DK959553 |
Clone id |
TST39A01NGRL0005_A05 |
Library |
TST39 |
Length |
671 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_A05. 5' end sequence. |
Accession |
DK959553 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL51Contig1 |
Sequence |
GTTTCTTTCATTTCCGGGGCTTAATATCTTCGGCCCTCATCTGTTGCCTCTCCCCTCTCA CCCACATAGCACCTACTGCCTTCGCAAGTAGGTTTAGGGTTTCTGCAGTAGAGCAGCTAT GGTGTCCGCCTGCTTCTCTTCAGTTAATGGTTCGCTTGCAGCAGCAGCTGCCTCCACCAC TAGGCCAGAGGGGCGTTTAACCCTGTTGCAGGCTCCCCGCTCCTTGCGGACCTTGCGACC GTTCGAGCTTCGCATGCTCTCGCTGTCTGTCCCTCGCAAAGGTCTACACAGACATGGATA TGGTGTGGTTGGGCAAGCTCATGCAGAGCTTTCTGTGGAAGAAGTTCAAGCCCTCGATGC CTCCTCAGACGAAGATGAGCGCGAAGAAGGTGACTCTCTTGATAACGGACCTTCTTTTCG GGACAACGGCCCGCCCTTTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGAACCTGCCATG GAGCTGCAACAGCGAAGAACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCGTAGACATGGT TGAGGTTATTTATGACAAAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTGTCACTATGAG CTCTGTAGAGGACTGTAATACTGCCATTGAGAAGCTAGACGGGGCTGATTATGCTGGAAG GACATTGCGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZUU4 |
Definition |
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana |
Align length |
88 |
Score (bit) |
89.7 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959553|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_A05, 5' (671 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 90 1e-17 sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 89 2e-17 sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 89 2e-17 sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 89 2e-17 sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 87 1e-16 sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S... 86 2e-16 sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 84 5e-16 sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 83 1e-15 sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 82 2e-15 sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 82 3e-15 sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 79 2e-14 sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 78 4e-14 sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae... 70 1e-11 sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae... 69 2e-11 sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit... 68 4e-11 sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit... 68 4e-11 sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech... 67 9e-11 sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa... 67 9e-11 sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=... 67 1e-10 sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=... 67 1e-10 sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=... 67 1e-10 sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae... 66 1e-10 sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae... 66 1e-10 sp|Q5RDA3|CSTF2_PONAB Cleavage stimulation factor 64 kDa subunit... 66 1e-10 sp|P33240|CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit... 66 1e-10 sp|Q8HXM1|CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit... 66 1e-10 sp|Q8BIQ5|CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit... 66 2e-10 sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 65 4e-10 sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 65 4e-10 sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 65 4e-10
>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1 Length = 289
Score = 89.7 bits (221), Expect = 1e-17 Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 3/88 (3%) Frame = +2
Query: 416 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 586 F D PP +S + KL+VGNLP++ +S +LA +F+ G+V+MVEVIYDK +GRSRGFG Sbjct: 76 FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135
Query: 587 FVTMSSVEDCNTAIEKLDGADYAGRTLR 670 FVTMSSV + A ++ +G + GR LR Sbjct: 136 FVTMSSVSEVEAAAQQFNGYELDGRPLR 163
Score = 76.3 bits (186), Expect = 1e-13 Identities = 38/89 (42%), Positives = 52/89 (58%) Frame = +2
Query: 404 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 583 +G + G S ++YVGNL W + L +F + G V VIYD++SGRS+GF Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247
Query: 584 GFVTMSSVEDCNTAIEKLDGADYAGRTLR 670 GFVT S ++ AI+ LDGAD GR +R Sbjct: 248 GFVTYDSSQEVQNAIKSLDGADLDGRQIR 276
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 Length = 291
Score = 89.4 bits (220), Expect = 2e-17 Identities = 44/80 (55%), Positives = 61/80 (76%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P F E + KL+VGNLP+S +S LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E Sbjct: 81 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + A ++ +G + GR +R Sbjct: 140 EVEAAEQQFNGYEIDGRAIR 159
Score = 77.4 bits (189), Expect = 6e-14 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 8/92 (8%) Frame = +2
Query: 419 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 574 RD FG +S ++YVGNL W + L +F + G+V +V+YD++SGRS Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247
Query: 575 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLR 670 RGFGFVT SS ++ N AI+ L+G D GR++R Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIR 279
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 233
Score = 89.4 bits (220), Expect = 2e-17 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 2/84 (2%) Frame = +2
Query: 422 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 595 + G F E AKL+VGNLP+ +SE+LAG+F G V++ EVIY++E+ RSRGFGFVT Sbjct: 43 EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102
Query: 596 MSSVEDCNTAIEKLDGADYAGRTL 667 MS+VE+ A+E L+G D GR L Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQL 126
Score = 76.3 bits (186), Expect = 1e-13 Identities = 37/76 (48%), Positives = 48/76 (63%) Frame = +2
Query: 443 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 622 E ++YVGNLPW ++ L +F + G V V+ D+E+GRSRGFGFVTMSS + N Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205
Query: 623 AIEKLDGADYAGRTLR 670 AI LDG GR +R Sbjct: 206 AIAALDGQTLDGRAVR 221
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 Length = 292
Score = 89.0 bits (219), Expect = 2e-17 Identities = 44/80 (55%), Positives = 61/80 (76%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P F E + KL+VGNLP+S +S LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E Sbjct: 82 PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + A ++ +G + GR +R Sbjct: 141 EVEAAEQQFNGYEIDGRAIR 160
Score = 77.8 bits (190), Expect = 5e-14 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 8/92 (8%) Frame = +2
Query: 419 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 574 RD FG +S ++YVGNL W + L +F + G+V +V+YD++SGRS Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248
Query: 575 RGFGFVTMSSVEDCNTAIEKLDGADYAGRTLR 670 RGFGFVT SS ++ N AI+ L+G D GR++R Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIR 280
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 Length = 273
Score = 86.7 bits (213), Expect = 1e-16 Identities = 41/72 (56%), Positives = 56/72 (77%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 K++VGNLP+S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++ Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 635 LDGADYAGRTLR 670 +G + GR LR Sbjct: 148 FNGYELDGRALR 159
Score = 83.6 bits (205), Expect = 9e-16 Identities = 39/76 (51%), Positives = 52/76 (68%) Frame = +2
Query: 443 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 622 +S ++YVGNL W + + L +F + G V +V+YD++SGRSRGFGFVT SS E+ N Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244
Query: 623 AIEKLDGADYAGRTLR 670 AIE LDG D GR +R Sbjct: 245 AIESLDGVDLNGRAIR 260
>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1 Length = 260
Score = 85.5 bits (210), Expect = 2e-16 Identities = 38/77 (49%), Positives = 56/77 (72%) Frame = +2
Query: 440 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 619 GE +LYVGN+P + N++EL + ++ G++++ EV+YDK SGRSR FGFVTM +VED N Sbjct: 80 GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139
Query: 620 TAIEKLDGADYAGRTLR 670 IEKL+ + GR ++ Sbjct: 140 AVIEKLNDTEIGGRKIK 156
Score = 48.9 bits (115), Expect = 2e-05 Identities = 28/78 (35%), Positives = 43/78 (55%) Frame = +2
Query: 437 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 616 F ES K+Y+GNL + +E L F + G V +V + +S GFGFV+ SS E+ Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238
Query: 617 NTAIEKLDGADYAGRTLR 670 AI+ L+ + G+ +R Sbjct: 239 EAAIQALNNSVLEGQKIR 256
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 Length = 279
Score = 84.3 bits (207), Expect = 5e-16 Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 8/94 (8%) Frame = +2
Query: 413 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 568 SFR+N G +S ++YVGNL W + + L +F + G V +V+YD++SG Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232
Query: 569 RSRGFGFVTMSSVEDCNTAIEKLDGADYAGRTLR 670 RSRGFGFVT SS E+ N AIE LDG D GR +R Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIR 266
Score = 82.8 bits (203), Expect = 1e-15 Identities = 40/72 (55%), Positives = 55/72 (76%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 K++VGNL +S +S LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+ A ++ Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 635 LDGADYAGRTLR 670 +G + GR LR Sbjct: 148 FNGYELDGRALR 159
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1 Length = 329
Score = 83.2 bits (204), Expect = 1e-15 Identities = 39/72 (54%), Positives = 56/72 (77%) Frame = +2
Query: 452 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 631 AKL+VGNL + NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++ TA+E Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209
Query: 632 KLDGADYAGRTL 667 K + D GR L Sbjct: 210 KFNRYDLNGRLL 221
Score = 83.2 bits (204), Expect = 1e-15 Identities = 39/83 (46%), Positives = 53/83 (63%) Frame = +2
Query: 422 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 601 + P E ++YVGNLPW ++ L +F + G V V+YD+E+GRSRGFGFVTMS Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293
Query: 602 SVEDCNTAIEKLDGADYAGRTLR 670 V++ N AI LDG + GR +R Sbjct: 294 DVDELNEAISALDGQNLEGRAIR 316
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2 Length = 342
Score = 82.4 bits (202), Expect = 2e-15 Identities = 38/72 (52%), Positives = 55/72 (76%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KL+VGNL ++ +S +LA +F+ G+V+MVEVIYDK +GRSRGFGFVTMS+ + A ++ Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 635 LDGADYAGRTLR 670 +G ++ GR LR Sbjct: 160 FNGYEFEGRPLR 171
Score = 76.3 bits (186), Expect = 1e-13 Identities = 36/72 (50%), Positives = 48/72 (66%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 +LYVGNL W + L +F + G V VIYD++SGRS+GFGFVT+SS ++ AI Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 635 LDGADYAGRTLR 670 L+GAD GR +R Sbjct: 318 LNGADLDGRQIR 329
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 Length = 276
Score = 81.6 bits (200), Expect = 3e-15 Identities = 40/72 (55%), Positives = 54/72 (75%) Frame = +2
Query: 452 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 631 AKL+VGNLP+ +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E Sbjct: 97 AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156
Query: 632 KLDGADYAGRTL 667 D GR L Sbjct: 157 LYSQYDLNGRLL 168
Score = 79.3 bits (194), Expect = 2e-14 Identities = 38/83 (45%), Positives = 51/83 (61%) Frame = +2
Query: 422 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 601 + P + ++YVGN+PW + L VF + G V V++D+ESGRSRGFGFVTMS Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240
Query: 602 SVEDCNTAIEKLDGADYAGRTLR 670 S + + AI LDG GRT+R Sbjct: 241 SEAEMSEAIANLDGQTLDGRTIR 263
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BDH4 |
Definition |
tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
72 |
Score (bit) |
109.0 |
E-value |
1.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959553|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_A05, 5' (671 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis... 109 1e-22 tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ... 108 3e-22 tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit... 102 2e-20 tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo... 100 6e-20 tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m... 100 1e-19 tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul... 99 2e-19 tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic... 98 5e-19 tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs... 97 1e-18 tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza... 97 1e-18 tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 96 2e-18 tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ... 95 5e-18 tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra... 95 5e-18 tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs... 94 6e-18 tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 94 6e-18 tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza... 94 6e-18 tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ... 94 1e-17 tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs... 94 1e-17 tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea... 94 1e-17 tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza... 94 1e-17 tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten... 93 1e-17 tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten... 93 1e-17 tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 92 2e-17 tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome... 92 2e-17 tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea... 92 4e-17 tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea... 92 4e-17 tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops... 90 1e-16 tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops... 90 1e-16 tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=... 90 1e-16 tr|B6SS58|B6SS58_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1 87 7e-16 tr|B4FMY7|B4FMY7_MAIZE Putative uncharacterized protein OS=Zea m... 87 7e-16
>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026573 PE=4 SV=1 Length = 355
Score = 109 bits (273), Expect = 1e-22 Identities = 49/72 (68%), Positives = 60/72 (83%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KLY GNLP+SC+S LAG+ Q GS ++VEV+YD+++GRSRGF FVTMSSVEDCN IE Sbjct: 67 KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126
Query: 635 LDGADYAGRTLR 670 LDG++Y GRTLR Sbjct: 127 LDGSEYGGRTLR 138
Score = 47.0 bits (110), Expect = 0.001 Identities = 23/46 (50%), Positives = 30/46 (65%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 568 P + E+ KL+VGNL WS SE L VFQ+ G+V V+YD E+G Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195
>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001 PE=4 SV=1 Length = 283
Score = 108 bits (270), Expect = 3e-22 Identities = 48/72 (66%), Positives = 61/72 (84%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KLY GNLP+SC+S +LAG+ Q GS ++VEV+Y++++GRSRGF FVTMSSVEDCN IE Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 635 LDGADYAGRTLR 670 LDG++Y GRTLR Sbjct: 172 LDGSEYGGRTLR 183
Score = 80.1 bits (196), Expect = 1e-13 Identities = 39/80 (48%), Positives = 54/80 (67%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P + E+ KL+VGNL WS SE L VFQ+ G+V V+YD E+GRSRG+GFV S+ Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + +TA+E L+G + GR +R Sbjct: 255 EMDTALESLNGVELEGRAIR 274
>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_47163 PE=4 SV=1 Length = 192
Score = 102 bits (255), Expect = 2e-20 Identities = 46/72 (63%), Positives = 58/72 (80%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED IE+ Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 635 LDGADYAGRTLR 670 LDG D GR L+ Sbjct: 61 LDGHDVGGRPLK 72
Score = 78.6 bits (192), Expect = 3e-13 Identities = 37/72 (51%), Positives = 49/72 (68%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 K++VGNL W ++ L +F G V V+YD+ESGRSRGFGFVT S V + + AI+ Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167
Query: 635 LDGADYAGRTLR 670 LDGA++ GR LR Sbjct: 168 LDGAEFDGRELR 179
>tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseolus vulgaris GN=RNP1 PE=2 SV=1 Length = 287
Score = 100 bits (250), Expect = 6e-20 Identities = 44/72 (61%), Positives = 58/72 (80%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KLY GNLP+S +S +LAG+ Q GS +++EV+YD+++G+SRGF FVTMS +EDCN IE Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173
Query: 635 LDGADYAGRTLR 670 LDG +Y GRTLR Sbjct: 174 LDGKEYLGRTLR 185
Score = 71.6 bits (174), Expect = 4e-11 Identities = 35/80 (43%), Positives = 50/80 (62%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P + E+ KL+VGNL WS +E L FQ+ G+V V+YD E+GRSRG+GFV S+ E Sbjct: 197 PLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKE 256
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + A+ L+ + GR +R Sbjct: 257 EMEAALGALNDVELEGRAMR 276
>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 287
Score = 100 bits (248), Expect = 1e-19 Identities = 47/90 (52%), Positives = 65/90 (72%), Gaps = 2/90 (2%) Frame = +2
Query: 407 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 580 G S D+GP S KLY GNLP++C+S +LAG+ Q+ S +MVEV+YD+ +GRSRG Sbjct: 99 GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158
Query: 581 FGFVTMSSVEDCNTAIEKLDGADYAGRTLR 670 F FVTM++V+DC I+ LDG+ Y GRT++ Sbjct: 159 FAFVTMTTVQDCELVIKNLDGSLYGGRTMK 188
Score = 70.9 bits (172), Expect = 7e-11 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 4/90 (4%) Frame = +2
Query: 413 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 580 +F D P + E+ KL+VGNL W+ SE L F + G+V V+YD E+GRSRG Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249
Query: 581 FGFVTMSSVEDCNTAIEKLDGADYAGRTLR 670 +GFV S+ E+ + A+ L+G + GR +R Sbjct: 250 YGFVCYSTREEMDEALSSLNGMEMEGREMR 279
>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 279
Score = 99.4 bits (246), Expect = 2e-19 Identities = 45/72 (62%), Positives = 58/72 (80%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167
Query: 635 LDGADYAGRTLR 670 LDG+ Y GR LR Sbjct: 168 LDGSQYMGRILR 179
Score = 79.3 bits (194), Expect = 2e-13 Identities = 37/80 (46%), Positives = 53/80 (66%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P + E+ KL++GNL WS SE L FQ+ G+V V+YD E+G+SRG+GFV S+ E Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + TA++ L+G + GR LR Sbjct: 251 ELETALQSLNGVELEGRALR 270
>tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 285
Score = 97.8 bits (242), Expect = 5e-19 Identities = 46/83 (55%), Positives = 63/83 (75%), Gaps = 6/83 (7%) Frame = +2
Query: 440 GESVA------KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 601 GE+VA KLY GNLP+S +S LAG+ ++ GS +++EV+YD+++G+SRGF FVTMS Sbjct: 103 GETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMS 162
Query: 602 SVEDCNTAIEKLDGADYAGRTLR 670 VEDCN I+ LDG ++ GRTLR Sbjct: 163 CVEDCNAVIQNLDGKEFMGRTLR 185
Score = 72.8 bits (177), Expect = 2e-11 Identities = 34/80 (42%), Positives = 53/80 (66%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P + E+ KL+VGNL W+ SE L FQ+ G+V V++D E+G+SRG+GFV+ ++ Sbjct: 197 PLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKS 256
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + +TA+ +D + GRTLR Sbjct: 257 EMDTALAIMDNVELEGRTLR 276
>tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subsp. japonica GN=P0643F09.1 PE=2 SV=1 Length = 316
Score = 96.7 bits (239), Expect = 1e-18 Identities = 42/72 (58%), Positives = 58/72 (80%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KLY GNLP++C+S +LAG+ Q + +MVEV+YD+ +GRSRGF FVTMS++EDC I+ Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205
Query: 635 LDGADYAGRTLR 670 LDG+ Y+GRT+R Sbjct: 206 LDGSLYSGRTMR 217
Score = 77.0 bits (188), Expect = 1e-12 Identities = 37/80 (46%), Positives = 53/80 (66%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P + E+ KL+VGNL W+ SE L +FQK G+V V+YD E+GRSRG+GFV S+ E Sbjct: 229 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 288
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + + A+ L+G + GR +R Sbjct: 289 EMDEALSSLNGTELEGREIR 308
>tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09422 PE=4 SV=1 Length = 318
Score = 96.7 bits (239), Expect = 1e-18 Identities = 42/72 (58%), Positives = 58/72 (80%) Frame = +2
Query: 455 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 634 KLY GNLP++C+S +LAG+ Q + +MVEV+YD+ +GRSRGF FVTMS++EDC I+ Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207
Query: 635 LDGADYAGRTLR 670 LDG+ Y+GRT+R Sbjct: 208 LDGSLYSGRTMR 219
Score = 77.0 bits (188), Expect = 1e-12 Identities = 37/80 (46%), Positives = 53/80 (66%) Frame = +2
Query: 431 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 610 P + E+ KL+VGNL W+ SE L +FQK G+V V+YD E+GRSRG+GFV S+ E Sbjct: 231 PLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKE 290
Query: 611 DCNTAIEKLDGADYAGRTLR 670 + + A+ L+G + GR +R Sbjct: 291 EMDEALSSLNGTELEGREIR 310
>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1 Length = 268
Score = 96.3 bits (238), Expect = 2e-18 Identities = 46/83 (55%), Positives = 63/83 (75%) Frame = +2
Query: 422 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 601 D F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS Sbjct: 70 DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128
Query: 602 SVEDCNTAIEKLDGADYAGRTLR 670 S E+ A+E+ +G + GR LR Sbjct: 129 SAEEAEAAVEQFNGYAFQGRQLR 151
Score = 82.4 bits (202), Expect = 2e-14 Identities = 40/81 (49%), Positives = 52/81 (64%) Frame = +2
Query: 428 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 607 G F +S K+YVGNL W ++ L +F + G V +VIYD++SGRSRGFGFVT S Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235
Query: 608 EDCNTAIEKLDGADYAGRTLR 670 ++ N AI LDG D GR +R Sbjct: 236 QEVNNAISNLDGIDLDGRQIR 256
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