DK959604 [AcEST]

DK959604
Clone id	TST39A01NGRL0005_C12
Library	TST39
Length	627
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_C12. 5' end sequence.
Accession	DK959604
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL1648Contig1
Sequence	ACACACACATTGCTCCGTCGTCCCTTTAGCATGGCTGCTTCTTCTTCATGAGAAAGCCAG TACCCATCTCACCATCGCACCCCTTTCAGGCCACATACTGTGACTGCTCTTTCCTGCCAT AGATAGGCAGGTGAAGAAGAGACCCCCTCCAGCGCCAGGAGAAGGTGACAAGATGTCATC TGGTAAAGAAGGAAAAGAGGGAAAGGAGGGAGCTGCAGCCAAAGTTGCTGGTGCAGCAGT GGCAGTTGGAGTTGCATGGGGCATTTTCAGATTTGTGAAGGCGAAAAAAGAAGAGGACGC CCTCATTCAAGAGTATTATGGAGATCGAGAGGATTTTACTCTTCCTGATGGAGACCGTAA CGATTATGATGCATATTATGTCTACCCTCCCCAGCAAGTTGAGTTTGTGAAGGTGGACCC AACCTCCTCCCCCTCCTCCTATGGTTATTCCTCCTCATTCAGATGAGCTGAAAAGTGTAC CAGAGGAGGAAATCAAAGCAACAGAAAAAGTGGAACCTCCTCCACCTGAGCCAGAGGCTG ATGAGAAGCCCAAGGTCGAGGAAAAAGCCCTGGTTCCTTCGCCTTTTTGATCCACCCCAG AAAACTGATTGCAAGCCCAAGCTGAAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O35066
Definition	sp\|O35066\|KIF3C_MOUSE Kinesin-like protein KIF3C OS=Mus musculus
Align length	58
Score (bit)	30.4
E-value	7.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK959604\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_C12, 5' (627 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O35066\|KIF3C_MOUSE Kinesin-like protein KIF3C OS=Mus musculus... 30 7.7 >sp\|O35066\|KIF3C_MOUSE Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=2 Length = 796 Score = 30.4 bits (67), Expect = 7.7 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +3 Query: 147 LQRQEKVTRCHLVKKEKRERRELQPKLLVQQWQ-LELHGAFSDL*RRKKKRTPSFKSI 317 L+RQE + ++KR RE+Q ++LV+ + +EL G +S L + + +T K + Sbjct: 543 LKRQE-------IAEQKRREREMQQEMLVRDEETMELRGTYSSLQQEVEVKTKKLKKL 593
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B1BYK9
Definition	tr\|B1BYK9\|B1BYK9_9FIRM Putative uncharacterized protein OS=Clostridium spiroforme DSM 1552
Align length	72
Score (bit)	33.9
E-value	8.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK959604\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_C12, 5' (627 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B1BYK9\|B1BYK9_9FIRM Putative uncharacterized protein OS=Clost... 34 8.1 >tr\|B1BYK9\|B1BYK9_9FIRM Putative uncharacterized protein OS=Clostridium spiroforme DSM 1552 GN=CLOSPI_00033 PE=4 SV=1 Length = 488 Score = 33.9 bits (76), Expect = 8.1 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = +3 Query: 189 KEKRERRELQPKLLVQQWQLELHGAFSDL*RRKKKRTPSFKSIMEIERILLFLMETVTIM 368 K K+E + L+ KLL + +L H DL R + F ++ ++E+ L +E + + Sbjct: 310 KNKKEDKTLEIKLLSDEKELAEHNMLVDLGRNDLGKISKFNTV-KVEK--LHSVERYSHV 366 Query: 369 MHIMSTLPSKLS 404 MHI ST+ S++S Sbjct: 367 MHIGSTIRSEIS 378