DK959658 |
Clone id |
TST39A01NGRL0005_E19 |
Library |
TST39 |
Length |
645 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_E19. 5' end sequence. |
Accession |
DK959658 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig12 |
Sequence |
CTCTCTCTCTCTCTCACTCTCTCTCACACACACACACACACACACACACACACACATGGT GATTCGCATCAACCAAGGCAGGAAGGAGTTGAGGGCAGGGTTTCCTGCATTCCCAAGGAG GAGGACAAAAATGAAGCCGTGTGAGCTCGCAGCAGGTAATTCTTTCTTTTATAACCCGCC TCAAAGAGGCGCCCAATATTGCTACCACGATGGCCACCATTTCAGCAAGAAGCCCACCTC CAAAGACAAGAAAAGCAGACTGTGGGAAGAAGACCTCGTGCACATGCGCCATTGCCCGCT TCCGGCATGTTTCCCGAGCTCCGCCGCCATCACTTGGCCGCCCATCACCGACGCAAGCTC GGCGTCCTCGTTACCGCAGTTTCGCGGTTGTTGCTACCATGAGGCACAAGAGGAGGATGA TGATGATAATGACAATGACCATGAGGATTATCTTCCTGAGCTTCAAGGAACCCCAGAGAT GGCCTTGCGTGCGCTGTGATCCTCCTAGGCATGTGGTACTCCTGCAGCTGCTTTGTTGTA TGTACACACACATAGGTCTTCTTGCTGAAAATCATCTTTTTCTTTACACACACACACACA CACACAATGAACTGAACTCCCAATTTATATGTACAAATATTCCGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2ARZ3 |
Definition |
sp|A2ARZ3|YB019_MOUSE Uncharacterized protein FLJ44048 homolog OS=Mus musculus |
Align length |
52 |
Score (bit) |
31.2 |
E-value |
4.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2HYQ4 |
Definition |
tr|Q2HYQ4|Q2HYQ4_HUMAN Autogenous vein graft remodeling associated protein 2 OS=Homo sapiens |
Align length |
57 |
Score (bit) |
37.0 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959658|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_E19, 5' (645 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2HYQ4|Q2HYQ4_HUMAN Autogenous vein graft remodeling associat... 37 1.0 tr|A5DT96|A5DT96_LODEL Putative uncharacterized protein OS=Lodde... 37 1.0 tr|B4NYW8|B4NYW8_DROYA GE20637 OS=Drosophila yakuba GN=GE20637 P... 35 3.0 tr|Q94SG6|Q94SG6_MONAL Cytochrome c oxidase subunit 1 OS=Monopte... 34 6.7 tr|B4MSK1|B4MSK1_DROWI GK19990 OS=Drosophila willistoni GN=GK199... 34 6.7 tr|Q4T0C0|Q4T0C0_TETNG Chromosome undetermined SCAF11249, whole ... 34 8.8 tr|Q2J1Q2|Q2J1Q2_RHOP2 Peptidase C14, caspase catalytic subunit ... 34 8.8 tr|A1VKV7|A1VKV7_POLNA Putative uncharacterized protein OS=Polar... 34 8.8 tr|B1T445|B1T445_9BURK Putative uncharacterized protein OS=Burkh... 34 8.8 tr|B6NMC2|B6NMC2_BRAFL Putative uncharacterized protein OS=Branc... 34 8.8 tr|B6MWA8|B6MWA8_BRAFL Putative uncharacterized protein OS=Branc... 34 8.8 tr|B4KEW6|B4KEW6_DROMO GI12441 OS=Drosophila mojavensis GN=GI124... 34 8.8 tr|A1Z6I3|A1Z6I3_DROME CG14470 OS=Drosophila melanogaster GN=CG1... 34 8.8
>tr|Q2HYQ4|Q2HYQ4_HUMAN Autogenous vein graft remodeling associated protein 2 OS=Homo sapiens GN=AVGR2 PE=2 SV=1 Length = 335
Score = 37.0 bits (84), Expect = 1.0 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = +3
Query: 195 NIATTMATISARSPPPKTRKADCGKKTSCTCAIARFRHVSRAPPPSLGRPSPTQARR 365 N + +A + RS T K + TS + +F H R+PPP GRPSP RR Sbjct: 67 NRKSDLARVGRRSIRHATTKKQ-SQHTSTVNVLQKFYHAGRSPPPRGGRPSPVVPRR 122
>tr|A5DT96|A5DT96_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus GN=LELG_00582 PE=4 SV=1 Length = 1863
Score = 37.0 bits (84), Expect = 1.0 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 8/53 (15%) Frame = +3
Query: 510 HVVLLQLLCCMYTHIGLLAEN--------HLFLYTHTHTHNELNSQFICTNIP 644 H++LL LL Y+ + LL N H +++THTHTH E++S T+ P Sbjct: 76 HLLLLLLLLQHYSSLILLLNNQQLYPISTHTYIHTHTHTHTEVHSTTCPTHRP 128
>tr|B4NYW8|B4NYW8_DROYA GE20637 OS=Drosophila yakuba GN=GE20637 PE=4 SV=1 Length = 1958
Score = 35.4 bits (80), Expect = 3.0 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +3
Query: 120 GGQK*SRVSSQQVILSFITRLKEAPNIATTMATISARSPPPKTRKADCGKKTSCTCAI 293 GG + QQ++++ + L E PN T T++ + P P RK +KT+ T A+ Sbjct: 88 GGDIFPQQRPQQIMMTPESELLETPNKTTLTPTLATKKPKPAKRKPGTKRKTTSTTAV 145
>tr|Q94SG6|Q94SG6_MONAL Cytochrome c oxidase subunit 1 OS=Monopterus albus GN=COI PE=3 SV=1 Length = 518
Score = 34.3 bits (77), Expect = 6.7 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Frame = -3
Query: 235 GLLAEMVAIVVAIL-----GASLRRVIKERITCCELTRLHFCPPPWECRKPCPQLLPALV 71 G L +VA+++ +L A+ R V+ T L LH CPPP+ + PA V Sbjct: 457 GSLISLVAVIMFLLIIWEAFAAKREVLSISHTTTNLEWLHGCPPPYHTFEE-----PAFV 511
Query: 70 DANHH 56 NHH Sbjct: 512 QVNHH 516
>tr|B4MSK1|B4MSK1_DROWI GK19990 OS=Drosophila willistoni GN=GK19990 PE=4 SV=1 Length = 511
Score = 34.3 bits (77), Expect = 6.7 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 17/63 (26%) Frame = +3
Query: 234 PPPKTR--------------KADCGKKTS---CTCAIARFRHVSRAPPPSLGRPSPTQAR 362 PPPK + K DCG K + C+C+ R+VS PSL PSP R Sbjct: 91 PPPKVKPSKLYAKVDRVTVNKPDCGAKRAAGGCSCSSCSSRYVSS---PSLANPSPNAIR 147
Query: 363 RPR 371 R R Sbjct: 148 RRR 150
>tr|Q4T0C0|Q4T0C0_TETNG Chromosome undetermined SCAF11249, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00009417001 PE=4 SV=1 Length = 122
Score = 33.9 bits (76), Expect = 8.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3
Query: 492 RCDPPRHVVL-LQLLCCMYTHIGLLAENHLFLYTHTHTHNELNSQFI 629 +C R +V QL +TH H ++YTHTHTH LN ++ Sbjct: 63 QCQAQRWLVFYFQLKTVSHTHTH--THTHTYIYTHTHTHTILNLNYV 107
>tr|Q2J1Q2|Q2J1Q2_RHOP2 Peptidase C14, caspase catalytic subunit p20 OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_0897 PE=3 SV=1 Length = 541
Score = 33.9 bits (76), Expect = 8.8 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = +3
Query: 174 TRLKEAPNIATTMATISARSPPPKTRKADCGKKTSCTCAIARFRHVSRAPPPSLGRPSPT 353 +R ++ P I++++A A P T +D K + T A A V R PP + P P Sbjct: 232 SRSEQVPWISSSLAEDFAFVPAAATAASDSAPKPAATAAPATSPIVDRTPPEAPAAPKPV 291
Query: 354 QAR 362 +A+ Sbjct: 292 EAK 294
>tr|A1VKV7|A1VKV7_POLNA Putative uncharacterized protein OS=Polaromonas naphthalenivorans (strain CJ2) GN=Pnap_0968 PE=4 SV=1 Length = 110
Score = 33.9 bits (76), Expect = 8.8 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = +2
Query: 233 PTSKDKKSRLWEEDLVHMRHCPLPACFPSSAAITWPPITDASSASSL 373 P K +K+R E L+ HC LPAC + A TWP A+SL Sbjct: 58 PCRKSRKTRK-TEFLIPAAHCVLPACCAAINASTWPASQTVVPAASL 103
>tr|B1T445|B1T445_9BURK Putative uncharacterized protein OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_2561 PE=4 SV=1 Length = 245
Score = 33.9 bits (76), Expect = 8.8 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 13/82 (15%) Frame = +3
Query: 156 VILSFITRLKEAPNIATTMATISARSPPPKTRKAD-------------CGKKTSCTCAIA 296 ++ S + L AP +A R PPP+ R+ + CGK S +C A Sbjct: 164 IVESHVAALDSAPPVA--------RVPPPRRRRRNRAGSAWRGGSPTVCGKLAS-SCPRA 214
Query: 297 RFRHVSRAPPPSLGRPSPTQAR 362 R RH R P + +PSP +R Sbjct: 215 RSRHARRCWPATRCQPSPCVSR 236
>tr|B6NMC2|B6NMC2_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_96838 PE=4 SV=1 Length = 844
Score = 33.9 bits (76), Expect = 8.8 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 10/66 (15%) Frame = +3
Query: 135 SRVSSQQVILSFITRLKEAPNIATTMATISARSPPPK---------TRKADCGKKT-SCT 284 SR+ + +SF + + EAP+ T++ARSPPP T++ + GK+ CT Sbjct: 472 SRMGMGERTISFASNVAEAPS------TLAARSPPPSSYPSRASLLTQQGETGKEPGGCT 525
Query: 285 CAIARF 302 C +A F Sbjct: 526 CFMAGF 531
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