DK959593
Clone id TST39A01NGRL0005_C01
Library
Length 401
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_C01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CCGAGTGTTTCCTAATGGCGAGGTGCAGTACCTTCATCCCAAGGACGGAGTATACCCCGA
GAAAGTGAACCCCGGCCGCAAGGGTGTTGGCGTGAACTTGCGCTCTATTGGAGAGAATGT
AAACCCCGCCACAGTCAAGTTCACTGGCAAGAACGCTTACGATTTGTGAGGAGCATGTTG
CTGACCCCTTTATGATTCTTTCTGTAAGTGGTCTGTGGCAAGCTCATGTCTTCTATCTTT
CATGATTGTAAAGTTTTTCTGTAATAGACTACTTCTTCCTCCGACGGTTCCAGTCTGAGA
GCTTGTCATAAGTTGAGTTCATTCTATGGACTTGAACTGTCTATGTTTGTTATGGAAGGT
ACCTAGCTTTACTGTTTGACAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9SA56
Definition sp|Q9SA56|PSAD2_ARATH Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana
Align length 55
Score (bit) 102.0
E-value 6.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C01, 5'
(380 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SA56|PSAD2_ARATH Photosystem I reaction center subunit II-2... 102 6e-22
sp|Q9S7H1|PSAD1_ARATH Photosystem I reaction center subunit II-1... 102 6e-22
sp|P32869|PSAD_CUCSA Photosystem I reaction center subunit II, c... 101 1e-21
sp|P12353|PSAD_SPIOL Photosystem I reaction center subunit II, c... 101 1e-21
sp|P36213|PSAD_HORVU Photosystem I reaction center subunit II, c... 99 6e-21
sp|P29302|PSAD_NICSY Photosystem I reaction center subunit II, c... 96 4e-20
sp|P12372|PSAD_SOLLC Photosystem I reaction center subunit II, c... 96 7e-20
sp|O78502|PSAD_GUITH Photosystem I reaction center subunit II OS... 84 2e-16
sp|P51279|PSAD_PORPU Photosystem I reaction center subunit II OS... 82 8e-16
sp|Q9T4W8|PSAD_CYAPA Photosystem I reaction center subunit II, c... 81 1e-15
sp|Q1XDK7|PSAD_PORYE Photosystem I reaction center subunit II OS... 80 3e-15
sp|O96800|PSAD_SKECO Photosystem I reaction center subunit II OS... 80 4e-15
sp|P49481|PSAD_ODOSI Photosystem I reaction center subunit II OS... 80 4e-15
sp|Q39615|PSAD_CHLRE Photosystem I reaction center subunit II, c... 80 4e-15
sp|P31089|PSAD_ANAVT Photosystem I reaction center subunit II OS... 79 7e-15
sp|P19569|PSAD_SYNY3 Photosystem I reaction center subunit II OS... 78 2e-14
sp|Q9TLR2|PSAD_CYACA Photosystem I reaction center subunit II OS... 77 2e-14
sp|P58573|PSAD_ANASP Photosystem I reaction center subunit II OS... 76 6e-14
sp|P0A422|PSAD_THEVL Photosystem I reaction center subunit II OS... 75 1e-13
sp|P0A420|PSAD_THEEB Photosystem I reaction center subunit II OS... 75 1e-13
sp|P0A421|PSAD_SYNEN Photosystem I reaction center subunit II OS... 75 1e-13
sp|O07115|PSAD_MASLA Photosystem I reaction center subunit II OS... 75 1e-13
sp|P23076|PSAD_SYNP6 Photosystem I reaction center subunit II OS... 74 2e-13
sp|P56596|PSAD_NOSS8 Photosystem I reaction center subunit II OS... 71 2e-12
sp|P23808|PSAD_FREDI Photosystem I reaction center subunit II OS... 68 2e-11
sp|Q7NF26|PSAD_GLOVI Photosystem I reaction center subunit II OS... 65 1e-10
sp|P59785|ALGA_PSEFL Alginate biosynthesis protein algA OS=Pseud... 31 2.2
sp|Q8NFU7|TET1_HUMAN Protein TET1 OS=Homo sapiens GN=TET1 PE=2 SV=2 30 3.7
sp|Q1RM03|TCHP_DANRE Trichoplein keratin filament-binding protei... 29 6.3

>sp|Q9SA56|PSAD2_ARATH Photosystem I reaction center subunit II-2,
chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1
Length = 204

Score = 102 bits (254), Expect = 6e-22
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEK NPGR+GVG+N+RSIG+NV+P VKFTGK +YDL
Sbjct: 150 RVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL 204


>sp|Q9S7H1|PSAD1_ARATH Photosystem I reaction center subunit II-1,
chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1
Length = 208

Score = 102 bits (254), Expect = 6e-22
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEK NPGR+GVG+N+RSIG+NV+P VKFTGK +YDL
Sbjct: 154 RVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL 208


>sp|P32869|PSAD_CUCSA Photosystem I reaction center subunit II,
chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1
Length = 207

Score = 101 bits (252), Expect = 1e-21
Identities = 46/55 (83%), Positives = 49/55 (89%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG+NV+P VKFTGK YDL
Sbjct: 153 RVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 207


>sp|P12353|PSAD_SPIOL Photosystem I reaction center subunit II,
chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2
Length = 212

Score = 101 bits (251), Expect = 1e-21
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFP+GEVQYLHPKDGVYPEKVNPGR+GVG+N+RSIG+NV+P VKFTGK YDL
Sbjct: 158 RVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212


>sp|P36213|PSAD_HORVU Photosystem I reaction center subunit II,
chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1
Length = 205

Score = 99.0 bits (245), Expect = 6e-21
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVN GR+GVG N RSIG+NV+P VKFTGKN++D+
Sbjct: 151 RVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNVSPIEVKFTGKNSFDI 205


>sp|P29302|PSAD_NICSY Photosystem I reaction center subunit II,
chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1
Length = 204

Score = 96.3 bits (238), Expect = 4e-20
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVN GR+GVG N RSIG+N +P VKFTGK YDL
Sbjct: 150 RVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 204


>sp|P12372|PSAD_SOLLC Photosystem I reaction center subunit II,
chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1
Length = 208

Score = 95.5 bits (236), Expect = 7e-20
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG+N + VKFTGK YD+
Sbjct: 154 RVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNKSAIEVKFTGKQVYDI 208


>sp|O78502|PSAD_GUITH Photosystem I reaction center subunit II
OS=Guillardia theta GN=psaD PE=3 SV=1
Length = 141

Score = 84.3 bits (207), Expect = 2e-16
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYD 163
R+FP+GEVQYLHPKDGV+PEKVNPGR GVG SIG+N+NPA +KFT K+ D
Sbjct: 88 RIFPSGEVQYLHPKDGVFPEKVNPGRIGVGNVSHSIGKNLNPAQIKFTNKSFCD 141


>sp|P51279|PSAD_PORPU Photosystem I reaction center subunit II
OS=Porphyra purpurea GN=psaD PE=3 SV=1
Length = 141

Score = 82.0 bits (201), Expect = 8e-16
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYD 163
RVFPNGEVQYLHPKDGV+PEKVN GR + SIG+NVNP VKFT K YD
Sbjct: 88 RVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDHSIGKNVNPINVKFTNKATYD 141


>sp|Q9T4W8|PSAD_CYAPA Photosystem I reaction center subunit II,
cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1
Length = 220

Score = 81.3 bits (199), Expect = 1e-15
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYD 163
RV+P+GEVQ+LHPKDGV+PEKVNPGR VG N R IG+N +PA +KF G+ +D
Sbjct: 162 RVYPSGEVQFLHPKDGVFPEKVNPGRVAVGSNKRRIGQNPDPAKLKFKGQETFD 215


tr_hit_id A5AEB4
Definition tr|A5AEB4|A5AEB4_VITVI Putative uncharacterized protein (Chromosome chr5 scaffold_2, whole genome shotgun sequence) OS=Vitis vinifera
Align length 55
Score (bit) 107.0
E-value 3.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C01, 5'
(380 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5AEB4|A5AEB4_VITVI Putative uncharacterized protein (Chromos... 107 3e-22
tr|A9NL03|A9NL03_PICSI Putative uncharacterized protein OS=Picea... 107 4e-22
tr|A9NMK6|A9NMK6_PICSI Putative uncharacterized protein OS=Picea... 103 3e-21
tr|A8C183|A8C183_CITSI PSI reaction center subunit II OS=Citrus ... 103 4e-21
tr|A9PGC7|A9PGC7_POPTR Putative uncharacterized protein OS=Popul... 103 5e-21
tr|A7PUB0|A7PUB0_VITVI Chromosome chr7 scaffold_31, whole genome... 103 5e-21
tr|A8C1B5|A8C1B5_CITSI PSI reaction center subunit II OS=Citrus ... 102 9e-21
tr|Q0VJA0|Q0VJA0_PLAAC Photosystem I reaction center subunit II ... 102 1e-20
tr|A9PJR8|A9PJR8_POPJC Putative uncharacterized protein OS=Popul... 101 2e-20
tr|A9PIP5|A9PIP5_POPJC Putative uncharacterized protein OS=Popul... 101 2e-20
tr|A8C172|A8C172_CITSI PSI reaction center subunit II OS=Citrus ... 101 2e-20
tr|Q9M713|Q9M713_MAIZE Ferredoxin-binding subunit OS=Zea mays GN... 100 3e-20
tr|B6SKI1|B6SKI1_MAIZE Photosystem I reaction center subunit II ... 100 3e-20
tr|B4FX51|B4FX51_MAIZE Putative uncharacterized protein OS=Zea m... 100 3e-20
tr|A9PI11|A9PI11_POPTR Putative uncharacterized protein OS=Popul... 100 5e-20
tr|A8C1A1|A8C1A1_CITSI PSI reaction center subunit II OS=Citrus ... 100 5e-20
tr|B6TXC1|B6TXC1_MAIZE Photosystem I reaction center subunit II ... 100 6e-20
tr|B4FAW3|B4FAW3_MAIZE Photosystem I reaction center subunit II ... 100 6e-20
tr|A5BK28|A5BK28_VITVI Putative uncharacterized protein (Fragmen... 99 8e-20
tr|Q84PB4|Q84PB4_ORYSJ Os08g0560900 protein OS=Oryza sativa subs... 99 1e-19
tr|Q40434|Q40434_NICSY PSI-D1 OS=Nicotiana sylvestris GN=psaDb P... 99 1e-19
tr|A2YY54|A2YY54_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19
tr|A5Z2K3|A5Z2K3_SOYBN Photosystem I subunit PsaD OS=Glycine max... 98 2e-19
tr|Q70PN9|Q70PN9_SOLTU Putative photosystem I reaction centre PS... 96 1e-18
tr|A9REG3|A9REG3_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18
tr|O04010|O04010_PICAB Subunit II of photosystem I (Fragment) OS... 94 3e-18
tr|A9SRC8|A9SRC8_PHYPA Predicted protein OS=Physcomitrella paten... 94 3e-18
tr|A9SGR0|A9SGR0_PHYPA Predicted protein (Fragment) OS=Physcomit... 94 3e-18
tr|A9RBZ9|A9RBZ9_PHYPA Predicted protein OS=Physcomitrella paten... 94 3e-18
tr|A4S7X2|A4S7X2_OSTLU PsaD, PSI-D, subunit II, photosystem I pr... 86 7e-16

>tr|A5AEB4|A5AEB4_VITVI Putative uncharacterized protein (Chromosome
chr5 scaffold_2, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00019961001 PE=4 SV=1
Length = 204

Score = 107 bits (267), Expect = 3e-22
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVGVN RSIG+NVNP VKFTGK AYDL
Sbjct: 150 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNFRSIGKNVNPIEVKFTGKQAYDL 204


>tr|A9NL03|A9NL03_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 234

Score = 107 bits (266), Expect = 4e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVN RSIG+NVNP+ VKFTGK YD+
Sbjct: 180 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNFRSIGKNVNPSQVKFTGKQTYDV 234


>tr|A9NMK6|A9NMK6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 234

Score = 103 bits (258), Expect = 3e-21
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVY EKVNPGRKGVGVN RSIG+NVNP+ VKFTGK YD+
Sbjct: 180 RVFPNGEVQYLHPKDGVYQEKVNPGRKGVGVNFRSIGKNVNPSQVKFTGKQTYDV 234


>tr|A8C183|A8C183_CITSI PSI reaction center subunit II OS=Citrus
sinensis GN=psaDa PE=2 SV=1
Length = 209

Score = 103 bits (257), Expect = 4e-21
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVGVN RSIG+NV+P VKFTGK YDL
Sbjct: 155 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYDL 209


>tr|A9PGC7|A9PGC7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 201

Score = 103 bits (256), Expect = 5e-21
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG+NV+P VKFTGK AYDL
Sbjct: 147 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 201


>tr|A7PUB0|A7PUB0_VITVI Chromosome chr7 scaffold_31, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023726001
PE=4 SV=1
Length = 204

Score = 103 bits (256), Expect = 5e-21
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG+NV+P VKFTGK AYDL
Sbjct: 150 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQAYDL 204


>tr|A8C1B5|A8C1B5_CITSI PSI reaction center subunit II OS=Citrus
sinensis GN=psaDa PE=2 SV=1
Length = 209

Score = 102 bits (254), Expect = 9e-21
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG+N RSIG+NV+P VKFTGK YDL
Sbjct: 155 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGLNYRSIGKNVSPIEVKFTGKQVYDL 209


>tr|Q0VJA0|Q0VJA0_PLAAC Photosystem I reaction center subunit II
(Fragment) OS=Platanus acerifolia GN=psad PE=2 SV=1
Length = 122

Score = 102 bits (253), Expect = 1e-20
Identities = 46/55 (83%), Positives = 48/55 (87%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG+N NP VKFTGK YDL
Sbjct: 68 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNANPIEVKFTGKQVYDL 122


>tr|A9PJR8|A9PJR8_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 201

Score = 101 bits (252), Expect = 2e-20
Identities = 46/55 (83%), Positives = 49/55 (89%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG+NV+P VKFTGK YDL
Sbjct: 147 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 201


>tr|A9PIP5|A9PIP5_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 166

Score = 101 bits (252), Expect = 2e-20
Identities = 46/55 (83%), Positives = 49/55 (89%)
Frame = +2

Query: 2 RVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGENVNPATVKFTGKNAYDL 166
RVFPNGEVQYLHPKDGVYPEKVNPGR+GVG N RSIG+NV+P VKFTGK YDL
Sbjct: 112 RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNVSPIEVKFTGKQVYDL 166