| DK959588 |
| Clone id |
TST39A01NGRL0005_B20 |
| Library |
TST39 |
| Length |
707 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_B20. 5' end sequence. |
| Accession |
DK959588 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL291Contig1 |
| Sequence |
GCTGCTCGATTCATCCAGTCTGCACAGGGATACATGGGTGGAGGAGCAATGATTCGTGGC ATGGCACGATTGATGGGGGTCGCAGCAGCAGGGACTGCTGCAATGGCTCCATCATCTTCT CCAGCTTTCTGCCATGCTTCGACGCAAGAACATTCAGCCAACATGCCATCTGCGCTACAT CTGTCTCAGAAGGAGGCTTCTTCTGGAGGTGTCCCTTCTGACATGCGATTCCTCAATGCA GATGACTTGGAATATTCTTCAGATGAGGATTGGGGCAAACTCTCTTACAATCGCCTTGTA TTTTCCACTGCTCCCTCGGAAGAGGAAGTTGAAGAGGCCACCAAAGAGCTACATGCTGCT CTTCATCTCTCCATTCCTGCCTCTAGTTCTGTGGAAAAAGAGAGCCCAACCATGCCTGTG GTGGAGAATGAGGAGAAAGAATTTGTTCCGGCCATTGTGAATCAAGAGAGGGCAACAGAG GAACAGCTTCCATCTTTGTCTGCTGGCCTGGGTCTGCTTGCTGCAGGAAGCAGCTCTGTT TATCAAGCATTTCATTTATTGCAGACTAACTCCAAGGTCCAGGATGCAGTCAAATCGCTT GCTCGTGATCCGGCAATCTGGAAAGCAGTTTTAAGCAACGAANAGGTTTTGGAGCTCACC CAAACTTTACAGGAGGGACATGAAACTGCTGCTTCTGTTATCTTCAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q5TGJ6 |
| Definition |
sp|Q5TGJ6|HDGL1_HUMAN Hepatoma-derived growth factor-like protein 1 OS=Homo sapiens |
| Align length |
59 |
| Score (bit) |
35.0 |
| E-value |
0.4 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9SL01 |
| Definition |
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
211 |
| Score (bit) |
67.0 |
| E-value |
1.0e-09 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959588|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_B20, 5' (707 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 67 1e-09 tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 67 1e-09 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 63 2e-08 tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 61 8e-08 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 60 1e-07 tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 53 2e-05 tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza... 53 2e-05 tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 50 1e-04 tr|A7Q5B8|A7Q5B8_VITVI Chromosome undetermined scaffold_52, whol... 50 1e-04 tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome... 50 1e-04 tr|A9NUF8|A9NUF8_PICSI Putative uncharacterized protein OS=Picea... 50 2e-04 tr|Q9FKH0|Q9FKH0_ARATH Genomic DNA, chromosome 5, TAC clone:K11J... 49 2e-04 tr|Q01JC7|Q01JC7_ORYSA OSIGBa0122F23.3 protein OS=Oryza sativa G... 49 2e-04 tr|A2XW72|A2XW72_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|Q7XU30|Q7XU30_ORYSJ Os04g0550700 protein OS=Oryza sativa subs... 49 3e-04 tr|A3AW63|A3AW63_ORYSJ Putative uncharacterized protein OS=Oryza... 49 3e-04 tr|A5BI54|A5BI54_VITVI Putative uncharacterized protein OS=Vitis... 48 7e-04 tr|A7PKF7|A7PKF7_VITVI Chromosome chr15 scaffold_19, whole genom... 46 0.002 tr|Q949B5|Q949B5_ORYSA Putative uncharacterized protein W1110ERI... 45 0.005 tr|Q6H689|Q6H689_ORYSJ Os02g0657700 protein OS=Oryza sativa subs... 45 0.005 tr|B8AG50|B8AG50_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.005 tr|B6TL94|B6TL94_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.005 tr|B4G1S6|B4G1S6_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.005 tr|B4FQT4|B4FQT4_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.005 tr|A3A9S8|A3A9S8_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.005 tr|B4FKH1|B4FKH1_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.010 tr|A6N1C1|A6N1C1_ORYSI Putative uncharacterized protein (Fragmen... 44 0.010 tr|A3BQ82|A3BQ82_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.010 tr|A9PAV8|A9PAV8_POPTR Putative uncharacterized protein OS=Popul... 43 0.023
>tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229919 PE=4 SV=1 Length = 375
Score = 67.0 bits (162), Expect = 1e-09 Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%) Frame = +1
Query: 130 CHASTQEHSANMPSALHLS---QKEASSGGVPSDMRF---LNADDLEYSSDEDWGKLSYN 291 C T S P++ ++ E S G +D F L+ +D E++ DED+ Sbjct: 23 CRMCTTTPSLKAPTSARITCDCPSEVHSPGSTTDSGFKQYLDIEDWEFAGDEDY------ 76
Query: 292 RLVFSTAPSEEEVEEATKELHAALHLSI---------------PASSSVEKESPTM--PV 420 LVF T P++ EVEEAT +L AL + + SS EK+ P Sbjct: 77 -LVFGTLPTQGEVEEATSDLQHALQIGLFTNRSSNPLESSLARAGSSGKEKDGAVSRDPK 135
Query: 421 VENEEKEF--VPAIVNQERATEEQLPXXXXXXXXXXXXXXX-VYQAFHLLQTNSKVQDAV 591 V+ E+ + V A+ + L + +AFH Q N ++Q V Sbjct: 136 VDGEDAGYHVVDAVADDWLEPSVALASSSKGKEVAGSGGKSAMLEAFHQFQHNPQIQQMV 195
Query: 592 KSLARDPAIWKAVLSNEXVLELTQTLQEGHE 684 SLA D +W AVL+N+ + E + L+E E Sbjct: 196 VSLATDKGVWDAVLANDQIKEFRKKLREAPE 226
>tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 66.6 bits (161), Expect = 1e-09 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 9/154 (5%) Frame = +1
Query: 241 DDLEYSSDEDWGKLSYN-----RLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKE 402 DD E++ DE+ + Y+ RL+F + P+++EV+E + AL I P S + + Sbjct: 75 DDWEFTGDEEGFQRHYDDDHHDRLIFGSVPTQKEVQEVVSDFQDALTQGIVPVSGNFNDK 134
Query: 403 ---SPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNS 573 S + V + + +VN ++ E V +AF+LLQ+N Sbjct: 135 TTLSSSSSVYKKSGNKSCGTLVNLDQMERES--HEDNYRIVQKAGHNNVCEAFNLLQSNP 192
Query: 574 KVQDAVKSLARDPAIWKAVLSNEXVLELTQTLQE 675 VQ+ V SLA D +W+A+L NE V E Q+LQ+ Sbjct: 193 AVQEMVISLASDKTVWEALLKNEKVTEFRQSLQK 226
>tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17 (AT5g54540/MRB17_4) OS=Arabidopsis thaliana GN=At5g54540 PE=2 SV=1 Length = 297
Score = 63.2 bits (152), Expect = 2e-08 Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 3/180 (1%) Frame = +1
Query: 136 ASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP 315 AS++ SA++ SA+H S +E G + M+ DD E++ +E R+VFS P Sbjct: 44 ASSKPVSASITSAVHPSVEE--DGMI---MQRPVWDDWEFAEEEP-----IPRVVFSKPP 93
Query: 316 SEEEVEEATKELHAALHL---SIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQ 486 S EE +EAT++L A++L S P SS+ + S V F + + RA E Sbjct: 94 SLEEAKEATEDLKEAINLVYMSSPKSSAAMEGSNDGGSVSKMLSGFQSS---ENRAVESA 150
Query: 487 LPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEXVLELTQT 666 +P QAF L N+ Q V S+A DP +W AV+ N+ +++ QT Sbjct: 151 VPQV-------------ALQAFAFLSENTAAQTVVASIASDPKVWDAVMENKDLMKFLQT 197
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 60.8 bits (146), Expect = 8e-08 Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 11/154 (7%) Frame = +1
Query: 250 EYSSDEDWGKLSY-NRLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKESPTMPVV 423 E ++++++G + +R+VF AP++EEVEEA +L +L SI S S ES ++P Sbjct: 86 EETNNDNFGHHPFRDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTA 145
Query: 424 ENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQ---------AFHLLQTNSK 576 + + + +E V Q AF LLQ N Sbjct: 146 VQKNGGSIEVSQCSDSESESSKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHT 205
Query: 577 VQDAVKSLARDPAIWKAVLSNEXVLELTQTLQEG 678 V++ V SL D AIW A+L NE V+E + L +G Sbjct: 206 VREMVISLVSDKAIWDALLKNEKVVEFRELLHKG 239
>tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 60.1 bits (144), Expect = 1e-07 Identities = 48/127 (37%), Positives = 64/127 (50%) Frame = +1
Query: 292 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 471 RLVF+ PS EE EEAT EL A+ + S VE VV+ + KEF + Sbjct: 101 RLVFAP-PSREEAEEATTELRDAIGRAYFNESPVE-------VVKEQNKEF------NKL 146
Query: 472 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEXVL 651 AT+ +P V QAF LL+++++ Q V SLA D +W AVL NE V+ Sbjct: 147 ATDAIIPSMPGH----------VVQAFTLLKSSTEAQSVVASLASDRNVWDAVLKNEKVM 196
Query: 652 ELTQTLQ 672 E +T Q Sbjct: 197 EFYKTHQ 203
>tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164415 PE=4 SV=1 Length = 352
Score = 55.5 bits (132), Expect = 3e-06 Identities = 58/219 (26%), Positives = 86/219 (39%), Gaps = 43/219 (19%) Frame = +1
Query: 127 FCHASTQEHSANMPSALHLSQKEASSGGVPSD--MRFLNADDLEYSSDEDW---GKLSYN 291 +CH + +++ P + S K + GG+ + + ++ ++ EDW G + Sbjct: 29 YCHCAPPPNAS--PRSRGASCKCKAVGGIHAHPGLSAVSYGPRQFWDGEDWEIAGDEERD 86
Query: 292 RLVFSTAPSEEEVEEATKELHAALHLSI-------------PASSSVEK----------- 399 VF + P+ EEVEEA+ +L AL L P SSS Sbjct: 87 HYVFGSLPTVEEVEEASSDLQNALRLGFFTPPPPKSEALPKPESSSSRSHPQSPRSSLGP 146
Query: 400 ------ESPTMPVVENEEKEF--------VPAIVNQERATEEQLPXXXXXXXXXXXXXXX 537 E T+ V E+E V +V + E L Sbjct: 147 VLVEATEMSTVTTVGEVEEEVTSNLSPLPVEPLVESKECIESPLYEVATSPKHSGAPSSA 206
Query: 538 VYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEXVLE 654 + +AF+ Q N +VQ V SLA D AIW AVLSNE + E Sbjct: 207 MLEAFYQFQHNPQVQGMVVSLATDKAIWDAVLSNEKIKE 245
>tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subsp. japonica GN=P0455A11.10 PE=4 SV=1 Length = 300
Score = 52.8 bits (125), Expect = 2e-05 Identities = 42/128 (32%), Positives = 62/128 (48%) Frame = +1
Query: 292 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 471 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 104 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 149
Query: 472 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEXVL 651 + +P V QAF LL+++ + Q V SLA D +W AVL NE V+ Sbjct: 150 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNEKVM 199
Query: 652 ELTQTLQE 675 E +T Q+ Sbjct: 200 EFYKTHQQ 207
>tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28043 PE=4 SV=1 Length = 240
Score = 52.8 bits (125), Expect = 2e-05 Identities = 42/128 (32%), Positives = 62/128 (48%) Frame = +1
Query: 292 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 471 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 44 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 89
Query: 472 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEXVL 651 + +P V QAF LL+++ + Q V SLA D +W AVL NE V+ Sbjct: 90 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNEKVM 139
Query: 652 ELTQTLQE 675 E +T Q+ Sbjct: 140 EFYKTHQQ 147
>tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g10390 PE=4 SV=1 Length = 288
Score = 50.4 bits (119), Expect = 1e-04 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%) Frame = +1
Query: 253 YSSDEDWGKLSYNRLVFSTAPSEEEVEEATKELHAALHLSIPAS----SSVEKESPTMPV 420 Y++ +DW + +R VF P+ EE AT +L + + A S + + PT + Sbjct: 52 YAAIDDW--VIPDREVFGPVPTHEEAMAATLDLKESFQFAKSAQLEPLPSGDLDVPTKGL 109
Query: 421 VENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSL 600 V +E + + E ++ V QAF +LQ + + Q+ V SL Sbjct: 110 VHSESSQGLIHSKTSEHEDNHEISLVSSGAPGR------VVQAFTMLQDSPEAQEVVASL 163
Query: 601 ARDPAIWKAVLSNEXVLELTQT 666 A D +W AV+ NE V++ +T Sbjct: 164 ASDQNVWNAVMRNEKVMKFYKT 185
>tr|A7Q5B8|A7Q5B8_VITVI Chromosome undetermined scaffold_52, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030873001 PE=4 SV=1 Length = 189
Score = 50.4 bits (119), Expect = 1e-04 Identities = 24/47 (51%), Positives = 32/47 (68%) Frame = +1
Query: 538 VYQAFHLLQTNSKVQDAVKSLARDPAIWKAVLSNEXVLELTQTLQEG 678 VY AFHLLQ+++ +Q V SL+ D +W AVL+NE V EL + EG Sbjct: 44 VYDAFHLLQSDTAIQRMVISLSSDNTVWDAVLNNEVVKELRELFYEG 90
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