NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959528
Clone id TST39A01NGRL0004_P01
Library
Length 636
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0004_P01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTAGCGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTGACACAAACACA
CACAGGCACACATACCCTAGGAAAGGAGTAAAGAACGACGTTGGGAGAAGCGGATCGAGC
ATGACGAGCAGCGGCGACACAAGAATATAGAAAGAAAGGAGCAGCAACAACGTCGACGAG
GACATTATTTCGCAGAGCTTCCGGCCATAAAGATGAGATATACACGCACCACGAGCAGCA
GGAACTCGATGTTGCAGGAGTCATCTTTCGCCCGAGATCAGAAAACTCATGTCTCCAGCC
TCAAAGCCAGGAACCTTTTGCAGATTCTACGGAGATGGAGAGCGCAAAGCCTGAAGCAAA
CCACCCTCAGTGGCGCGTCCATGGCGTCGCGCAGATCTGCTGCCCGCTCGCACTCCTGCT
TAAGTTTGGGGCTCACCTTAGCGCCGTTGAGGTGCTTAAGCATGCAATTGCATTCTGATG
ATAAAAATGAAGGACAAAATGGAGCCGAACTTTTAACAGCGCCAAGCCGTGGAAGCCCGA
GGCAAATTTGCGGCTCTGGGGGCCAGGGTAGTACTCTTTCAACACCTCGCGCATTGTCTT
GCCCGAAGGTAGGCACTAGTCCATTGAGCGCATGTA
■■Homology search results ■■ -
sp_hit_id Q6JBY9
Definition sp|Q6JBY9|CPZIP_HUMAN Capz-interacting protein OS=Homo sapiens
Align length 85
Score (bit) 33.1
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959528|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_P01, 5'
         (636 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6JBY9|CPZIP_HUMAN Capz-interacting protein OS=Homo sapiens G...    33   1.2  
sp|Q04791|SASB_ANAPL Fatty acyl-CoA hydrolase precursor, medium ...    33   1.2  
sp|Q6X1Y6|ACCN3_MOUSE Amiloride-sensitive cation channel 3 OS=Mu...    32   2.7  
sp|P51022|PNT1_DROME ETS-like protein pointed, isoform P1 OS=Dro...    31   4.7  
sp|O35240|ACCN3_RAT Amiloride-sensitive cation channel 3 OS=Ratt...    31   6.1  
sp|Q8R0W5|ESTHL_MOUSE Carboxylesterase UNQ440/PRO873 homolog OS=...    31   6.2  

>sp|Q6JBY9|CPZIP_HUMAN Capz-interacting protein OS=Homo sapiens
           GN=RCSD1 PE=1 SV=1
          Length = 416

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = +2

Query: 98  TLGEADRA*--RAAATQEYRKKGAATTSTRTLFRRASGHKDEIYTHHEQQELDVAGVIFR 271
           TLG A++    R+ +  E +++  AT   +   +     ++    H  Q+E+  +     
Sbjct: 230 TLGPAEKPPLRRSPSRTEKQEEDRATEEAKNGEKARRSSEEVDGQHPAQEEVPESPQTSG 289

Query: 272 PRSENSCLQPQSQEPFADSTEMESA 346
           P +EN C  P+ ++P  +  EME A
Sbjct: 290 PEAENRCGSPREEKPAGEEAEMEKA 314


>sp|Q04791|SASB_ANAPL Fatty acyl-CoA hydrolase precursor, medium
           chain OS=Anas platyrhynchos PE=1 SV=1
          Length = 557

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 180 LVDVVAAPFFLYSCVAAARHARSASPNVVLYSF 82
           L+D +A P F++S V  ARH R A   V  Y F
Sbjct: 409 LLDSIADPLFVFSAVEVARHHRDAGNPVYFYEF 441


>sp|Q6X1Y6|ACCN3_MOUSE Amiloride-sensitive cation channel 3 OS=Mus
           musculus GN=Accn3 PE=1 SV=2
          Length = 530

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
 Frame = -3

Query: 628 LNGLVPTFGQDNARGVERVLPWPPEPQICLGLPRLGAVKSSAPF--------CPS-FLSS 476
           L+ L P +G  N   V+    + PEP   LG P      SS P+        C S +++ 
Sbjct: 273 LSFLPPPWGDCNTASVDP--DFDPEPSDPLGSP-----SSSPPYSLIGCRLACESRYVAR 325

Query: 475 ECNCMLKHL--NGAKVSPKLKQECERAADLRDAMDAPLRVVCFRLCA 341
           +C C + H+  N    SP+  ++C  A+   DAM      VC   CA
Sbjct: 326 KCGCRMMHMPGNSPVCSPQQYKDC--ASPALDAMLRKDTCVCPNPCA 370


>sp|P51022|PNT1_DROME ETS-like protein pointed, isoform P1
           OS=Drosophila melanogaster GN=pnt PE=2 SV=1
          Length = 623

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
 Frame = +3

Query: 120 HDEQRRHKNIERKEQQQRRRGHYFAELPAIKMR-----YTRTTSSRNSMLQESSFARDQK 284
           H +Q++ ++  + +QQQ+      A+LP  ++       T TTSS +S    SS A  Q 
Sbjct: 117 HPQQQQQQHSHQSQQQQQHGYGSSAQLPHHRLSGGSTGSTTTTSSGSSSSGSSSSASSQG 176

Query: 285 THVSSLKARNLLQILRRWRAQSL 353
               S  A NL+  L    A SL
Sbjct: 177 FANGSATANNLVGALSSSTAASL 199


>sp|O35240|ACCN3_RAT Amiloride-sensitive cation channel 3 OS=Rattus
           norvegicus GN=Accn3 PE=1 SV=1
          Length = 533

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
 Frame = -3

Query: 628 LNGLVPTFGQDNARGVERVLPWPPEPQICLGLPRLGAVKSSAPF--------CPS-FLSS 476
           L+ L P +G  N   ++    + PEP   LG PR    + S P+        C S +++ 
Sbjct: 273 LSFLPPPWGDCNTASLDPD-DFDPEPSDPLGSPR---PRPSPPYSLIGCRLACESRYVAR 328

Query: 475 ECNCMLKHL--NGAKVSPKLKQECERAADLRDAMDAPLRVVCFRLCA 341
           +C C + H+  N    SP+  ++C  A+   DAM      VC   CA
Sbjct: 329 KCGCRMMHMPGNSPVCSPQQYKDC--ASPALDAMLRKDTCVCPNPCA 373


>sp|Q8R0W5|ESTHL_MOUSE Carboxylesterase UNQ440/PRO873 homolog OS=Mus
           musculus PE=2 SV=1
          Length = 556

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 186 NVLVDVVAAPFFLYSCVAAARHARSASPNVVLYSF 82
           N L+D++    F+Y+ + AAR+ R A   V LY F
Sbjct: 416 NRLIDLIGDATFVYATLQAARYHRDAGSPVYLYEF 450
tr_hit_id B2TDK9
Definition tr|B2TDK9|B2TDK9_BURPP Putative uncharacterized protein OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
Align length 40
Score (bit) 35.4
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959528|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0004_P01, 5'
         (636 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2TDK9|B2TDK9_BURPP Putative uncharacterized protein OS=Burkh...    35   2.9  
tr|A8JAM7|A8JAM7_CHLRE Predicted protein OS=Chlamydomonas reinha...    35   2.9  
tr|A0AD25|A0AD25_STRAM Putative tetR-family transcriptional regu...    35   5.0  
tr|O30328|O30328_ACEEU Aldehyde dehydrogenase subunit III OS=Ace...    34   6.5  
tr|Q16H88|Q16H88_AEDAE Monocarboxylate transporter OS=Aedes aegy...    34   8.4  

>tr|B2TDK9|B2TDK9_BURPP Putative uncharacterized protein
           OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
           GN=Bphyt_4681 PE=3 SV=1
          Length = 127

 Score = 35.4 bits (80), Expect = 2.9
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +3

Query: 486 NEGQNGAELLTAPSRGSPRQICGSGGQGSTLSTPRALSCP 605
           N G N   L++ P +G+P Q   +G  G+TL+  R LSCP
Sbjct: 89  NAGVNSVRLVSTPPQGTPAQ---NGQPGTTLAPQRVLSCP 125


>tr|A8JAM7|A8JAM7_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_193456 PE=4 SV=1
          Length = 856

 Score = 35.4 bits (80), Expect = 2.9
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = -3

Query: 574 VLPWPPEPQICLGLPRLGAVKSSAPFCPSFLSSECNCMLKHLNGA 440
           +L W PEP  CL  PR GA  S   + P+F S    C L    GA
Sbjct: 213 LLSWSPEPSACLVEPRPGAFDSPGSYVPAF-SGVYGCFLNAAPGA 256


>tr|A0AD25|A0AD25_STRAM Putative tetR-family transcriptional
           regulator OS=Streptomyces ambofaciens ATCC 23877
           GN=SAMR0670 PE=4 SV=1
          Length = 227

 Score = 34.7 bits (78), Expect = 5.0
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +2

Query: 311 EPFADSTEMESAKPEANHPQWRVHGVAQICCPLALLLKFGAHLSAVEVLKHAIA 472
           E   D+   E A+ E  H  WR+HG      P   +   GAH++    L  AIA
Sbjct: 95  EALRDALAAELAEAEQQHELWRLHGKVLRAAPHLFVRSLGAHMADETELAEAIA 148


>tr|O30328|O30328_ACEEU Aldehyde dehydrogenase subunit III
           OS=Acetobacter europaeus GN=aldG PE=4 SV=1
          Length = 157

 Score = 34.3 bits (77), Expect = 6.5
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +2

Query: 275 RSENSCLQPQSQEPFADSTEMESAKPEANHP---QWRVHGVAQICCPLALLLKFGAHLSA 445
           R+  SC+ P S    AD T +E   PE NHP    WR     +I  P     + G  + A
Sbjct: 53  RATRSCVTPVSAAEGADITTIEGIDPEGNHPVQQAWR-----EIQVPQCGYCQSGQIMQA 107

Query: 446 VEVLK 460
           V +LK
Sbjct: 108 VSLLK 112


>tr|Q16H88|Q16H88_AEDAE Monocarboxylate transporter OS=Aedes aegypti
           GN=AAEL014109 PE=4 SV=1
          Length = 651

 Score = 33.9 bits (76), Expect = 8.4
 Identities = 21/84 (25%), Positives = 41/84 (48%)
 Frame = +2

Query: 134 ATQEYRKKGAATTSTRTLFRRASGHKDEIYTHHEQQELDVAGVIFRPRSENSCLQPQSQE 313
           +T  Y+ +G+   S R   +R     +E+Y    QQ+     ++  P++E     PQ+Q 
Sbjct: 516 STFVYKNRGSGYDSQRNS-KRLKQRNEEMYNRIHQQKHQQQDILLPPKTEQQQPPPQTQG 574

Query: 314 PFADSTEMESAKPEANHPQWRVHG 385
              D++ +ES + +A   +W + G
Sbjct: 575 LTQDASHVESTE-KAPKSEWIIGG 597