| DK959607 |
| Clone id |
TST39A01NGRL0005_C15 |
| Library |
TST39 |
| Length |
668 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_C15. 5' end sequence. |
| Accession |
DK959607 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL20Contig1 |
| Sequence |
AGCTTCCATGGCTTCCTCCGTTGCCTCCCCCGCTGTTGCATCGCTTCAAGCTGTCCAGGG
CTTAGGACCGTCCCCTTGCACTGGGCAGGCAGTGCCTGCGTCGGCATTCCTTGGAGCTGG
ATTGAAGAAGTCCAACATCTCCATCACACCGGCAACTAGCTCTGCAAAGCCATTGGTGGT
GCACGCTTCGGAGGATGAGTCGAAGCAGACCAAGAAGGATAAATGGGCAGGACTTGCATA
CGACACTTCCGATGATCAGCAAGACATTACAAGAGGGAAAGGGATGGTGGATGCCCTCTT
CCAAGGGGCAGTTGGCTTGGGTACCCAGCATGCTGTCATGAGTTCCTACGAGTACATCAG
CACTGGTCAGAGGACTTTCCAGATGGACAACATGAAGGATGGGTACTACATCGCACCGGC
TTTCATGGACAAGTTGGTGGTGCACATTGCCAAGAACTTTATGAACCTTCCCAATATTAA
GATTCCTTTGATTCTTGGTATTTGGGGTGGAAAAGGACAAGGAAAATCTTTCCAGTGTGA
ACTAGTGTTCTCAAAGCTTGGAATCAACCCCATCATGATGAGTGCTGGTGAGCTCGAGAG
TGGAAATGCTGGTGAACCCGCCAAGCTCATTCGACAGAGATACCGTGAAGCTGCGGATGT
GATTCGAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q40281 |
| Definition |
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica |
| Align length |
193 |
| Score (bit) |
289.0 |
| E-value |
8.0e-78 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959607|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C15, 5'
(668 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 289 8e-78
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 282 1e-75
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 282 1e-75
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 281 2e-75
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 281 3e-75
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 273 5e-73
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 272 1e-72
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 272 1e-72
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 270 4e-72
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 268 1e-71
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 268 1e-71
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 266 1e-70
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 265 2e-70
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 263 8e-70
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 256 8e-68
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 209 1e-53
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 126 1e-28
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 125 2e-28
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 107 7e-23
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 50 8e-06
sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_... 34 0.61
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ... 33 1.0
sp|Q9JJG0|TACC2_MOUSE Transforming acidic coiled-coil-containing... 33 1.4
sp|Q9Y6K8|KAD5_HUMAN Adenylate kinase isoenzyme 5 OS=Homo sapien... 33 1.4
sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing prote... 33 1.8
sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE... 33 1.8
sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio... 32 2.3
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ... 32 2.3
sp|P42375|CH60_PORGI 60 kDa chaperonin OS=Porphyromonas gingival... 32 2.3
sp|Q9HPF0|CDCH_HALSA Protein cdcH OS=Halobacterium salinarium GN... 32 2.3
>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Malus domestica GN=RCA PE=2
SV=1
Length = 437
Score = 289 bits (740), Expect = 8e-78
Identities = 143/193 (74%), Positives = 160/193 (82%)
Frame = +2
Query: 89 AVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDI 268
+VP+S FLG+ LKK N T + S+ L + AS DE KQT KD+W GLA+DTSDDQQDI
Sbjct: 26 SVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDI 85
Query: 269 TRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHI 448
TRGKG VD+LFQ G GT A+MSSYEYISTG R + DN DGYYIAPAFMDKLVVHI
Sbjct: 86 TRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHI 145
Query: 449 AKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKL 628
KNFM LPN+K+PLILGIWGGKGQGKSFQCELVF+K+ I+PIMMSAGELESGNAGEPAKL
Sbjct: 146 TKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKL 205
Query: 629 IRQRYREAADVIR 667
IRQRYREAAD+IR
Sbjct: 206 IRQRYREAADIIR 218
>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
PE=2 SV=1
Length = 435
Score = 282 bits (721), Expect = 1e-75
Identities = 142/202 (70%), Positives = 159/202 (78%)
Frame = +2
Query: 62 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 241
L S VP++AF G+ LKKS P SS +V E +QT KDKW GLAY
Sbjct: 18 LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76
Query: 242 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 421
D SDDQQDITRGKGMVD LFQ + GT +AVMSSY+YIS G R + +DN DG+YIAPA
Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136
Query: 422 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 601
FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196
Query: 602 GNAGEPAKLIRQRYREAADVIR 667
GNAGEPAKLIRQRYREAAD+I+
Sbjct: 197 GNAGEPAKLIRQRYREAADIIK 218
>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
PE=2 SV=1
Length = 476
Score = 282 bits (721), Expect = 1e-75
Identities = 142/202 (70%), Positives = 159/202 (78%)
Frame = +2
Query: 62 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 241
L S VP++AF G+ LKKS P SS +V E +QT KDKW GLAY
Sbjct: 18 LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76
Query: 242 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 421
D SDDQQDITRGKGMVD LFQ + GT +AVMSSY+YIS G R + +DN DG+YIAPA
Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136
Query: 422 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 601
FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196
Query: 602 GNAGEPAKLIRQRYREAADVIR 667
GNAGEPAKLIRQRYREAAD+I+
Sbjct: 197 GNAGEPAKLIRQRYREAADIIK 218
>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
SV=2
Length = 439
Score = 281 bits (720), Expect = 2e-75
Identities = 142/198 (71%), Positives = 159/198 (80%), Gaps = 4/198 (2%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKKSNISITP----ATSSAKPLVVHASEDESKQTKKDKWAGLAYDTS 250
G + P SAF G LKK+ S P S K + +ES+QT KD+W GLAYD S
Sbjct: 24 GASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDIS 83
Query: 251 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 430
DDQQDITRGKGMVD LFQ + GT +AVMSSYEY+STG R Q+DN+KDG+YIAPAF+D
Sbjct: 84 DDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLD 141
Query: 431 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 610
KLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 142 KLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 201
Query: 611 GEPAKLIRQRYREAADVI 664
GEPAKLIRQRYREAAD+I
Sbjct: 202 GEPAKLIRQRYREAADLI 219
>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
Length = 413
Score = 281 bits (718), Expect = 3e-75
Identities = 139/195 (71%), Positives = 159/195 (81%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 262
G VP SAFLG+ LK S+ T + +V A +DE KQT+KDKW GLA+DTSDDQQ
Sbjct: 22 GGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIV-AEQDEEKQTEKDKWRGLAFDTSDDQQ 80
Query: 263 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 442
DITRGKG+ D LFQ +G GT +AV+SSYEYIS G R + DN DG+YIAPAFMDKL V
Sbjct: 81 DITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTV 140
Query: 443 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA 622
HI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA
Sbjct: 141 HIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPA 200
Query: 623 KLIRQRYREAADVIR 667
KLIRQRYREAAD+I+
Sbjct: 201 KLIRQRYREAADIIK 215
>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
PE=2 SV=1
Length = 441
Score = 273 bits (699), Expect = 5e-73
Identities = 134/199 (67%), Positives = 164/199 (82%), Gaps = 4/199 (2%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 250
G + P+SAF G LKK S + + TS + +V E +E++QT+ D+W GLAYD S
Sbjct: 24 GASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVS 83
Query: 251 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 430
DDQQDITRGKG+VD+LFQ + GT +AV+SS++Y+S G R + DN+KDG+YIAPAF+D
Sbjct: 84 DDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLD 143
Query: 431 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 610
KLVVHIAKNFM LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 144 KLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 203
Query: 611 GEPAKLIRQRYREAADVIR 667
GEPAKLIRQRYREA+D+I+
Sbjct: 204 GEPAKLIRQRYREASDLIK 222
>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 442
Score = 272 bits (696), Expect = 1e-72
Identities = 135/199 (67%), Positives = 155/199 (77%), Gaps = 4/199 (2%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 250
G +VP++AF G LKK +S T+ + +V + D KQT D+W GL D S
Sbjct: 24 GTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFS 83
Query: 251 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 430
DDQQDITRGKGMVD+LFQ G GT HAV+ SYEY+S G R + +DN DG+YIAPAFMD
Sbjct: 84 DDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMD 143
Query: 431 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 610
KLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF K+GINPIMMSAGELESGNA
Sbjct: 144 KLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNA 203
Query: 611 GEPAKLIRQRYREAADVIR 667
GEPAKLIRQRYREAA++IR
Sbjct: 204 GEPAKLIRQRYREAAEIIR 222
>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
PE=1 SV=2
Length = 474
Score = 272 bits (695), Expect = 1e-72
Identities = 136/194 (70%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
Frame = +2
Query: 89 AVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQD 265
+ PAS FLG + S + + S+ V+ ED KQT D+W GLAYDTSDDQQD
Sbjct: 27 SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKED--KQTDGDRWRGLAYDTSDDQQD 84
Query: 266 ITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVH 445
ITRGKGMVD++FQ +G GT HAV+SSYEY+S G R + +DNM DG+YIAPAFMDKLVVH
Sbjct: 85 ITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVH 144
Query: 446 IAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAK 625
I KNF+ LPNIK+PLILGIWGGKGQGKSFQCELV +K+GINPIMMSAGELESGNAGEPAK
Sbjct: 145 ITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAK 204
Query: 626 LIRQRYREAADVIR 667
LIRQRYREAAD+I+
Sbjct: 205 LIRQRYREAADLIK 218
>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Oryza sativa subsp. japonica
GN=RCA PE=1 SV=2
Length = 466
Score = 270 bits (691), Expect = 4e-72
Identities = 140/198 (70%), Positives = 157/198 (79%), Gaps = 7/198 (3%)
Frame = +2
Query: 95 PASA---FLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSD 253
PAS FLG LKK S ++ +S+ V A E DE KQT +D+W GLAYD SD
Sbjct: 12 PASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISD 71
Query: 254 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 433
DQQDITRGKG VD+LFQ G GT AV+SSYEY+S G RT+ DN G+YIAPAFMDK
Sbjct: 72 DQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDK 131
Query: 434 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 613
LVVHI+KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG
Sbjct: 132 LVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 191
Query: 614 EPAKLIRQRYREAADVIR 667
EPAKLIRQRYREAAD+I+
Sbjct: 192 EPAKLIRQRYREAADIIK 209
>sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Solanum pennellii PE=2 SV=1
Length = 459
Score = 268 bits (686), Expect = 1e-71
Identities = 134/198 (67%), Positives = 158/198 (79%), Gaps = 3/198 (1%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSD 253
G +VP++AF G LKK +S +P S+ VV DE TK+D+W GL +TSD
Sbjct: 24 GTSVPSTAFFGKSLKKVYAKGVS-SPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSD 79
Query: 254 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 433
DQQDI RGKG+VD+LFQ G GT HA+M+SYEY+S +T+Q+DN DG+YIAPAFMDK
Sbjct: 80 DQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDK 139
Query: 434 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 613
LVVHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF K+GINPIMMSAGELESGNAG
Sbjct: 140 LVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAG 199
Query: 614 EPAKLIRQRYREAADVIR 667
EPAKLIRQRYREAA++IR
Sbjct: 200 EPAKLIRQRYREAAEIIR 217
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7PIQ8 |
| Definition |
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
195 |
| Score (bit) |
296.0 |
| E-value |
8.0e-79 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959607|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C15, 5'
(668 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 296 8e-79
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 295 1e-78
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 293 5e-78
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 293 5e-78
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 288 2e-76
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 286 8e-76
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 286 8e-76
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=... 285 1e-75
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 283 7e-75
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 283 7e-75
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 283 7e-75
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 282 1e-74
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 282 2e-74
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 282 2e-74
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 281 2e-74
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 281 2e-74
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea... 281 2e-74
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea... 281 2e-74
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea... 281 2e-74
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten... 281 3e-74
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 278 2e-73
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 278 3e-73
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 276 8e-73
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 275 2e-72
tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 275 2e-72
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ... 275 2e-72
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 274 3e-72
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 272 2e-71
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 272 2e-71
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 272 2e-71
>tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018440001
PE=4 SV=1
Length = 438
Score = 296 bits (758), Expect = 8e-79
Identities = 146/195 (74%), Positives = 163/195 (83%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 262
G +VP+SAFLG+ LKK N T + S+ V A D+ QT+KDKW GLA+DTSDDQQ
Sbjct: 25 GASVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGLAFDTSDDQQ 84
Query: 263 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 442
DI RGKGMVD+LFQ + GT +AVMSSYEYISTG R + +DN DG+YIAPAFMDKLVV
Sbjct: 85 DIVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLVV 144
Query: 443 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA 622
HI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEPA
Sbjct: 145 HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPA 204
Query: 623 KLIRQRYREAADVIR 667
KLIRQRYREAAD+IR
Sbjct: 205 KLIRQRYREAADIIR 219
>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
PE=4 SV=1
Length = 474
Score = 295 bits (756), Expect = 1e-78
Identities = 146/196 (74%), Positives = 163/196 (83%)
Frame = +2
Query: 80 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 259
TG +VP+SAFLG LKK + I +S+ V A DE KQT KDKW GLA+D SDDQ
Sbjct: 23 TGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQ 82
Query: 260 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 439
QDITRGKGMVD+LFQ + GT +AVMSSY+YISTG R + +DN DG+YIAPAFMDKLV
Sbjct: 83 QDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLV 142
Query: 440 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 619
VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 202
Query: 620 AKLIRQRYREAADVIR 667
AKLIRQRYREAAD+IR
Sbjct: 203 AKLIRQRYREAADIIR 218
>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
PE=4 SV=1
Length = 472
Score = 293 bits (751), Expect = 5e-78
Identities = 144/196 (73%), Positives = 164/196 (83%)
Frame = +2
Query: 80 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 259
TG +VP+SAF G+ LKK + T ++ V A DE++QT+KD+W GLAYD SDDQ
Sbjct: 23 TGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82
Query: 260 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 439
QDITRGKGMVD+LFQ + GT +AVMSSYEY+STG R + +DN DG+YIAPAFMDKLV
Sbjct: 83 QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142
Query: 440 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 619
VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEP 202
Query: 620 AKLIRQRYREAADVIR 667
AKLIRQRYREAAD+IR
Sbjct: 203 AKLIRQRYREAADIIR 218
>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039112 PE=4 SV=1
Length = 472
Score = 293 bits (751), Expect = 5e-78
Identities = 144/196 (73%), Positives = 164/196 (83%)
Frame = +2
Query: 80 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 259
TG +VP+SAF G+ LKK + T ++ V A DE++QT+KD+W GLAYD SDDQ
Sbjct: 23 TGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82
Query: 260 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 439
QDITRGKGMVD+LFQ + GT +AVMSSYEY+STG R + +DN DG+YIAPAFMDKLV
Sbjct: 83 QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142
Query: 440 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 619
VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEP 202
Query: 620 AKLIRQRYREAADVIR 667
AKLIRQRYREAAD+IR
Sbjct: 203 AKLIRQRYREAADIIR 218
>tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedeschia
aethiopica GN=rca4 PE=2 SV=1
Length = 435
Score = 288 bits (738), Expect = 2e-76
Identities = 147/197 (74%), Positives = 164/197 (83%), Gaps = 1/197 (0%)
Frame = +2
Query: 80 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSDD 256
+G +V S FLG LK N S+ +S L V A++ DESKQTK D+WAGL DTSDD
Sbjct: 20 SGASVTRSGFLGTSLKTVNPSLGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDD 79
Query: 257 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 436
QQDITRGKGMVD+LFQ +G GT + V+SSYEYISTG R+F +DN +G YIAPAFMDKL
Sbjct: 80 QQDITRGKGMVDSLFQAPMGDGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKL 139
Query: 437 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 616
VVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGE
Sbjct: 140 VVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 199
Query: 617 PAKLIRQRYREAADVIR 667
PAKLIRQRYREAAD+IR
Sbjct: 200 PAKLIRQRYREAADIIR 216
>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase small protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 437
Score = 286 bits (732), Expect = 8e-76
Identities = 145/202 (71%), Positives = 161/202 (79%)
Frame = +2
Query: 62 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 241
L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY
Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 242 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 421
DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAPA
Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136
Query: 422 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 601
FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196
Query: 602 GNAGEPAKLIRQRYREAADVIR 667
GNAGEPAKLIRQRYREAAD+I+
Sbjct: 197 GNAGEPAKLIRQRYREAADIIK 218
>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase large protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 474
Score = 286 bits (732), Expect = 8e-76
Identities = 145/202 (71%), Positives = 161/202 (79%)
Frame = +2
Query: 62 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 241
L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY
Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 242 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 421
DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAPA
Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136
Query: 422 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 601
FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196
Query: 602 GNAGEPAKLIRQRYREAADVIR 667
GNAGEPAKLIRQRYREAAD+I+
Sbjct: 197 GNAGEPAKLIRQRYREAADIIK 218
>tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=2
SV=1
Length = 373
Score = 285 bits (730), Expect = 1e-75
Identities = 141/196 (71%), Positives = 162/196 (82%)
Frame = +2
Query: 80 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 259
TG +P +AF G+ LKK N +T +A + A +DE KQT KD+W GLA+DTSDDQ
Sbjct: 24 TGGLLPNTAFFGSSLKKMNSRLTNPRIAAGNIKAVADDDEEKQTSKDRWGGLAFDTSDDQ 83
Query: 260 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 439
QDITRGKGMVD+LFQ + GT +AVMSSYEY+STG R + +DN DG+YIAPAFMDKLV
Sbjct: 84 QDITRGKGMVDSLFQAPMQTGTHYAVMSSYEYLSTGLRQY-LDNNMDGFYIAPAFMDKLV 142
Query: 440 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 619
VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEP
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 202
Query: 620 AKLIRQRYREAADVIR 667
AKLIRQR REAAD+I+
Sbjct: 203 AKLIRQRCREAADIIK 218
>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 461
Score = 283 bits (724), Expect = 7e-75
Identities = 141/197 (71%), Positives = 159/197 (80%), Gaps = 2/197 (1%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKKSNIS--ITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDD 256
G VP SAF G LKK + S SS VV DE KQT+KD+W GL D SDD
Sbjct: 24 GSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDD 83
Query: 257 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 436
QQDITRGKGMVD+LFQ G GT + V+SSYEY+S G RT+ +DNM DGYYIAPAFMDK+
Sbjct: 84 QQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDKI 143
Query: 437 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 616
VVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGE
Sbjct: 144 VVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGE 203
Query: 617 PAKLIRQRYREAADVIR 667
PAKLIRQRYREAAD+I+
Sbjct: 204 PAKLIRQRYREAADIIK 220
>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 476
Score = 283 bits (724), Expect = 7e-75
Identities = 141/196 (71%), Positives = 159/196 (81%), Gaps = 1/196 (0%)
Frame = +2
Query: 83 GQAVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 259
G VP SAF G LKK S+ T + S+ V A DE KQT KD+W GL D SDDQ
Sbjct: 24 GSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQ 83
Query: 260 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 439
QDITRGKGMVD+LFQ G GT + ++SSYEY+S G RT+ +DN DGYYIAPAFMDKLV
Sbjct: 84 QDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLV 143
Query: 440 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 619
VHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEP
Sbjct: 144 VHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 203
Query: 620 AKLIRQRYREAADVIR 667
AKLIRQRYREAAD+I+
Sbjct: 204 AKLIRQRYREAADIIK 219
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