e-57 |
Report |
|