DK959661 |
Clone id |
TST39A01NGRL0005_E22 |
Library |
TST39 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_E22. 5' end sequence. |
Accession |
DK959661 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL275Contig1 |
Sequence |
CCAAAATGGAACAAGTTCTCACAGGTGAGGGTGACGAGATAAGCTCTACTTGGAACGAGG TTTGTGAGACCTTTGATGAGATGGGTCTCCACGAGAACCTTTTGAGAGGCATTTATGCAT ATGGTTTTGAAAAACCTTCTGCGATTCAGCAAAGGGGAATTGTCCCCTTCGCTAAGGGTT TAGATGTTATTCAGCAGGCACAATCTGGCACTGGCAAGACTGCCACCTTTTGCTCTGGAA TACTTCAGCAGCTAGATTATAACCTGTTTGATTGCCAGGCACTTGTCTTGGCACCTACCC GAGAATTGGCTCAGCAGATAGAGAAGGTGATGCGTGCGCTTGGTGATTATTTGCAAGTGA AGGTACATGCTTGTGTTGGTGGTACAAGTGTAAGAGAAGATATTCGAATTCTTCAGAGTG GAGTCCATGTTGTGGTTGGCACTCCTGGTCGAGTTTATGATATGTTACGTCGTGGTTCAA TGCGACCAGAATACATCAAGATGTTTGTTCTTGATGAGGCTGACGAGATGTTGTCCCGTG GTTTTAAAGATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40471 |
Definition |
sp|Q40471|IF4A9_TOBAC Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum |
Align length |
183 |
Score (bit) |
308.0 |
E-value |
1.0e-83 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRR8 |
Definition |
tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
183 |
Score (bit) |
324.0 |
E-value |
2.0e-87 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959661|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_E22, 5' (552 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea... 324 2e-87 tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella paten... 323 4e-87 tr|A9U6C4|A9U6C4_PHYPA Predicted protein (Fragment) OS=Physcomit... 320 3e-86 tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella paten... 320 3e-86 tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella paten... 318 9e-86 tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella paten... 313 3e-84 tr|A9PD17|A9PD17_POPTR Putative uncharacterized protein OS=Popul... 309 6e-83 tr|Q4U474|Q4U474_PENAM Eukaryotic initiation factor 4A OS=Pennis... 308 9e-83 tr|A9P851|A9P851_POPTR Putative uncharacterized protein OS=Popul... 308 9e-83 tr|A7P6N2|A7P6N2_VITVI Chromosome chr9 scaffold_7, whole genome ... 308 9e-83 tr|A9PA36|A9PA36_POPTR Putative uncharacterized protein OS=Popul... 308 1e-82 tr|Q8H1A5|Q8H1A5_PEA DEAD box RNA helicase OS=Pisum sativum PE=2... 308 2e-82 tr|A7PE49|A7PE49_VITVI Chromosome chr11 scaffold_13, whole genom... 308 2e-82 tr|A5BI23|A5BI23_VITVI Putative uncharacterized protein OS=Vitis... 308 2e-82 tr|A7P4J8|A7P4J8_VITVI Chromosome chr4 scaffold_6, whole genome ... 307 2e-82 tr|Q8H1A4|Q8H1A4_PEA DEAD box RNA helicase OS=Pisum sativum PE=2... 307 3e-82 tr|O24449|O24449_MAIZE Translational initiation factor eIF-4A OS... 307 3e-82 tr|B7EPR0|B7EPR0_ORYSJ cDNA clone:001-114-H08, full insert seque... 306 5e-82 tr|A9PA53|A9PA53_POPTR Putative uncharacterized protein OS=Popul... 306 5e-82 tr|A5BNE8|A5BNE8_VITVI Putative uncharacterized protein OS=Vitis... 306 5e-82 tr|A2YGP5|A2YGP5_ORYSI Putative uncharacterized protein OS=Oryza... 306 5e-82 tr|B1P765|B1P765_LOLTE Eukaryotic initiation factor 4A (Fragment... 306 6e-82 tr|A2Q689|A2Q689_MEDTR Helicase, C-terminal OS=Medicago truncatu... 305 8e-82 tr|A7KMF1|A7KMF1_LOLPR Eukaryotic initiation factor 4A (Fragment... 305 1e-81 tr|O24558|O24558_MAIZE Translation initiation factor OS=Zea mays... 305 1e-81 tr|B7EMF9|B7EMF9_ORYSJ cDNA clone:J033048E24, full insert sequen... 305 1e-81 tr|B4FBK3|B4FBK3_MAIZE Eukaryotic initiation factor 4A OS=Zea ma... 305 1e-81 tr|A3A343|A3A343_ORYSJ Putative uncharacterized protein OS=Oryza... 305 1e-81 tr|A2X0V4|A2X0V4_ORYSI Putative uncharacterized protein OS=Oryza... 305 1e-81 tr|A7KMF2|A7KMF2_LOLPR Eukaryotic initiation factor 4A (Fragment... 303 5e-81
>tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 413
Score = 324 bits (830), Expect = 2e-87 Identities = 160/183 (87%), Positives = 174/183 (95%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KM+++L+ EGDE+ ++++EV E+FDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMKEILSTEGDELFASYDEVHESFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY L DCQALVLAPTRELAQQIEKVMRALGDYLQVK Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYGLLDCQALVLAPTRELAQQIEKVMRALGDYLQVK 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVR+D RIL SGVHVVVGTPGRV+DMLRR S+RP+YIKMFVLDEADEMLSRG Sbjct: 139 VHACVGGTSVRDDQRILMSGVHVVVGTPGRVFDMLRRHSLRPDYIKMFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
>tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226898 PE=3 SV=1 Length = 413
Score = 323 bits (828), Expect = 4e-87 Identities = 161/183 (87%), Positives = 169/183 (92%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KME +L+GEGD+ STW EV ETFD MGLHENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMENILSGEGDDFISTWEEVHETFDVMGLHENLLRGIYAYGFEKPSAIQQRGIVPFTKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMRALGDYLQVK Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRALGDYLQVK 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R + IK FVLDEADEMLSRG Sbjct: 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
>tr|A9U6C4|A9U6C4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228441 PE=4 SV=1 Length = 203
Score = 320 bits (820), Expect = 3e-86 Identities = 160/183 (87%), Positives = 168/183 (91%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KME +L GEG++ STW EV ETFD MGLHENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMETILGGEGEDFISTWEEVHETFDVMGLHENLLRGIYAYGFEKPSAIQQRGIVPFTKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMRALGDYLQVK Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRALGDYLQVK 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R + IK FVLDEADEMLSRG Sbjct: 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
>tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233331 PE=3 SV=1 Length = 413
Score = 320 bits (820), Expect = 3e-86 Identities = 160/183 (87%), Positives = 168/183 (91%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KME +L GEG++ STW EV ETFD MGLHENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMETILGGEGEDFISTWEEVHETFDVMGLHENLLRGIYAYGFEKPSAIQQRGIVPFTKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMRALGDYLQVK Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRALGDYLQVK 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R + IK FVLDEADEMLSRG Sbjct: 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
>tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107162 PE=3 SV=1 Length = 413
Score = 318 bits (816), Expect = 9e-86 Identities = 160/183 (87%), Positives = 167/183 (91%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KME VL GEG++ STW EV ETFD M LHENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMETVLAGEGEDFISTWEEVHETFDVMDLHENLLRGIYAYGFEKPSAIQQRGIVPFTKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMRALGDYLQVK Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRALGDYLQVK 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R + IK FVLDEADEMLSRG Sbjct: 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADAIKCFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
>tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_119989 PE=3 SV=1 Length = 414
Score = 313 bits (803), Expect = 3e-84 Identities = 158/184 (85%), Positives = 168/184 (91%), Gaps = 1/184 (0%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYG-FEKPSAIQQRGIVPFAKG 179 KME +L+ EG++ STW EV +TFD MGLHENLLRGIYAYG FEKPSAIQQRGIVPF KG Sbjct: 19 KMENILSAEGEDFISTWEEVHDTFDVMGLHENLLRGIYAYGSFEKPSAIQQRGIVPFTKG 78
Query: 180 LDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQV 359 LDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMRALGDYLQV Sbjct: 79 LDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRALGDYLQV 138
Query: 360 KVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSR 539 KVHACVGGTSVRED RILQ+GVHVVVGTPGRVYDMLRR ++R + IK FVLDEADEMLSR Sbjct: 139 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEADEMLSR 198
Query: 540 GFKD 551 GFKD Sbjct: 199 GFKD 202
>tr|A9PD17|A9PD17_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 309 bits (792), Expect = 6e-83 Identities = 154/183 (84%), Positives = 166/183 (90%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KM +L +G + ++++EV +TFD MGL ENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMNDLLANDGQDFFTSYDEVYDTFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY L CQALVLAPTRELAQQIEKVMRALGDYL VK Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVK 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVRED RILQ+GVHVVVGTPGRV+DMLRR S+RP+YIKMFVLDEADEMLSRG Sbjct: 139 VHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
>tr|Q4U474|Q4U474_PENAM Eukaryotic initiation factor 4A OS=Pennisetum americanum GN=eIF4A PE=2 SV=1 Length = 414
Score = 308 bits (790), Expect = 9e-83 Identities = 156/184 (84%), Positives = 171/184 (92%), Gaps = 1/184 (0%) Frame = +3
Query: 3 KMEQVL-TGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKG 179 KM+++L TGE +E ++++EV E+FD+MGL ENLLRGIYAYGFEKPSAIQQRGIVPF KG Sbjct: 19 KMQELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG 78
Query: 180 LDVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQV 359 LDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTRELAQQIEKVMRALGDYL V Sbjct: 79 LDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGV 138
Query: 360 KVHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSR 539 KVHACVGGTSVRED RIL SGVHVVVGTPGRV+DMLRR S+RP++IKMFVLDEADEMLSR Sbjct: 139 KVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSR 198
Query: 540 GFKD 551 GFKD Sbjct: 199 GFKD 202
>tr|A9P851|A9P851_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 308 bits (790), Expect = 9e-83 Identities = 153/183 (83%), Positives = 169/183 (92%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KM ++LT +G + ++++EV +TFD MGL ENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMNELLTTDGQDFFTSYDEVYDTFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY++ +CQALVLAPTRELAQQIEKVMRALGDYL VK Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYDVVECQALVLAPTRELAQQIEKVMRALGDYLGVK 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVRED RIL +GVHVVVGTPGRV+DMLRR S+RP+YIKMFVLDEADEMLSRG Sbjct: 139 VHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
>tr|A7P6N2|A7P6N2_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034135001 PE=3 SV=1 Length = 413
Score = 308 bits (790), Expect = 9e-83 Identities = 153/183 (83%), Positives = 169/183 (92%) Frame = +3
Query: 3 KMEQVLTGEGDEISSTWNEVCETFDEMGLHENLLRGIYAYGFEKPSAIQQRGIVPFAKGL 182 KM +L+ +G++ ++++EV +TFD MGL ENLLRGIYAYGFEKPSAIQQRGIVPF KGL Sbjct: 19 KMNDLLSADGEDFFTSYDEVYDTFDSMGLVENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 78
Query: 183 DVIQQAQSGTGKTATFCSGILQQLDYNLFDCQALVLAPTRELAQQIEKVMRALGDYLQVK 362 DVIQQAQSGTGKTATFCSGILQQLDY+L CQALVLAPTRELAQQIEKVMRALGDYL V+ Sbjct: 79 DVIQQAQSGTGKTATFCSGILQQLDYSLVQCQALVLAPTRELAQQIEKVMRALGDYLGVR 138
Query: 363 VHACVGGTSVREDIRILQSGVHVVVGTPGRVYDMLRRGSMRPEYIKMFVLDEADEMLSRG 542 VHACVGGTSVRED RILQ+GVHVVVGTPGRV+DMLRR S+RP+YIKMFVLDEADEMLSRG Sbjct: 139 VHACVGGTSVREDQRILQTGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRG 198
Query: 543 FKD 551 FKD Sbjct: 199 FKD 201
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