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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959617
Clone id TST39A01NGRL0005_D02
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_D02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGAGTCCAGTCTATAAAGAGGCCAAGCAATTAAGATGTCTAGTTGTGGAAATTCAAACT
GTAGCTGCGGCTCTTCGTGCTCGTGTGGAAGTGGCTGCAAATGCGGCAAGAGGACCTCTG
ATATAATGGATGCTTCTATATTCGAGTGCAGCATGCCGAGGACAGAAAGATCGATCATGG
CATGCACTTGGATCACTGCCGGATTCCAGTATTACCTCGATGGGCCTTCTCCTTTTCCAG
CTTAATGAAACACTGCCTTTTCACACCCTTCTACCATTATATTGACCGCCCTCAGCATCG
TCCGACGCCTTGTTACTACGTTAGAATAAGCGCAGATTCAAAAATCTGCCTTCTCAATAA
CCCACGTGGCAACGCTTCGTTTCCTACTTGTACATATATATATATATATATATGCAAATT
GGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959617|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_D02, 5'
         (424 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A7QZ97
Definition tr|A7QZ97|A7QZ97_VITVI Chromosome undetermined scaffold_268, whole genome shotgun sequence OS=Vitis vinifera
Align length 44
Score (bit) 39.7
E-value 0.075
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959617|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_D02, 5'
         (424 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QZ97|A7QZ97_VITVI Chromosome undetermined scaffold_268, who...    40   0.075
tr|B7FLS2|B7FLS2_MEDTR Putative uncharacterized protein OS=Medic...    39   0.17 
tr|A7QZA2|A7QZA2_VITVI Chromosome undetermined scaffold_268, who...    39   0.17 
tr|Q9XH51|Q9XH51_ORYSA CER1 OS=Oryza sativa GN=CER1 PE=2 SV=1          37   0.63 
tr|Q9FWK6|Q9FWK6_ORYSA Putative CER1 OS=Oryza sativa GN=OSJNBa00...    37   0.63 
tr|Q7XPZ4|Q7XPZ4_ORYSJ OSJNBa0004N05.14 protein OS=Oryza sativa ...    37   0.63 
tr|Q7XDI3|Q7XDI3_ORYSJ Os10g0471100 protein OS=Oryza sativa subs...    37   0.63 
tr|Q109K1|Q109K1_ORYSJ CER1 protein, putative, expressed OS=Oryz...    37   0.63 
tr|B8BHF1|B8BHF1_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.63 
tr|B8ARQ6|B8ARQ6_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.63 
tr|B8A2T5|B8A2T5_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.63 
tr|B6TFH3|B6TFH3_MAIZE CER1 OS=Zea mays PE=2 SV=1                      37   0.63 
tr|A6XBA5|A6XBA5_WHEAT TCER1 (Fragment) OS=Triticum aestivum PE=...    37   0.63 
tr|A5BHB6|A5BHB6_VITVI Putative uncharacterized protein OS=Vitis...    37   0.63 
tr|A3C5M9|A3C5M9_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.63 
tr|A3AVI3|A3AVI3_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.63 
tr|Q6K9F6|Q6K9F6_ORYSJ Os02g0621300 protein OS=Oryza sativa subs...    36   0.82 
tr|B8AFI3|B8AFI3_ORYSI Putative uncharacterized protein OS=Oryza...    36   0.82 
tr|A3A960|A3A960_ORYSJ Putative uncharacterized protein OS=Oryza...    36   0.82 
tr|A9RQD0|A9RQD0_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.1  
tr|A7QDP3|A7QDP3_VITVI Chromosome chr15 scaffold_82, whole genom...    36   1.1  
tr|A5AWD7|A5AWD7_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|Q6VZW7|Q6VZW7_CNPV CNPV030 ankyrin repeat protein OS=Canarypo...    35   1.4  
tr|B8BHF0|B8BHF0_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.4  
tr|A7QDP2|A7QDP2_VITVI Chromosome chr15 scaffold_82, whole genom...    34   3.1  
tr|A5C4V6|A5C4V6_VITVI Putative uncharacterized protein OS=Vitis...    34   3.1  
tr|Q6RCI6|Q6RCI6_MAIZE Gl1 protein OS=Zea mays PE=2 SV=1               34   4.1  
tr|Q6RBX9|Q6RBX9_MAIZE Glossy1 protein OS=Zea mays PE=4 SV=1           34   4.1  
tr|B6UE76|B6UE76_MAIZE CER1 OS=Zea mays PE=2 SV=1                      34   4.1  
tr|B5L347|B5L347_WHEAT TCER1 OS=Triticum aestivum PE=2 SV=1            34   4.1  

>tr|A7QZ97|A7QZ97_VITVI Chromosome undetermined scaffold_268, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00010554001 PE=4 SV=1
          Length = 618

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P+W FS    +K+ ++TP +H +   Q R
Sbjct: 213 IDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSLHHTQFR 256


>tr|B7FLS2|B7FLS2_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 385

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   +L HC   ++P+W F     +K+ ++TP +H +   Q R
Sbjct: 213 IDFMNNLGHCNFEIVPKWLFDIFPPLKYLMYTPSFHSLHHTQFR 256


>tr|A7QZA2|A7QZA2_VITVI Chromosome undetermined scaffold_268, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00010560001 PE=4 SV=1
          Length = 256

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRP 292
           ID   ++ HC   ++P+W FS    +K+ ++TP +H    P
Sbjct: 213 IDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSTSHP 253


>tr|Q9XH51|Q9XH51_ORYSA CER1 OS=Oryza sativa GN=CER1 PE=2 SV=1
          Length = 621

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P W F++   +K+ ++TP +H +   Q R
Sbjct: 213 IDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQFR 256


>tr|Q9FWK6|Q9FWK6_ORYSA Putative CER1 OS=Oryza sativa
           GN=OSJNBa0079L16.17 PE=4 SV=1
          Length = 621

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P W F++   +K+ ++TP +H +   Q R
Sbjct: 213 IDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQFR 256


>tr|Q7XPZ4|Q7XPZ4_ORYSJ OSJNBa0004N05.14 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0004N05.14 PE=4 SV=2
          Length = 597

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P+W F     +K+ ++TP +H +   Q R
Sbjct: 213 IDFMNNMGHCNFELMPKWMFQTFPPLKYLIYTPSFHSLHHTQFR 256


>tr|Q7XDI3|Q7XDI3_ORYSJ Os10g0471100 protein OS=Oryza sativa subsp.
           japonica GN=Os10g0471100 PE=4 SV=1
          Length = 621

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P W F++   +K+ ++TP +H +   Q R
Sbjct: 213 IDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQFR 256


>tr|Q109K1|Q109K1_ORYSJ CER1 protein, putative, expressed OS=Oryza
           sativa subsp. japonica GN=LOC_Os10g33250 PE=4 SV=1
          Length = 595

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P W F++   +K+ ++TP +H +   Q R
Sbjct: 187 IDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQFR 230


>tr|B8BHF1|B8BHF1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_33995 PE=4 SV=1
          Length = 621

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P W F++   +K+ ++TP +H +   Q R
Sbjct: 213 IDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQFR 256


>tr|B8ARQ6|B8ARQ6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16615 PE=4 SV=1
          Length = 561

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 170 IDHGMHLDHCRIPVLPRWAFSFSSLMKHCLFTPFYHYIDRPQHR 301
           ID   ++ HC   ++P+W F     +K+ ++TP +H +   Q R
Sbjct: 141 IDFMNNMGHCNFELMPKWMFQTFPPLKYLIYTPSFHSLHHTQFR 184