DK959578 |
Clone id |
TST39A01NGRL0005_B08 |
Library |
TST39 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_B08. 5' end sequence. |
Accession |
DK959578 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL473Contig1 |
Sequence |
ATATTACTGCCATCCACAAGTCTCTCCAGCTCGTCGTCGTTGTTCTACATACTCTCGTTC TGCGATCTCTCGTGGGAGGCTCTCCATCCCCCTTTCAATGTTCTAGCTTTCCTCTCAGGT TTCACAGTCTCATCTGTTATCTTAAACTTGACTGTGAGACCTCAAAATCGCCGTTTCCAG CATTGCAAGAACGGAACCATGACGAGTGAGGCTTTTTCCCACTCTCCTTTTCTTTCTATG CCCTTGAATCTGCAGACCAGCAAGAGGAACCCTCAGATGCAAAGGGTTTCCCTTTCCCCT CGACCAAAAGGTATGGCCGTCTGTGCAGCTGTGGGTGCCAGGTCGAGAGCGCACACTCTA TATGATCTTTTGGAGCTTTCGCCCGATGTCGGCATCTCAGATATCAAGCAGGCGTACCGA CAGGTGGACCGGAAGTATCACCCAGATGTCTGCCCCTCTCATCAAGCAGAATAATCTACC AGACGGTTTATTGAAATCCAACAAGCATATGAGACGCTCTCTGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SDN0 |
Definition |
sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana |
Align length |
105 |
Score (bit) |
68.9 |
E-value |
1.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NSB8 |
Definition |
tr|A9NSB8|A9NSB8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
67 |
Score (bit) |
90.1 |
E-value |
6.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959578|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_B08, 5' (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NSB8|A9NSB8_PICSI Putative uncharacterized protein OS=Picea... 90 6e-17 tr|A9NRM3|A9NRM3_PICSI Putative uncharacterized protein OS=Picea... 90 6e-17 tr|A9PFN5|A9PFN5_POPTR Putative uncharacterized protein OS=Popul... 72 2e-11 tr|Q93V89|Q93V89_ORYSJ Putative DnaJ-like protein (Os01g0101700 ... 72 2e-11 tr|A2ZN90|A2ZN90_ORYSJ Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|A2WJM2|A2WJM2_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|A9NM38|A9NM38_PICSI Putative uncharacterized protein OS=Picea... 71 4e-11 tr|Q0GA60|Q0GA60_9SOLN DnaJ-like protein isoform OS=Solanum phur... 70 5e-11 tr|Q3EA41|Q3EA41_ARATH Uncharacterized protein At4g13830.1 OS=Ar... 69 1e-10 tr|A9PGG0|A9PGG0_POPTR Putative uncharacterized protein OS=Popul... 68 2e-10 tr|A5A6Y4|A5A6Y4_SOYBN DnaJ-like protein OS=Glycine max GN=GmJ1 ... 67 4e-10 tr|A9T0F0|A9T0F0_PHYPA Predicted protein OS=Physcomitrella paten... 65 3e-09 tr|A9P0K8|A9P0K8_PICSI Putative uncharacterized protein OS=Picea... 62 1e-08 tr|B6U349|B6U349_MAIZE Chaperone protein dnaJ 20 OS=Zea mays PE=... 62 2e-08 tr|A9T3J5|A9T3J5_PHYPA Predicted protein OS=Physcomitrella paten... 62 2e-08 tr|A7R691|A7R691_VITVI Chromosome undetermined scaffold_1189, wh... 62 2e-08 tr|A5AR44|A5AR44_VITVI Putative uncharacterized protein (Chromos... 62 2e-08 tr|Q66YD1|Q66YD1_CHLRE Chloroplast DnaJ-like protein 2 (Chloropl... 62 2e-08 tr|A9T3T8|A9T3T8_PHYPA Predicted protein (Fragment) OS=Physcomit... 61 4e-08 tr|A9SLR1|A9SLR1_PHYPA Predicted protein (Fragment) OS=Physcomit... 60 9e-08 tr|A9NLL3|A9NLL3_PICSI Putative uncharacterized protein OS=Picea... 60 9e-08 tr|A6Q3K6|A6Q3K6_NITSB Co-chaperone-curved DNA binding protein A... 59 1e-07 tr|B8HLD2|B8HLD2_9CHRO Chaperone protein DnaJ OS=Cyanothece sp. ... 59 1e-07 tr|A9TCL1|A9TCL1_PHYPA Predicted protein OS=Physcomitrella paten... 59 1e-07 tr|A9NZB6|A9NZB6_PICSI Putative uncharacterized protein OS=Picea... 59 1e-07 tr|B3QZK7|B3QZK7_APPPP Chaperone protein OS=Apple proliferation ... 59 2e-07 tr|A2Z0H6|A2Z0H6_ORYSI Putative uncharacterized protein OS=Oryza... 58 3e-07 tr|B8HLD8|B8HLD8_9CHRO Heat shock protein DnaJ domain protein OS... 57 4e-07 tr|Q6H5M3|Q6H5M3_ORYSJ Putative uncharacterized protein OJ1759_F... 57 4e-07 tr|A3BY50|A3BY50_ORYSJ Putative uncharacterized protein OS=Oryza... 57 4e-07
>tr|A9NSB8|A9NSB8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 177
Score = 90.1 bits (222), Expect = 6e-17 Identities = 43/67 (64%), Positives = 52/67 (77%) Frame = +1
Query: 325 AAVGARSRAHTLYDLLELSPDVGISDIKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQ 504 A + + R + Y+LL +S DVG+ DIKQAYRQ+ RKYHPDVCP QAE TRRFIE+Q+ Sbjct: 35 ALLNSVERPPSFYELLGISEDVGLRDIKQAYRQMARKYHPDVCPPEQAEEYTRRFIEVQE 94
Query: 505 AYETLSD 525 AYETLSD Sbjct: 95 AYETLSD 101
>tr|A9NRM3|A9NRM3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 211
Score = 90.1 bits (222), Expect = 6e-17 Identities = 43/67 (64%), Positives = 52/67 (77%) Frame = +1
Query: 325 AAVGARSRAHTLYDLLELSPDVGISDIKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQ 504 A + + R + Y+LL +S DVG+ DIKQAYRQ+ RKYHPDVCP QAE TRRFIE+Q+ Sbjct: 69 ALLNSVERPPSFYELLGISEDVGLRDIKQAYRQMARKYHPDVCPPEQAEEYTRRFIEVQE 128
Query: 505 AYETLSD 525 AYETLSD Sbjct: 129 AYETLSD 135
>tr|A9PFN5|A9PFN5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 196
Score = 72.0 bits (175), Expect = 2e-11 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 5/91 (5%) Frame = +1
Query: 268 NPQMQRVSLSPRPKGM-----AVCAAVGARSRAHTLYDLLELSPDVGISDIKQAYRQVDR 432 NP ++ ++S P G + A VGA + Y+LL ++ + +IKQAY+Q+ R Sbjct: 26 NPILRVKTVSRIPIGSFKTKATINAKVGAELGQMSFYELLGITESGTLPEIKQAYKQLAR 85
Query: 433 KYHPDVCPSHQAE*STRRFIEIQQAYETLSD 525 KYHPDV P + E TRRFI +Q+AYETLSD Sbjct: 86 KYHPDVSPPDRVEEYTRRFIRVQEAYETLSD 116
>tr|Q93V89|Q93V89_ORYSJ Putative DnaJ-like protein (Os01g0101700 protein) (P0402A09.13 protein) (P0455C04.7 protein) OS=Oryza sativa subsp. japonica GN=P0672D08.24 PE=4 SV=1 Length = 190
Score = 71.6 bits (174), Expect = 2e-11 Identities = 33/57 (57%), Positives = 44/57 (77%) Frame = +1
Query: 355 TLYDLLELSPDVGISDIKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQAYETLSD 525 TLYDLL +S + + +++ AYR++ RKYHPDV P A +TRRFIE+Q+AYETLSD Sbjct: 54 TLYDLLGISSEGTLDEVRAAYRRMARKYHPDVSPPDAAAENTRRFIEVQEAYETLSD 110
>tr|A2ZN90|A2ZN90_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000012 PE=4 SV=1 Length = 276
Score = 71.6 bits (174), Expect = 2e-11 Identities = 33/57 (57%), Positives = 44/57 (77%) Frame = +1
Query: 355 TLYDLLELSPDVGISDIKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQAYETLSD 525 TLYDLL +S + + +++ AYR++ RKYHPDV P A +TRRFIE+Q+AYETLSD Sbjct: 140 TLYDLLGISSEGTLDEVRAAYRRMARKYHPDVSPPDAAAENTRRFIEVQEAYETLSD 196
>tr|A2WJM2|A2WJM2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00017 PE=4 SV=1 Length = 190
Score = 71.6 bits (174), Expect = 2e-11 Identities = 33/57 (57%), Positives = 44/57 (77%) Frame = +1
Query: 355 TLYDLLELSPDVGISDIKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQAYETLSD 525 TLYDLL +S + + +++ AYR++ RKYHPDV P A +TRRFIE+Q+AYETLSD Sbjct: 54 TLYDLLGISSEGTLDEVRAAYRRMARKYHPDVSPPDAAAENTRRFIEVQEAYETLSD 110
>tr|A9NM38|A9NM38_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 217
Score = 70.9 bits (172), Expect = 4e-11 Identities = 32/58 (55%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = +1
Query: 355 TLYDLLELSPDVGISDIKQAYRQVDRKYHPDVCPS-HQAE*STRRFIEIQQAYETLSD 525 +LYDLL + + +++IKQAY+Q+ R+YHPDVCP+ Q+E TRRF+++Q+AYE LSD Sbjct: 75 SLYDLLGIPKNGSLAEIKQAYKQLARRYHPDVCPNPDQSEEYTRRFVQVQEAYEVLSD 132
>tr|Q0GA60|Q0GA60_9SOLN DnaJ-like protein isoform OS=Solanum phureja PE=2 SV=1 Length = 177
Score = 70.5 bits (171), Expect = 5e-11 Identities = 32/61 (52%), Positives = 45/61 (73%) Frame = +1
Query: 343 SRAHTLYDLLELSPDVGISDIKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQAYETLS 522 S + + Y+LL + V + +IKQAY+Q+ RKYHPDV P + E +T+RFI +Q+AYETLS Sbjct: 41 SESKSFYELLGIQETVSLLEIKQAYKQLARKYHPDVSPPGRVEENTQRFIRVQEAYETLS 100
Query: 523 D 525 D Sbjct: 101 D 101
>tr|Q3EA41|Q3EA41_ARATH Uncharacterized protein At4g13830.1 OS=Arabidopsis thaliana GN=At4g13830 PE=4 SV=1 Length = 155
Score = 68.9 bits (167), Expect = 1e-10 Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Frame = +1
Query: 214 FSHSPFLSM-PLNLQTSKRNPQMQRVSLSPRPKGMAVCAAVGARSRAHTLYDLLELSPDV 390 + P S+ P ++ T+ P R S S R + +S + YDLL ++ V Sbjct: 19 YKQQPISSLQPTSIPTTISYPTRTRFS-STRIQSRLTHDDPVKQSEDLSFYDLLGVTESV 77
Query: 391 GISDIKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQAYETLSD 525 + +IKQAY+Q+ RKYHPDV P + E T RFI +Q+AYETLSD Sbjct: 78 TLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSD 122
>tr|A9PGG0|A9PGG0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 197
Score = 68.2 bits (165), Expect = 2e-10 Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 2/101 (1%) Frame = +1
Query: 229 FLSMPLNLQTSK--RNPQMQRVSLSPRPKGMAVCAAVGARSRAHTLYDLLELSPDVGISD 402 F PL ++S R + R+ + + A + TLY LL + + Sbjct: 16 FYPSPLKPESSPILRFKPVTRIPIGSFKTKTTINAKITTELGQMTLYQLLGIPESGTFPE 75
Query: 403 IKQAYRQVDRKYHPDVCPSHQAE*STRRFIEIQQAYETLSD 525 IKQAY+Q+ RKYHPDV P + E TRRFI +Q+AYETLSD Sbjct: 76 IKQAYKQLARKYHPDVSPPGRVEEYTRRFIRVQEAYETLSD 116
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