DK959463 |
Clone id |
TST39A01NGRL0004_M04 |
Library |
TST39 |
Length |
690 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_M04. 5' end sequence. |
Accession |
DK959463 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2934Contig1 |
Sequence |
GCACACCATCGAGACACGCGCACACACACAAACACACACAGACTGTGAGTCCGTGACACA GTCATCTTTTCTGCTCTTTCCTCATGGCCATACCTGGTGTGTTGCGAACAGACATGGCTT CTCTAAGTTCCGGCGTTGCTTCCGTGCACCGGCCTTCTTCTTCCTCTGCTTCCACGGCTT CAACATCTTCTCCATGTCTGCGCATCTCGCCAAGCAACAGACACTCCGTGAAAGTGTCGT GCTCAATACAGCGGGGGCGAGCTGTACTGCCAAGTAGGAGGAAAGATGGCATTTTTAATA GCTTCTCGGGCCTTCGACCTGCTCATCTTACGTCAAATAGGCAGCTGAGGCCTTTTAGCA GGTGCGACAGGAGAAGTGGGGCTGGAACAATTCGCTGTGATGCAGGCAAAGTAAGCATCC GTCATCTACGTTCAACTGTGCCATGTTGATTGCGAAGTGAATGGATTAGGCAATTCTGAT AACCTTCTGGATCAGATAACACAGGGTGACTTCACTGATATGGCGTGGCAAGCTGTGGTT GCATCATCAGAGGTTGCCAAGGAGAGTAAGCAACAGATTGTGGAGATTGAGCATTTGATG AAGGCTTTATTAGAACAAAGAAATGGGGTCGCTAGGAAGATATTTGCTAAAGCTGGGGTT GATAATACTTCACTGCTTCAAGCAACTGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7NFE9 |
Definition |
sp|Q7NFE9|CLPB_GLOVI Chaperone protein clpB OS=Gloeobacter violaceus |
Align length |
55 |
Score (bit) |
65.1 |
E-value |
3.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TAU3 |
Definition |
tr|A9TAU3|A9TAU3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
66 |
Score (bit) |
114.0 |
E-value |
6.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959463|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_M04, 5' (690 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TAU3|A9TAU3_PHYPA Predicted protein OS=Physcomitrella paten... 114 6e-24 tr|Q4LDR0|Q4LDR0_SOLLC Heat shock protein OS=Solanum lycopersicu... 107 9e-22 tr|Q75GT3|Q75GT3_ORYSJ Os03g0426900 protein OS=Oryza sativa subs... 102 2e-20 tr|B8AKD9|B8AKD9_ORYSI Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|A3AJA8|A3AJA8_ORYSJ Putative uncharacterized protein OS=Oryza... 102 3e-20 tr|B8AIX1|B8AIX1_ORYSI Putative uncharacterized protein OS=Oryza... 100 1e-19 tr|Q9LF37|Q9LF37_ARATH ClpB heat shock protein-like OS=Arabidops... 99 2e-19 tr|Q0E3C8|Q0E3C8_ORYSJ Os02g0181900 protein OS=Oryza sativa subs... 99 3e-19 tr|A3A3U0|A3A3U0_ORYSJ Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|Q8VYJ7|Q8VYJ7_ARATH At2g25140/F13D4.100 OS=Arabidopsis thalia... 96 2e-18 tr|A7PN28|A7PN28_VITVI Chromosome chr14 scaffold_21, whole genom... 93 1e-17 tr|Q9LLI0|Q9LLI0_PHALU ClpB OS=Phaseolus lunatus GN=clpB PE=2 SV=1 92 3e-17 tr|A7P5X9|A7P5X9_VITVI Chromosome chr4 scaffold_6, whole genome ... 90 2e-16 tr|A8I972|A8I972_CHLRE ClpB chaperone, Hsp100 family OS=Chlamydo... 87 8e-16 tr|A4RY55|A4RY55_OSTLU Chaperone, Hsp100 family, ClpB-type OS=Os... 67 8e-10 tr|Q5N3P2|Q5N3P2_SYNP6 ATP-dependent Clp protease ATP-binding su... 63 2e-08 tr|Q118T1|Q118T1_TRIEI ATPase AAA-2 OS=Trichodesmium erythraeum ... 62 3e-08 tr|B8HLU8|B8HLU8_9CHRO ATP-dependent chaperone ClpB OS=Cyanothec... 62 5e-08 tr|B0JKF2|B0JKF2_MICAN ClpB protein OS=Microcystis aeruginosa (s... 60 1e-07 tr|B4B413|B4B413_9CHRO ATP-dependent chaperone ClpB OS=Cyanothec... 60 1e-07 tr|A8YC16|A8YC16_MICAE Similar to the Nter part of tr|Q4BZZ7|Q4B... 60 1e-07 tr|A0YNR3|A0YNR3_9CYAN ATPase OS=Lyngbya sp. PCC 8106 GN=L8106_1... 60 1e-07 tr|B7KEA0|B7KEA0_9CHRO ATP-dependent chaperone ClpB OS=Cyanothec... 60 2e-07 tr|B5W0X8|B5W0X8_SPIMA ATP-dependent chaperone ClpB OS=Arthrospi... 60 2e-07 tr|Q10YU4|Q10YU4_TRIEI ATPase AAA-2 OS=Trichodesmium erythraeum ... 59 2e-07 tr|Q3AKW7|Q3AKW7_SYNSC ATPase OS=Synechococcus sp. (strain CC960... 59 4e-07 tr|B0JQ24|B0JQ24_MICAN ClpB protein OS=Microcystis aeruginosa (s... 59 4e-07 tr|A8YD23|A8YD23_MICAE ClpB1 protein OS=Microcystis aeruginosa P... 59 4e-07 tr|A0ZAN2|A0ZAN2_NODSP ATPase OS=Nodularia spumigena CCY 9414 GN... 59 4e-07 tr|B1WXM8|B1WXM8_CYAA5 ATP-dependent Clp protease, ATP-binding s... 58 5e-07
>tr|A9TAU3|A9TAU3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193192 PE=3 SV=1 Length = 909
Score = 114 bits (285), Expect = 6e-24 Identities = 56/66 (84%), Positives = 63/66 (95%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 QI QG+FT+MAWQA+VAS +VAKESKQQIVE EHLMKALLEQRNG+AR+IFAKAGVDNTS Sbjct: 8 QINQGEFTEMAWQAIVASPDVAKESKQQIVETEHLMKALLEQRNGLARRIFAKAGVDNTS 67
Query: 673 LLQATD 690 LLQAT+ Sbjct: 68 LLQATE 73
>tr|Q4LDR0|Q4LDR0_SOLLC Heat shock protein OS=Solanum lycopersicum GN=Lehsp100/ClpB PE=2 SV=1 Length = 980
Score = 107 bits (266), Expect = 9e-22 Identities = 51/66 (77%), Positives = 61/66 (92%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 +ITQ DFT+MAWQA+VAS E+AKE+K QIVE EHLMKALLEQ+NG+AR+IF+KAGVDNT Sbjct: 83 RITQQDFTEMAWQAIVASPEIAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTR 142
Query: 673 LLQATD 690 LL+ATD Sbjct: 143 LLEATD 148
>tr|Q75GT3|Q75GT3_ORYSJ Os03g0426900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020H02.1 PE=2 SV=1 Length = 978
Score = 102 bits (254), Expect = 2e-20 Identities = 49/66 (74%), Positives = 60/66 (90%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 +ITQ +FT+MAWQ++V+S EVAKESK QIVE EHLMK+LLEQRNG+AR+IF+KAGVDNT Sbjct: 83 RITQQEFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNTR 142
Query: 673 LLQATD 690 LL AT+ Sbjct: 143 LLDATE 148
>tr|B8AKD9|B8AKD9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12134 PE=4 SV=1 Length = 964
Score = 102 bits (254), Expect = 2e-20 Identities = 49/66 (74%), Positives = 60/66 (90%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 +ITQ +FT+MAWQ++V+S EVAKESK QIVE EHLMK+LLEQRNG+AR+IF+KAGVDNT Sbjct: 69 RITQQEFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNTR 128
Query: 673 LLQATD 690 LL AT+ Sbjct: 129 LLDATE 134
>tr|A3AJA8|A3AJA8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010880 PE=4 SV=1 Length = 715
Score = 102 bits (253), Expect = 3e-20 Identities = 49/65 (75%), Positives = 59/65 (90%) Frame = +1
Query: 496 ITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTSL 675 ITQ +FT+MAWQ++V+S EVAKESK QIVE EHLMK+LLEQRNG+AR+IF+KAGVDNT L Sbjct: 65 ITQQEFTEMAWQSIVSSPEVAKESKHQIVETEHLMKSLLEQRNGLARRIFSKAGVDNTRL 124
Query: 676 LQATD 690 L AT+ Sbjct: 125 LDATE 129
>tr|B8AIX1|B8AIX1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06111 PE=4 SV=1 Length = 1219
Score = 100 bits (248), Expect = 1e-19 Identities = 46/66 (69%), Positives = 60/66 (90%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 QIT G+FT+MAW+AVV + + A+ SKQQ+VE EHLMKALLEQ++G+AR+IF+KAG+DNTS Sbjct: 94 QITPGEFTEMAWEAVVGAVDAARMSKQQVVEAEHLMKALLEQKDGLARRIFSKAGIDNTS 153
Query: 673 LLQATD 690 +LQATD Sbjct: 154 VLQATD 159
Score = 98.6 bits (244), Expect = 3e-19 Identities = 45/66 (68%), Positives = 60/66 (90%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 +IT G+FT+MAW+AVV + + A+ SKQQ+VE EHLMKALLEQ++G+AR+IF+KAG+DNTS Sbjct: 330 KITPGEFTEMAWEAVVGAVDAARMSKQQVVEAEHLMKALLEQKDGLARRIFSKAGIDNTS 389
Query: 673 LLQATD 690 +LQATD Sbjct: 390 VLQATD 395
>tr|Q9LF37|Q9LF37_ARATH ClpB heat shock protein-like OS=Arabidopsis thaliana GN=T20K14_60 PE=3 SV=1 Length = 968
Score = 99.4 bits (246), Expect = 2e-19 Identities = 45/66 (68%), Positives = 61/66 (92%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 ++TQ +FT+MAWQ++V+S +VAKE+KQQIVE EHLMKALLEQ+NG+AR+IF+K GVDNT Sbjct: 76 RLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLARRIFSKIGVDNTK 135
Query: 673 LLQATD 690 +L+AT+ Sbjct: 136 VLEATE 141
>tr|Q0E3C8|Q0E3C8_ORYSJ Os02g0181900 protein OS=Oryza sativa subsp. japonica GN=Os02g0181900 PE=3 SV=1 Length = 922
Score = 98.6 bits (244), Expect = 3e-19 Identities = 45/66 (68%), Positives = 59/66 (89%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 QIT G+FT+MAW+ VV + + A+ SKQQ+VE EHLMKALLEQ++G+AR+IF+KAG+DNTS Sbjct: 36 QITPGEFTEMAWEGVVGAVDAARMSKQQVVEAEHLMKALLEQKDGLARRIFSKAGIDNTS 95
Query: 673 LLQATD 690 +LQATD Sbjct: 96 VLQATD 101
>tr|A3A3U0|A3A3U0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005462 PE=3 SV=1 Length = 952
Score = 97.4 bits (241), Expect = 7e-19 Identities = 44/66 (66%), Positives = 59/66 (89%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 +IT G+FT+MAW+ VV + + A+ SKQQ+VE EHLMKALLEQ++G+AR+IF+KAG+DNTS Sbjct: 28 EITPGEFTEMAWEGVVGAVDAARMSKQQVVEAEHLMKALLEQKDGLARRIFSKAGIDNTS 87
Query: 673 LLQATD 690 +LQATD Sbjct: 88 VLQATD 93
>tr|Q8VYJ7|Q8VYJ7_ARATH At2g25140/F13D4.100 OS=Arabidopsis thaliana GN=At2g25140 PE=2 SV=1 Length = 964
Score = 95.9 bits (237), Expect = 2e-18 Identities = 43/66 (65%), Positives = 58/66 (87%) Frame = +1
Query: 493 QITQGDFTDMAWQAVVASSEVAKESKQQIVEIEHLMKALLEQRNGVARKIFAKAGVDNTS 672 Q+ Q +FT+MAW+ ++ + + A+ESKQQIVE EHLMKALLEQ++G+ARKIF KAG+DN+S Sbjct: 82 QVNQNEFTEMAWEGLINAFDAARESKQQIVESEHLMKALLEQKDGMARKIFTKAGIDNSS 141
Query: 673 LLQATD 690 +LQATD Sbjct: 142 VLQATD 147
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