BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959560|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_A13, 5'
         (692 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6VAB6|KSR2_HUMAN Kinase suppressor of Ras 2 OS=Homo sapiens ...    32   4.2  
sp|Q3MHY8|RBM7_BOVIN RNA-binding protein 7 OS=Bos taurus GN=RBM7...    31   7.2  

>sp|Q6VAB6|KSR2_HUMAN Kinase suppressor of Ras 2 OS=Homo sapiens
           GN=KSR2 PE=1 SV=2
          Length = 950

 Score = 31.6 bits (70), Expect = 4.2
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
 Frame = -2

Query: 661 NHYQSRPPQKSFFQITMSLTFANKLKNQSIPADAQPPSG------YPSLHMNHRGLFPP* 500
           N+   +PP+ S   I+ +L   NK+    IP   QP S         S   +     PP 
Sbjct: 480 NNPLRKPPRYSDLHISQTLPKTNKINKDHIPVPYQPDSSSNPSSTTSSTPSSPAPPLPPS 539

Query: 499 QNPWSPCHSDSMCICQSE 446
             P SP H    C  Q +
Sbjct: 540 ATPPSPLHPSPQCTRQQK 557


>sp|Q3MHY8|RBM7_BOVIN RNA-binding protein 7 OS=Bos taurus GN=RBM7
           PE=2 SV=1
          Length = 262

 Score = 30.8 bits (68), Expect = 7.2
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 493 DFVMAERGHDGSCEGLDNRRGAGHQQGWTGS 585
           DF   +R HDG     DNRR +G    W  S
Sbjct: 230 DFFYEDRNHDGWSHDYDNRRDSGRNGKWRSS 260

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959560|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_A13, 5'
         (692 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XVN2|Q9XVN2_CAEEL Putative uncharacterized protein cutl-7 O...    37   0.91 
tr|Q08DY7|Q08DY7_BOVIN Usher syndrome 1C binding protein 1 OS=Bo...    35   3.5  
tr|B4IZC5|B4IZC5_DROGR GH15072 OS=Drosophila grimshawi GN=GH1507...    35   5.9  
tr|A4ICU5|A4ICU5_LEIIN Amino acid permease-like protein OS=Leish...    35   5.9  

>tr|Q9XVN2|Q9XVN2_CAEEL Putative uncharacterized protein cutl-7
           OS=Caenorhabditis elegans GN=cutl-7 PE=4 SV=2
          Length = 585

 Score = 37.4 bits (85), Expect = 0.91
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
 Frame = +1

Query: 406 LFPEGNMDDGRLSSQIDRCTLSHCDRDSMDFVMAER---GHDGSCEGLDNRRGAGHQQGW 576
           L P+   + G +S+  +     + D+  + F    +    HDG CEG+   + +GH  G 
Sbjct: 275 LLPQIEYEHGAISAYTNAHVFKYADKVQLYFTCTVQLCYKHDGGCEGITPPQCSGHSHGI 334

Query: 577 TGSSIYLRRSRTLLS-ERKTFVGADSGSDWSNSPTSPG 687
            GS          L  E     G D GS + ++P  PG
Sbjct: 335 RGSKGPAEHKFVNLEPETDHHNGNDLGSSFESTPRVPG 372


>tr|Q08DY7|Q08DY7_BOVIN Usher syndrome 1C binding protein 1 OS=Bos
           taurus GN=USHBP1 PE=2 SV=1
          Length = 698

 Score = 35.4 bits (80), Expect = 3.5
 Identities = 40/130 (30%), Positives = 51/130 (39%), Gaps = 30/130 (23%)
 Frame = +2

Query: 125 YRSLPSSFAQLGAVEAP-QQRPPNCSGPVRACLLQEFAEKGCILALQQEAIKLGTCCRG* 301
           +++L  + + L A  A  + RPPNC GPV A    E A K C   L+QE    G+C R  
Sbjct: 114 FQTLQQALSSLEAAAAAWRHRPPNCPGPVEAKDGSEGAPKPC---LEQEG--AGSCQREA 168

Query: 302 RCQASRN-------------LLHLNMF-QALHLEGEVLH---------------IHPPST 394
              A RN             L+    F QA   E E+L                  PPS 
Sbjct: 169 ARLAERNAWLRLALGSREDELIRTQKFLQAFQAEKEMLQREVQELQDSLLRLEPFSPPSC 228

Query: 395 SQEGSSPKGT 424
            Q G S  G+
Sbjct: 229 DQAGGSGSGS 238


>tr|B4IZC5|B4IZC5_DROGR GH15072 OS=Drosophila grimshawi GN=GH15072
           PE=4 SV=1
          Length = 687

 Score = 34.7 bits (78), Expect = 5.9
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
 Frame = -1

Query: 395 LSKVDECVKL---LLLNEALGTCSNVIGSSRLDIFN 297
           L +VD   KL   LL NEA+ +CS+++   RLDIFN
Sbjct: 443 LQRVDAIAKLAGCLLPNEAINSCSDILVEMRLDIFN 478


>tr|A4ICU5|A4ICU5_LEIIN Amino acid permease-like protein
           OS=Leishmania infantum GN=LinJ36.2240 PE=4 SV=1
          Length = 494

 Score = 34.7 bits (78), Expect = 5.9
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -2

Query: 679 MLVNCSNHYQSRPPQKSFFQITMSLTFA 596
           +LVN SNH  SRP Q ++F I +SLT A
Sbjct: 349 VLVNFSNHLDSRPAQLAYFGIVVSLTMA 376