DK959483 |
Clone id |
TST39A01NGRL0004_M24 |
Library |
TST39 |
Length |
711 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_M24. 5' end sequence. |
Accession |
DK959483 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL583Contig1 |
Sequence |
ATGGTAGACCCGTCGAAGGAGACCGACAACAACACTCCGATTCTAGCATCTGCAGCAGGA ACGCCACAACCCTCGCCATCGCCACCTGTAGAGCTTCTTCCTAGCGACCGGCCTCCCCTT CTTCCCTTAACAGCCGAATTGATTCAAGACAAAGAGACCGAGGAGAAGGACAGACGAGCT CGTGAAAGTGAGGATAGAGACCGCAAAAACAGAGAGATCAAGGCCGGCCTTCATCCTTTA CAGCATCGGTTTGTCCTATGGTACACTAGGCGCTCTCCCGGGGCACGGACACAGACTGCT TATGAAGAAAGCATCAAGAAAATAGCCGATTTCAGCACGGTTGAGGGTTTTTGGGGCTGT TATTGTCACCTTGCACGTGTATCCTCTTTGCCCACTTCGACTGACTTTCATCTTTTCAAG GAGGGAATTCGACCCCTGTGGGAGGATGCCGCAAATCGCAATGGTGGAAAATGGATTATT CGCTTCAAAAAAATTGTCTCGGGACGGTTTTGGGAGGACTTGGTATTAGCCATTGTTGGA GACCAGCTGGAGGCGGGTGATAGTGTGTGTGGTGCTGTGCTAAGTGTTCGTTATAACGAG GATATTTTGAGCGTTTGGAACCGCAGTGCCTCAGATAATCAGGCTGTTATGTCATTAAGA GATTCCTTGAAGAGGCACTTGCACTTACCTCAGAGCTATGTCATGGAGTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FK59 |
Definition |
sp|Q9FK59|IF4E3_ARATH Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana |
Align length |
169 |
Score (bit) |
267.0 |
E-value |
4.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RFE7 |
Definition |
tr|A9RFE7|A9RFE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
189 |
Score (bit) |
302.0 |
E-value |
1.0e-80 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959483|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0004_M24, 5' (711 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RFE7|A9RFE7_PHYPA Predicted protein OS=Physcomitrella paten... 302 1e-80 tr|A7PW42|A7PW42_VITVI Chromosome chr8 scaffold_34, whole genome... 295 2e-78 tr|B4FGA3|B4FGA3_MAIZE Putative uncharacterized protein OS=Zea m... 285 3e-75 tr|Q10NQ9|Q10NQ9_ORYSJ Os03g0262400 protein OS=Oryza sativa subs... 281 2e-74 tr|B6T450|B6T450_MAIZE Eukaryotic translation initiation factor ... 281 2e-74 tr|A2XES5|A2XES5_ORYSI Putative uncharacterized protein OS=Oryza... 281 2e-74 tr|A9P259|A9P259_PICSI Putative uncharacterized protein OS=Picea... 281 3e-74 tr|A3RCV9|A3RCV9_WHEAT Translation initiation factor nCBP OS=Tri... 280 7e-74 tr|Q6DER4|Q6DER4_XENTR MGC89871 protein (Eukaryotic translation ... 195 2e-48 tr|Q4FZQ5|Q4FZQ5_XENLA MGC116437 protein OS=Xenopus laevis GN=MG... 195 2e-48 tr|A1L200|A1L200_DANRE Zgc:158544 protein OS=Danio rerio GN=zgc:... 195 2e-48 tr|Q80ZJ3|Q80ZJ3_MOUSE Eif4e2 protein OS=Mus musculus GN=Eif4e2 ... 195 3e-48 tr|Q3UUT0|Q3UUT0_MOUSE Putative uncharacterized protein OS=Mus m... 195 3e-48 tr|Q0P688|Q0P688_MOUSE Eukaryotic translation initiation factor ... 195 3e-48 tr|B0BNH0|B0BNH0_RAT Eif4e2 protein OS=Rattus norvegicus GN=Eif4... 195 3e-48 tr|Q0II31|Q0II31_BOVIN Eukaryotic translation initiation factor ... 195 3e-48 tr|Q59FE1|Q59FE1_HUMAN Eukaryotic translation initiation factor ... 195 3e-48 tr|Q53RG0|Q53RG0_HUMAN cDNA FLJ12456 fis, clone NT2RM1000661, hi... 195 3e-48 tr|B9A044|B9A044_HUMAN Putative uncharacterized protein EIF4E2 O... 195 3e-48 tr|B8ZZJ9|B8ZZJ9_HUMAN Eukaryotic translation initiation factor ... 195 3e-48 tr|B8ZZ50|B8ZZ50_HUMAN Putative uncharacterized protein EIF4E2 O... 195 3e-48 tr|B5XEN3|B5XEN3_SALSA Eukaryotic translation initiation factor ... 194 4e-48 tr|Q9D334|Q9D334_MOUSE Putative uncharacterized protein OS=Mus m... 194 6e-48 tr|A6XJR1|A6XJR1_PIG Eukaryotic translation initiation factor 4E... 194 6e-48 tr|A3KLJ3|A3KLJ3_STRPU Eukaryotic translation initiation factor ... 193 1e-47 tr|Q5R4J0|Q5R4J0_PONAB Putative uncharacterized protein DKFZp459... 192 1e-47 tr|B6M764|B6M764_BRAFL Putative uncharacterized protein OS=Branc... 191 4e-47 tr|Q6PBU4|Q6PBU4_DANRE Zgc:73242 OS=Danio rerio GN=zgc:73242 PE=... 191 5e-47 tr|B7PMU0|B7PMU0_IXOSC Initiation factor 4E, putative OS=Ixodes ... 189 1e-46 tr|Q28F16|Q28F16_XENTR Novel protein similar to eukaryotic trans... 187 4e-46
>tr|A9RFE7|A9RFE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113199 PE=3 SV=1 Length = 286
Score = 302 bits (774), Expect = 1e-80 Identities = 139/189 (73%), Positives = 160/189 (84%) Frame = +1
Query: 145 QDKETXXXXXXXXXXXXXXXKNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKI 324 +DKE + REI+AGLHPLQHRFV WYTRR PG R+QT+YE++IKKI Sbjct: 78 KDKENDEKNRRVREGDDRDRQTREIRAGLHPLQHRFVFWYTRRQPGIRSQTSYEDNIKKI 137
Query: 325 ADFSTVEGFWGCYCHLARVSSLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSG 504 ADFSTVEGFWG YCHLAR S+LP TD HLFKEGIRPLWEDAANR+GGKWIIRFKK+VSG Sbjct: 138 ADFSTVEGFWGIYCHLARASTLPNPTDLHLFKEGIRPLWEDAANRSGGKWIIRFKKLVSG 197
Query: 505 RFWEDLVLAIVGDQLEAGDSVCGAVLSVRYNEDILSVWNRSASDNQAVMSLRDSLKRHLH 684 R+WEDLVLA++GDQL+ GDSVCGAVLS+R+ EDILS+WNR+ASDNQAVM+LRDS+KRHLH Sbjct: 198 RYWEDLVLAMIGDQLDFGDSVCGAVLSIRFGEDILSIWNRNASDNQAVMALRDSIKRHLH 257
Query: 685 LPQSYVMEY 711 LP Y+MEY Sbjct: 258 LPIGYMMEY 266
>tr|A7PW42|A7PW42_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025466001 PE=3 SV=1 Length = 225
Score = 295 bits (755), Expect = 2e-78 Identities = 132/167 (79%), Positives = 155/167 (92%) Frame = +1
Query: 211 REIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVSSL 390 R++KAGLHPL+H+FV WYTRR+PG RTQT+YE++IKKI DFSTVEGFW CYCHLAR S+L Sbjct: 39 RDLKAGLHPLKHKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWICYCHLARPSAL 98
Query: 391 PTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDSVC 570 P+ TD HLFKEGIRPLWED+AN NGGKWIIRFKK+VSGRFWEDLVLA+VGDQL+ GD++C Sbjct: 99 PSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNIC 158
Query: 571 GAVLSVRYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 GAVLS+R+NEDILSVWNR+ASD+QAVM+LRD++KRHL LP YVMEY Sbjct: 159 GAVLSIRFNEDILSVWNRNASDHQAVMALRDAIKRHLKLPHGYVMEY 205
>tr|B4FGA3|B4FGA3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 229
Score = 285 bits (728), Expect = 3e-75 Identities = 131/169 (77%), Positives = 152/169 (89%) Frame = +1
Query: 205 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 384 +NR++K+GLHPL+H+ VLWYTRR+PGAR+Q+ YE++IKKI DFSTVE FW CYCHLAR S Sbjct: 42 RNRDLKSGLHPLRHKLVLWYTRRTPGARSQS-YEDNIKKIIDFSTVESFWVCYCHLARPS 100
Query: 385 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDS 564 SLP+ TD HLFK+GIRPLWED AN+NGGKWIIRFKK VSGRFWEDLVL +VGDQLE D Sbjct: 101 SLPSPTDLHLFKDGIRPLWEDPANQNGGKWIIRFKKAVSGRFWEDLVLVVVGDQLEYSDD 160
Query: 565 VCGAVLSVRYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 VCG VLSVR+NEDILSVWNR+ASD+QAVM+LRDS+KRHL LP SY+MEY Sbjct: 161 VCGVVLSVRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYLMEY 209
>tr|Q10NQ9|Q10NQ9_ORYSJ Os03g0262400 protein OS=Oryza sativa subsp. japonica GN=Os03g0262400 PE=2 SV=1 Length = 227
Score = 281 bits (720), Expect = 2e-74 Identities = 131/169 (77%), Positives = 149/169 (88%) Frame = +1
Query: 205 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 384 +NRE+KAG HPL+ RFVLWYTRR+PGAR+Q+ YE++IKKI DFSTVE FW CYCHL R Sbjct: 40 RNRELKAGFHPLRRRFVLWYTRRTPGARSQS-YEDNIKKIVDFSTVESFWVCYCHLTRPV 98
Query: 385 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDS 564 SLP+ TD HLFKEGIRPLWED ANR+GGKWIIRFKK VSGRFWEDLVL +VGDQL+ D Sbjct: 99 SLPSPTDLHLFKEGIRPLWEDPANRSGGKWIIRFKKTVSGRFWEDLVLVLVGDQLDYSDD 158
Query: 565 VCGAVLSVRYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 VCG VLSVR+NEDILSVWNR+ASD+QAVM+LRDS+KRHL LP SY+MEY Sbjct: 159 VCGVVLSVRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHSYLMEY 207
>tr|B6T450|B6T450_MAIZE Eukaryotic translation initiation factor 4E type 3 OS=Zea mays PE=2 SV=1 Length = 229
Score = 281 bits (720), Expect = 2e-74 Identities = 130/169 (76%), Positives = 151/169 (89%) Frame = +1
Query: 205 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 384 +NR++K+GLHPL+H+ VLWYTRR+ GAR+Q+ YE++IKKI DFSTVE FW CYCHLAR S Sbjct: 42 RNRDLKSGLHPLRHKLVLWYTRRTXGARSQS-YEDNIKKIIDFSTVESFWVCYCHLARPS 100
Query: 385 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDS 564 SLP+ TD HLFK+GIRPLWED AN+NGGKWIIRFKK VSGRFWEDLVL +VGDQLE D Sbjct: 101 SLPSPTDLHLFKDGIRPLWEDPANQNGGKWIIRFKKAVSGRFWEDLVLVVVGDQLEYSDD 160
Query: 565 VCGAVLSVRYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 VCG VLSVR+NEDILSVWNR+ASD+QAVM+LRDS+KRHL LP SY+MEY Sbjct: 161 VCGVVLSVRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYLMEY 209
>tr|A2XES5|A2XES5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10838 PE=3 SV=1 Length = 227
Score = 281 bits (720), Expect = 2e-74 Identities = 131/169 (77%), Positives = 149/169 (88%) Frame = +1
Query: 205 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 384 +NRE+KAG HPL+ RFVLWYTRR+PGAR+Q+ YE++IKKI DFSTVE FW CYCHL R Sbjct: 40 RNRELKAGFHPLRRRFVLWYTRRTPGARSQS-YEDNIKKIVDFSTVESFWVCYCHLTRPV 98
Query: 385 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDS 564 SLP+ TD HLFKEGIRPLWED ANR+GGKWIIRFKK VSGRFWEDLVL +VGDQL+ D Sbjct: 99 SLPSPTDLHLFKEGIRPLWEDPANRSGGKWIIRFKKTVSGRFWEDLVLVLVGDQLDYSDD 158
Query: 565 VCGAVLSVRYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 VCG VLSVR+NEDILSVWNR+ASD+QAVM+LRDS+KRHL LP SY+MEY Sbjct: 159 VCGVVLSVRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHSYLMEY 207
>tr|A9P259|A9P259_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 245
Score = 281 bits (719), Expect = 3e-74 Identities = 133/194 (68%), Positives = 153/194 (78%) Frame = +1
Query: 130 TAELIQDKETXXXXXXXXXXXXXXXKNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEE 309 TAE+I +KE +RE++AGLHPLQHRFV WY RR PG R+Q +YEE Sbjct: 33 TAEMI-NKEKEDRARREKEAEERERHSRELRAGLHPLQHRFVFWYLRRQPGVRSQASYEE 91
Query: 310 SIKKIADFSTVEGFWGCYCHLARVSSLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFK 489 ++KKI +FSTVEGFW CYCH ARVSS+P T+ HLFKEGIRPLWED NR+GGKWIIR Sbjct: 92 NMKKIVEFSTVEGFWVCYCHFARVSSMPNPTNLHLFKEGIRPLWEDPGNRSGGKWIIRLN 151
Query: 490 KIVSGRFWEDLVLAIVGDQLEAGDSVCGAVLSVRYNEDILSVWNRSASDNQAVMSLRDSL 669 K VSGRFWEDLVLA+VGDQL+ GD VCG VLSVR+ EDILSVWNR+ASD QAVM LRDS+ Sbjct: 152 KAVSGRFWEDLVLAMVGDQLDYGDDVCGIVLSVRFGEDILSVWNRNASDGQAVMVLRDSI 211
Query: 670 KRHLHLPQSYVMEY 711 K+HLHLP SY+MEY Sbjct: 212 KKHLHLPASYLMEY 225
>tr|A3RCV9|A3RCV9_WHEAT Translation initiation factor nCBP OS=Triticum aestivum PE=2 SV=1 Length = 232
Score = 280 bits (716), Expect = 7e-74 Identities = 129/169 (76%), Positives = 149/169 (88%) Frame = +1
Query: 205 KNREIKAGLHPLQHRFVLWYTRRSPGARTQTAYEESIKKIADFSTVEGFWGCYCHLARVS 384 +NRE+KAGLHPL+ + VLWYTRR+PG R+Q+ YE++IKKI DFSTVE FW CYCHLAR S Sbjct: 45 RNRELKAGLHPLRRKLVLWYTRRTPGTRSQS-YEDNIKKIVDFSTVESFWVCYCHLARPS 103
Query: 385 SLPTSTDFHLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDS 564 SLP+ TD HLFKEG+RPLWED ANRNGGKWIIRFKK VSGRFWEDLVL +VGDQL+ D Sbjct: 104 SLPSPTDLHLFKEGVRPLWEDPANRNGGKWIIRFKKAVSGRFWEDLVLVLVGDQLDYSDD 163
Query: 565 VCGAVLSVRYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 VCG VLS R+NEDILSVWNR+ASD+QAVM+LRDS+KRHL LP +Y+MEY Sbjct: 164 VCGIVLSCRFNEDILSVWNRNASDHQAVMTLRDSIKRHLKLPHTYLMEY 212
>tr|Q6DER4|Q6DER4_XENTR MGC89871 protein (Eukaryotic translation initiation factor 4E member 2) OS=Xenopus tropicalis GN=MGC89871 PE=2 SV=1 Length = 234
Score = 195 bits (496), Expect = 2e-48 Identities = 85/161 (52%), Positives = 122/161 (75%), Gaps = 1/161 (0%) Frame = +1
Query: 232 HPLQHRFVLWYTRRSPGARTQT-AYEESIKKIADFSTVEGFWGCYCHLARVSSLPTSTDF 408 HPLQ+ + WY+RR+PG T + +YE++IK+I F++VE FW Y H+ R L +DF Sbjct: 54 HPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDF 113
Query: 409 HLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDSVCGAVLSV 588 HLFKEGI+P+WED AN+NGGKWIIR +K ++ R WE+L+LA++G+Q G+ +CGAV+SV Sbjct: 114 HLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSV 173
Query: 589 RYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 R+ EDI+S+WN++ASD +RD+L+R L+LP + VMEY Sbjct: 174 RFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTVMEY 214
>tr|Q4FZQ5|Q4FZQ5_XENLA MGC116437 protein OS=Xenopus laevis GN=MGC116437 PE=2 SV=1 Length = 235
Score = 195 bits (496), Expect = 2e-48 Identities = 85/161 (52%), Positives = 122/161 (75%), Gaps = 1/161 (0%) Frame = +1
Query: 232 HPLQHRFVLWYTRRSPGARTQT-AYEESIKKIADFSTVEGFWGCYCHLARVSSLPTSTDF 408 HPLQ+ + WY+RR+PG T + +YE++IK+I F++VE FW Y H+ R L +DF Sbjct: 55 HPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDF 114
Query: 409 HLFKEGIRPLWEDAANRNGGKWIIRFKKIVSGRFWEDLVLAIVGDQLEAGDSVCGAVLSV 588 HLFKEGI+P+WED AN+NGGKWIIR +K ++ R WE+L+LA++G+Q G+ +CGAV+SV Sbjct: 115 HLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSV 174
Query: 589 RYNEDILSVWNRSASDNQAVMSLRDSLKRHLHLPQSYVMEY 711 R+ EDI+S+WN++ASD +RD+L+R L+LP + VMEY Sbjct: 175 RFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTVMEY 215
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