DK959608
Clone id TST39A01NGRL0005_C16
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_C16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGGGTTGCCTGCACACAAATGCATTATAGCATTATCGTTCACACATCAAATTCCCACAAA
AGGTAGACTTTTTTGCAGGGCATGTAAGAGGAGCTTGTGAGGACGGAGTTCTGATACACA
GATCGATACGGCTGCGCATGCAACGCTGATTCTGTTTACAGAAAAGCATGAGAAGCTTCC
TCCTGCAGCAGAGGGTTTGCCTTGATGTGTGAAATCACAAGCGTCTTTGCATTAGCTGGA
CATTCTTGGAAGTTCACACAGGGGTTTTGTACTCCATCAGAGAATATATTTTGAGGAGCT
TCATCTGATACCGGGTTGAGAGCCATCCACGTCTGTGTTGGTGCAGATGAGAGGGTCCGA
AGCATTAGGAGGGCTGATATGAGCTTCCCTTGATATCGAACAGGTTAAAGCCATGGAGAT
CAACATCAGAGGGGGCGACAAAAGCTCTCTGGCTTTACTTTCTAGCAAAAGAGGTAGAGC
ATATGCAAGGACAAGGGCAGATGAGGCTTTCGCTTTACCTAATTTTTCAGACGCCATACC
CGTCTCAACAATAGAGCTGCAGCAGCGCCCGGCAAATAATACTGCAAGATCAGAGCCGCC
TGTGGAACATGAGGCAGAAAATGTAAAGCAGACAATGCTGCAACATGAGTCTGTATTCAA
AGA
■■Homology search results ■■ -
sp_hit_id Q45389
Definition sp|Q45389|BUGT_BORPE Protein bugT OS=Bordetella pertussis
Align length 93
Score (bit) 32.0
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959608|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C16, 5'
(663 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q45389|BUGT_BORPE Protein bugT OS=Bordetella pertussis GN=bug... 32 3.0
sp|Q18E67|RPIA_HALWD Ribose-5-phosphate isomerase A OS=Haloquadr... 31 6.7

>sp|Q45389|BUGT_BORPE Protein bugT OS=Bordetella pertussis GN=bugT
PE=3 SV=2
Length = 326

Score = 32.0 bits (71), Expect = 3.0
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Frame = +2

Query: 359 EALGGLI*ASLDIEQVKAMEINIRGGDKSSLALLSSKRGRAY------ARTRADEAFALP 520
+ LGG++ A DIE + A+ +IR G+ +LA+LSS R + A E A P
Sbjct: 196 DLLGGVVAA--DIENMPAVLEHIRSGNLRALAILSSDRSTHFPAVPTMAELGYPEFVASP 253

Query: 521 NFSDAIPVST----IELQQRPANNTARSEPPVE 607
F+ P T I L R N +S+ VE
Sbjct: 254 WFAVMAPKGTDPKIIVLLNRHINEALQSKAVVE 286


>sp|Q18E67|RPIA_HALWD Ribose-5-phosphate isomerase A
OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpiA PE=3
SV=1
Length = 236

Score = 30.8 bits (68), Expect = 6.7
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Frame = +2

Query: 395 IEQVKAMEINIRGGDK--SSLALLSSKRGRAYARTR------------ADEAFALPNFSD 532
IE V +++ I G D+ ++L L+ G A+AR + ADE+ + S+
Sbjct: 76 IEAVDHIDVAIDGSDEINNNLTLIKGG-GAAHAREKVIDATADQFIVVADESKLVETLSE 134

Query: 533 AIPVSTIELQQRPANN 580
+PVST+ + Q+P +
Sbjct: 135 PVPVSTLPMAQKPVKH 150


tr_hit_id Q9FN46
Definition tr|Q9FN46|Q9FN46_ARATH Genomic DNA, chromosome 5, P1 clone:MYJ24 (TOUGH) OS=Arabidopsis thaliana
Align length 58
Score (bit) 33.9
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959608|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_C16, 5'
(663 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9FN46|Q9FN46_ARATH Genomic DNA, chromosome 5, P1 clone:MYJ24... 34 9.2
tr|Q8GXN9|Q8GXN9_ARATH Putative uncharacterized protein At5g2308... 34 9.2
tr|Q5A243|Q5A243_CANAL Putative uncharacterized protein OS=Candi... 34 9.2
tr|Q5A1Z3|Q5A1Z3_CANAL Putative uncharacterized protein OS=Candi... 34 9.2

>tr|Q9FN46|Q9FN46_ARATH Genomic DNA, chromosome 5, P1 clone:MYJ24
(TOUGH) OS=Arabidopsis thaliana PE=2 SV=1
Length = 900

Score = 33.9 bits (76), Expect = 9.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2

Query: 485 ARTRADEAFALPNFSDAIPVSTIELQQRPANNTARSEPPVEHEAENVKQTMLQHESVF 658
AR + D LP+ A + Q P T+ EP VE E ENV++ + ++++F
Sbjct: 637 ARNKMDSLVFLPDTVKAASARQVSESQVPKKETSIEEPEVEVEVENVERPVDLYKAIF 694


>tr|Q8GXN9|Q8GXN9_ARATH Putative uncharacterized protein
At5g23080/MYJ24_7 (Putative uncharacterized protein
At5g23080) OS=Arabidopsis thaliana GN=At5g23080/MYJ24_7
PE=1 SV=1
Length = 930

Score = 33.9 bits (76), Expect = 9.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2

Query: 485 ARTRADEAFALPNFSDAIPVSTIELQQRPANNTARSEPPVEHEAENVKQTMLQHESVF 658
AR + D LP+ A + Q P T+ EP VE E ENV++ + ++++F
Sbjct: 667 ARNKMDSLVFLPDTVKAASARQVSESQVPKKETSIEEPEVEVEVENVERPVDLYKAIF 724


>tr|Q5A243|Q5A243_CANAL Putative uncharacterized protein OS=Candida
albicans GN=CaO19.10369 PE=4 SV=1
Length = 1910

Score = 33.9 bits (76), Expect = 9.2
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Frame = +2

Query: 461 SSKRGRAYARTRADEAFALPNFS-DAIPVSTIELQQRPANNTARSEPPVEHEAENV---- 625
S++RGR R R+ ++ P+FS + PVS+IEL+ RPA+ T RS+ P++ +++
Sbjct: 1824 STRRGR---RLRSQDS--KPSFSLQSSPVSSIELRDRPASRT-RSKSPLKQSMKDILKLE 1877

Query: 626 KQTMLQHE 649
K+ L++E
Sbjct: 1878 KEIKLENE 1885


>tr|Q5A1Z3|Q5A1Z3_CANAL Putative uncharacterized protein OS=Candida
albicans GN=CaO19.2850 PE=4 SV=1
Length = 1918

Score = 33.9 bits (76), Expect = 9.2
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Frame = +2

Query: 461 SSKRGRAYARTRADEAFALPNFS-DAIPVSTIELQQRPANNTARSEPPVEHEAENV---- 625
S++RGR R R+ ++ P+FS + PVS+IEL+ RPA+ T RS+ P++ +++
Sbjct: 1832 STRRGR---RLRSQDS--KPSFSLQSSPVSSIELRDRPASRT-RSKSPLKQSMKDILKLE 1885

Query: 626 KQTMLQHE 649
K+ L++E
Sbjct: 1886 KEIKLENE 1893