NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959658
Clone id TST39A01NGRL0005_E19
Library
Length 645
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_E19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCTCTCTCTCTCTCACTCTCTCTCACACACACACACACACACACACACACACACATGGT
GATTCGCATCAACCAAGGCAGGAAGGAGTTGAGGGCAGGGTTTCCTGCATTCCCAAGGAG
GAGGACAAAAATGAAGCCGTGTGAGCTCGCAGCAGGTAATTCTTTCTTTTATAACCCGCC
TCAAAGAGGCGCCCAATATTGCTACCACGATGGCCACCATTTCAGCAAGAAGCCCACCTC
CAAAGACAAGAAAAGCAGACTGTGGGAAGAAGACCTCGTGCACATGCGCCATTGCCCGCT
TCCGGCATGTTTCCCGAGCTCCGCCGCCATCACTTGGCCGCCCATCACCGACGCAAGCTC
GGCGTCCTCGTTACCGCAGTTTCGCGGTTGTTGCTACCATGAGGCACAAGAGGAGGATGA
TGATGATAATGACAATGACCATGAGGATTATCTTCCTGAGCTTCAAGGAACCCCAGAGAT
GGCCTTGCGTGCGCTGTGATCCTCCTAGGCATGTGGTACTCCTGCAGCTGCTTTGTTGTA
TGTACACACACATAGGTCTTCTTGCTGAAAATCATCTTTTTCTTTACACACACACACACA
CACACAATGAACTGAACTCCCAATTTATATGTACAAATATTCCGT
■■Homology search results ■■ -
sp_hit_id A2ARZ3
Definition sp|A2ARZ3|YB019_MOUSE Uncharacterized protein FLJ44048 homolog OS=Mus musculus
Align length 52
Score (bit) 31.2
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959658|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_E19, 5'
         (645 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A2ARZ3|YB019_MOUSE Uncharacterized protein FLJ44048 homolog O...    31   4.8  
sp|A2QW93|HSE1_ASPNC Class E vacuolar protein-sorting machinery ...    31   4.9  
sp|Q3Z5W2|KEFC_SHISS Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q83SQ3|KEFC_SHIFL Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q0T8E8|KEFC_SHIF8 Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q326I6|KEFC_SHIBS Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q8ZRW2|KEFC_SALTY Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q8Z9K0|KEFC_SALTI Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|A9MYL9|KEFC_SALPB Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q5PIL3|KEFC_SALPA Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q57TH4|KEFC_SALCH Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|A9MQG6|KEFC_SALAR Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|A7MIA0|KEFC_ENTS8 Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q1RGF1|KEFC_ECOUT Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|P03819|KEFC_ECOLI Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|B1IRC9|KEFC_ECOLC Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q8FLA1|KEFC_ECOL6 Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q0TLU2|KEFC_ECOL5 Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|A7ZVZ9|KEFC_ECOHS Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q8XA20|KEFC_ECO57 Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|A7ZHE0|KEFC_ECO24 Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|A8ALQ4|KEFC_CITK8 Glutathione-regulated potassium-efflux syst...    31   6.3  
sp|Q9CCP1|UVRC_MYCLE UvrABC system protein C OS=Mycobacterium le...    30   8.2  
sp|A6T4I3|KEFC_KLEP7 Glutathione-regulated potassium-efflux syst...    30   8.2  
sp|P87503|DPOL_ADE04 DNA polymerase OS=Human adenovirus E seroty...    30   8.2  

>sp|A2ARZ3|YB019_MOUSE Uncharacterized protein FLJ44048 homolog OS=Mus
            musculus PE=1 SV=2
          Length = 1749

 Score = 31.2 bits (69), Expect = 4.8
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 180  LKEAPNIATT-MATISARSPPPKTRKADCGKKTSCTCAIARFRHVSRAPPPS 332
            L+  PNI +  +A IS ++ P +T + DC K+T C+ A  R   +    P S
Sbjct: 1375 LRIDPNIVSDHLAVISMKTQPLETLQMDCLKRTGCSIAELRRNSIRGIGPSS 1426


>sp|A2QW93|HSE1_ASPNC Class E vacuolar protein-sorting machinery
           protein hse1 OS=Aspergillus niger (strain CBS 513.88 /
           FGSC A1513) GN=hse1 PE=3 SV=1
          Length = 611

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 175 PASKRRPILLPRWPPFQQEAHLQRQEKQTVGRRPRAHAPLPASGMFPE 318
           PAS+R P       P   + H Q+Q++Q   +  + H   PASG  PE
Sbjct: 499 PASQRPPYPGAVQVPAAVQQHFQQQQQQPQQQSQQPHPEYPASGYTPE 546


>sp|Q3Z5W2|KEFC_SHISS Glutathione-regulated potassium-efflux system
           protein kefC OS=Shigella sonnei (strain Ss046) GN=kefC
           PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251


>sp|Q83SQ3|KEFC_SHIFL Glutathione-regulated potassium-efflux system
           protein kefC OS=Shigella flexneri GN=kefC PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251


>sp|Q0T8E8|KEFC_SHIF8 Glutathione-regulated potassium-efflux system
           protein kefC OS=Shigella flexneri serotype 5b (strain
           8401) GN=kefC PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251


>sp|Q326I6|KEFC_SHIBS Glutathione-regulated potassium-efflux system
           protein kefC OS=Shigella boydii serotype 4 (strain
           Sb227) GN=kefC PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251


>sp|Q8ZRW2|KEFC_SALTY Glutathione-regulated potassium-efflux system
           protein kefC OS=Salmonella typhimurium GN=kefC PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251


>sp|Q8Z9K0|KEFC_SALTI Glutathione-regulated potassium-efflux system
           protein kefC OS=Salmonella typhi GN=kefC PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251


>sp|A9MYL9|KEFC_SALPB Glutathione-regulated potassium-efflux system
           protein kefC OS=Salmonella paratyphi B (strain ATCC
           BAA-1250 / SPB7) GN=kefC PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251


>sp|Q5PIL3|KEFC_SALPA Glutathione-regulated potassium-efflux system
           protein kefC OS=Salmonella paratyphi A GN=kefC PE=3 SV=1
          Length = 620

 Score = 30.8 bits (68), Expect = 6.3
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = -3

Query: 316 RETCRKRAMAHVHEVFFPQSAFLVFGGGLLAEMVAIVVAILGASLRRVI 170
           R   R  A + + EVF   + FLVFG GLL E V + +A +GA L  V+
Sbjct: 204 RPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMA-MGAFLAGVL 251
tr_hit_id Q2HYQ4
Definition tr|Q2HYQ4|Q2HYQ4_HUMAN Autogenous vein graft remodeling associated protein 2 OS=Homo sapiens
Align length 57
Score (bit) 37.0
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959658|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_E19, 5'
         (645 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2HYQ4|Q2HYQ4_HUMAN Autogenous vein graft remodeling associat...    37   1.0  
tr|A5DT96|A5DT96_LODEL Putative uncharacterized protein OS=Lodde...    37   1.0  
tr|B4NYW8|B4NYW8_DROYA GE20637 OS=Drosophila yakuba GN=GE20637 P...    35   3.0  
tr|Q94SG6|Q94SG6_MONAL Cytochrome c oxidase subunit 1 OS=Monopte...    34   6.7  
tr|B4MSK1|B4MSK1_DROWI GK19990 OS=Drosophila willistoni GN=GK199...    34   6.7  
tr|Q4T0C0|Q4T0C0_TETNG Chromosome undetermined SCAF11249, whole ...    34   8.8  
tr|Q2J1Q2|Q2J1Q2_RHOP2 Peptidase C14, caspase catalytic subunit ...    34   8.8  
tr|A1VKV7|A1VKV7_POLNA Putative uncharacterized protein OS=Polar...    34   8.8  
tr|B1T445|B1T445_9BURK Putative uncharacterized protein OS=Burkh...    34   8.8  
tr|B6NMC2|B6NMC2_BRAFL Putative uncharacterized protein OS=Branc...    34   8.8  
tr|B6MWA8|B6MWA8_BRAFL Putative uncharacterized protein OS=Branc...    34   8.8  
tr|B4KEW6|B4KEW6_DROMO GI12441 OS=Drosophila mojavensis GN=GI124...    34   8.8  
tr|A1Z6I3|A1Z6I3_DROME CG14470 OS=Drosophila melanogaster GN=CG1...    34   8.8  

>tr|Q2HYQ4|Q2HYQ4_HUMAN Autogenous vein graft remodeling associated
           protein 2 OS=Homo sapiens GN=AVGR2 PE=2 SV=1
          Length = 335

 Score = 37.0 bits (84), Expect = 1.0
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +3

Query: 195 NIATTMATISARSPPPKTRKADCGKKTSCTCAIARFRHVSRAPPPSLGRPSPTQARR 365
           N  + +A +  RS    T K    + TS    + +F H  R+PPP  GRPSP   RR
Sbjct: 67  NRKSDLARVGRRSIRHATTKKQ-SQHTSTVNVLQKFYHAGRSPPPRGGRPSPVVPRR 122


>tr|A5DT96|A5DT96_LODEL Putative uncharacterized protein
           OS=Lodderomyces elongisporus GN=LELG_00582 PE=4 SV=1
          Length = 1863

 Score = 37.0 bits (84), Expect = 1.0
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
 Frame = +3

Query: 510 HVVLLQLLCCMYTHIGLLAEN--------HLFLYTHTHTHNELNSQFICTNIP 644
           H++LL LL   Y+ + LL  N        H +++THTHTH E++S    T+ P
Sbjct: 76  HLLLLLLLLQHYSSLILLLNNQQLYPISTHTYIHTHTHTHTEVHSTTCPTHRP 128


>tr|B4NYW8|B4NYW8_DROYA GE20637 OS=Drosophila yakuba GN=GE20637 PE=4
           SV=1
          Length = 1958

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +3

Query: 120 GGQK*SRVSSQQVILSFITRLKEAPNIATTMATISARSPPPKTRKADCGKKTSCTCAI 293
           GG    +   QQ++++  + L E PN  T   T++ + P P  RK    +KT+ T A+
Sbjct: 88  GGDIFPQQRPQQIMMTPESELLETPNKTTLTPTLATKKPKPAKRKPGTKRKTTSTTAV 145


>tr|Q94SG6|Q94SG6_MONAL Cytochrome c oxidase subunit 1 OS=Monopterus
           albus GN=COI PE=3 SV=1
          Length = 518

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -3

Query: 235 GLLAEMVAIVVAIL-----GASLRRVIKERITCCELTRLHFCPPPWECRKPCPQLLPALV 71
           G L  +VA+++ +L      A+ R V+    T   L  LH CPPP+   +      PA V
Sbjct: 457 GSLISLVAVIMFLLIIWEAFAAKREVLSISHTTTNLEWLHGCPPPYHTFEE-----PAFV 511

Query: 70  DANHH 56
             NHH
Sbjct: 512 QVNHH 516


>tr|B4MSK1|B4MSK1_DROWI GK19990 OS=Drosophila willistoni GN=GK19990
           PE=4 SV=1
          Length = 511

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 17/63 (26%)
 Frame = +3

Query: 234 PPPKTR--------------KADCGKKTS---CTCAIARFRHVSRAPPPSLGRPSPTQAR 362
           PPPK +              K DCG K +   C+C+    R+VS    PSL  PSP   R
Sbjct: 91  PPPKVKPSKLYAKVDRVTVNKPDCGAKRAAGGCSCSSCSSRYVSS---PSLANPSPNAIR 147

Query: 363 RPR 371
           R R
Sbjct: 148 RRR 150


>tr|Q4T0C0|Q4T0C0_TETNG Chromosome undetermined SCAF11249, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00009417001 PE=4 SV=1
          Length = 122

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 492 RCDPPRHVVL-LQLLCCMYTHIGLLAENHLFLYTHTHTHNELNSQFI 629
           +C   R +V   QL    +TH       H ++YTHTHTH  LN  ++
Sbjct: 63  QCQAQRWLVFYFQLKTVSHTHTH--THTHTYIYTHTHTHTILNLNYV 107


>tr|Q2J1Q2|Q2J1Q2_RHOP2 Peptidase C14, caspase catalytic subunit p20
           OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_0897
           PE=3 SV=1
          Length = 541

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 174 TRLKEAPNIATTMATISARSPPPKTRKADCGKKTSCTCAIARFRHVSRAPPPSLGRPSPT 353
           +R ++ P I++++A   A  P   T  +D   K + T A A    V R PP +   P P 
Sbjct: 232 SRSEQVPWISSSLAEDFAFVPAAATAASDSAPKPAATAAPATSPIVDRTPPEAPAAPKPV 291

Query: 354 QAR 362
           +A+
Sbjct: 292 EAK 294


>tr|A1VKV7|A1VKV7_POLNA Putative uncharacterized protein
           OS=Polaromonas naphthalenivorans (strain CJ2)
           GN=Pnap_0968 PE=4 SV=1
          Length = 110

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +2

Query: 233 PTSKDKKSRLWEEDLVHMRHCPLPACFPSSAAITWPPITDASSASSL 373
           P  K +K+R   E L+   HC LPAC  +  A TWP       A+SL
Sbjct: 58  PCRKSRKTRK-TEFLIPAAHCVLPACCAAINASTWPASQTVVPAASL 103


>tr|B1T445|B1T445_9BURK Putative uncharacterized protein
           OS=Burkholderia ambifaria MEX-5 GN=BamMEX5DRAFT_2561
           PE=4 SV=1
          Length = 245

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
 Frame = +3

Query: 156 VILSFITRLKEAPNIATTMATISARSPPPKTRKAD-------------CGKKTSCTCAIA 296
           ++ S +  L  AP +A        R PPP+ R+ +             CGK  S +C  A
Sbjct: 164 IVESHVAALDSAPPVA--------RVPPPRRRRRNRAGSAWRGGSPTVCGKLAS-SCPRA 214

Query: 297 RFRHVSRAPPPSLGRPSPTQAR 362
           R RH  R  P +  +PSP  +R
Sbjct: 215 RSRHARRCWPATRCQPSPCVSR 236


>tr|B6NMC2|B6NMC2_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_96838 PE=4 SV=1
          Length = 844

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
 Frame = +3

Query: 135 SRVSSQQVILSFITRLKEAPNIATTMATISARSPPPK---------TRKADCGKKT-SCT 284
           SR+   +  +SF + + EAP+      T++ARSPPP          T++ + GK+   CT
Sbjct: 472 SRMGMGERTISFASNVAEAPS------TLAARSPPPSSYPSRASLLTQQGETGKEPGGCT 525

Query: 285 CAIARF 302
           C +A F
Sbjct: 526 CFMAGF 531