DK959680 |
Clone id |
TST39A01NGRL0005_F17 |
Library |
TST39 |
Length |
620 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_F17. 5' end sequence. |
Accession |
DK959680 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1Contig8 |
Sequence |
CGAACATCGCTCTACTCGTAAAGACGCCCATCAGCCACGACCCATCACCAGCTAGGACGC TTCACAACCAAGGGCACCCGCGGAGGCTCTTTGCACGCCACGAAGATCTTTGGCATCGAA CCGGACCTCCCCGAGATTGATGACGATCTAGACTACGACACAAGAACAGCAGGAGAGGGC GAGGAGGATTTTTTCCCCTATGGCATTGCAGATGGACACCATATGTACCATGGAGAAGAT GCAAACATTAATGTATTGGAAGCTTTTAAAGAGCCATTCATTGAAGCTGGCGGACCTACT GGCTTTCAAGCTTACTTAGGATGGGGATCTTTGCCCGTTTTTTACTTGATGGTTTGGTAC GGTGTCCAGGTGGAATACATCTTTCTTGCAGCAGTTCTATTTATTTTTGCATTTATCGGA ATAGAGATGGACAAGCCAGACCTCGATCACGAGTTTCCGCCTGAGATCTACATGGAGCGT AGGAAGAAAAGGCTGCAAGAACAGCAAGCAAGCGAAACCAGTCTGCAAGAGCAAGAAGCA AGCAAAATCTCTCTTTACTAAAGATACGTTTGTATAANATGTATGTGTAGCTTCTTGTTG AGTACTTAGTGTGGTGGTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2PC93 |
Definition |
sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus |
Align length |
20 |
Score (bit) |
30.8 |
E-value |
5.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5JK31 |
Definition |
tr|Q5JK31|Q5JK31_ORYSJ cDNA clone:006-207-H04, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
110 |
Score (bit) |
70.9 |
E-value |
6.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959680|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_F17, 5' (620 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5JK31|Q5JK31_ORYSJ cDNA clone:006-207-H04, full insert seque... 71 6e-11 tr|Q5JK30|Q5JK30_ORYSJ Putative uncharacterized protein OSJNBa00... 71 6e-11 tr|Q0JGD3|Q0JGD3_ORYSJ Os01g0929100 protein (Fragment) OS=Oryza ... 71 6e-11 tr|B8A8R7|B8A8R7_ORYSI Putative uncharacterized protein OS=Oryza... 71 6e-11 tr|A7NWZ1|A7NWZ1_VITVI Chromosome chr5 scaffold_2, whole genome ... 69 3e-10 tr|A5AI11|A5AI11_VITVI Putative uncharacterized protein OS=Vitis... 68 4e-10 tr|B4G054|B4G054_MAIZE Putative uncharacterized protein OS=Zea m... 67 8e-10 tr|B7FLH5|B7FLH5_MEDTR Putative uncharacterized protein OS=Medic... 62 2e-08 tr|A9TI07|A9TI07_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07 tr|Q9FG89|Q9FG89_ARATH Genomic DNA, chromosome 5, P1 clone:MQD19... 48 4e-04 tr|Q8LE15|Q8LE15_ARATH Putative uncharacterized protein OS=Arabi... 48 4e-04 tr|A3A165|A3A165_ORYSJ Putative uncharacterized protein OS=Oryza... 35 3.6 tr|Q16TK0|Q16TK0_AEDAE Filamin, putative (Fragment) OS=Aedes aeg... 35 3.6 tr|Q16FY6|Q16FY6_AEDAE Filamin, putative OS=Aedes aegypti GN=AAE... 35 3.6
>tr|Q5JK31|Q5JK31_ORYSJ cDNA clone:006-207-H04, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0052O12.18-1 PE=2 SV=1 Length = 233
Score = 70.9 bits (172), Expect = 6e-11 Identities = 42/110 (38%), Positives = 49/110 (44%) Frame = +1
Query: 163 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 342 RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P Sbjct: 88 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 146
Query: 343 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 492 L + + V EY EMDKPD H F PEIYM R R Sbjct: 147 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 196
>tr|Q5JK30|Q5JK30_ORYSJ Putative uncharacterized protein OSJNBa0052O12.18-2 OS=Oryza sativa subsp. japonica GN=OSJNBa0052O12.18-2 PE=4 SV=1 Length = 177
Score = 70.9 bits (172), Expect = 6e-11 Identities = 42/110 (38%), Positives = 49/110 (44%) Frame = +1
Query: 163 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 342 RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P Sbjct: 32 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 90
Query: 343 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 492 L + + V EY EMDKPD H F PEIYM R R Sbjct: 91 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 140
>tr|Q0JGD3|Q0JGD3_ORYSJ Os01g0929100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0929100 PE=4 SV=1 Length = 176
Score = 70.9 bits (172), Expect = 6e-11 Identities = 42/110 (38%), Positives = 49/110 (44%) Frame = +1
Query: 163 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 342 RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P Sbjct: 31 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 89
Query: 343 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 492 L + + V EY EMDKPD H F PEIYM R R Sbjct: 90 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 139
>tr|B8A8R7|B8A8R7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05039 PE=4 SV=1 Length = 749
Score = 70.9 bits (172), Expect = 6e-11 Identities = 42/110 (38%), Positives = 49/110 (44%) Frame = +1
Query: 163 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 342 RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P Sbjct: 604 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 662
Query: 343 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 492 L + + V EY EMDKPD H F PEIYM R R Sbjct: 663 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 712
>tr|A7NWZ1|A7NWZ1_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020113001 PE=4 SV=1 Length = 218
Score = 68.6 bits (166), Expect = 3e-10 Identities = 40/106 (37%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Frame = +1
Query: 166 TAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFY 345 T G EDF YG DGHH Y D A E + PTGFQ ++ W LP Sbjct: 76 TNGISSEDF-KYGYYDGHHTYFEGDDKGTFWGAIAEDYAAVEPPTGFQGFISWAFLPAIA 134
Query: 346 LMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY-MER 480 +++ V EY EMDKPD H F P+IY MER Sbjct: 135 AGMYFNVPGEYLYIGAALFAAVFCIIEMDKPDKPHNFEPQIYNMER 180
>tr|A5AI11|A5AI11_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032729 PE=4 SV=1 Length = 223
Score = 68.2 bits (165), Expect = 4e-10 Identities = 40/106 (37%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Frame = +1
Query: 166 TAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFY 345 T G EDF YG DGHH Y D A E + PTGFQ ++ W LP Sbjct: 76 TNGISPEDF-KYGYYDGHHTYFEGDDKGTFWGAIAEDYAAVEPPTGFQGFISWAFLPAIA 134
Query: 346 LMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY-MER 480 +++ V EY EMDKPD H F P+IY MER Sbjct: 135 AGMYFNVPGEYLYIGAALFAAVFCIIEMDKPDKPHNFEPQIYNMER 180
>tr|B4G054|B4G054_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 229
Score = 67.0 bits (162), Expect = 8e-10 Identities = 42/110 (38%), Positives = 46/110 (41%) Frame = +1
Query: 163 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 342 RT G EDF YG DGHH Y E E + EA P GFQA + W P Sbjct: 84 RTNGISPEDF-EYGKYDGHHTYFEGQDKKGFWEDVSEWYQEAEPPQGFQALISWAFPPAI 142
Query: 343 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 492 L + + V EY EM KPD H F PEIYM R R Sbjct: 143 ILGMAFNVPGEYLYIGAAVFIVVFCVIEMGKPDKPHNFEPEIYMMERSAR 192
>tr|B7FLH5|B7FLH5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 212
Score = 62.4 bits (150), Expect = 2e-08 Identities = 42/108 (38%), Positives = 51/108 (47%), Gaps = 2/108 (1%) Frame = +1
Query: 163 RTAGEGEEDFFPYGIADGHHMYH-GEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPV 339 RT G E+F YGI DGHH ++ GE+ V A + I G PTGFQ + P Sbjct: 68 RTNGIPPEEF-EYGIFDGHHTFNEGEEKEGTVWGAIMDDVIAVGPPTGFQGLISRLFPPA 126
Query: 340 FYLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY-MER 480 V++ V EY EMDKPD H F P+IY MER Sbjct: 127 IAAGVFFDVPGEYLFIGAGIFTIVFCIIEMDKPDQPHHFEPQIYNMER 174
>tr|A9TI07|A9TI07_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170186 PE=4 SV=1 Length = 217
Score = 58.9 bits (141), Expect = 2e-07 Identities = 35/97 (36%), Positives = 44/97 (45%), Gaps = 1/97 (1%) Frame = +1
Query: 184 EDFFPYGIADGHHMYH-GEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFYLMVWY 360 ED FP+G ADG H +H G+D + KE F +GGP G Q + W +P V + Sbjct: 119 EDLFPFGKADGAHTWHEGDDGTW--WDGIKEVFETSGGPVGAQGAISWLFVPGLIAGVVF 176
Query: 361 GVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY 471 V EY EM KPD F PE+Y Sbjct: 177 NVDQEYLFLYTALFIFAFIGMEMAKPDKPSHFEPEMY 213
>tr|Q9FG89|Q9FG89_ARATH Genomic DNA, chromosome 5, P1 clone:MQD19 (Putative uncharacterized protein At5g43750) OS=Arabidopsis thaliana GN=At5g43750 PE=2 SV=1 Length = 212
Score = 48.1 bits (113), Expect = 4e-04 Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 1/105 (0%) Frame = +1
Query: 181 EEDFFPYGIADGHHMYH-GEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFYLMVW 357 E + F YG DG H Y+ GE A + GFQ + LP L ++ Sbjct: 73 EMEDFKYGYYDGAHTYYEGEVQKGTFWGAIADDIAAVDQTNGFQGLISCMFLPAIALGMY 132
Query: 358 YGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 492 + EY EMDKPD H F P+IY R R Sbjct: 133 FDAPGEYLFIGAALFTVVFCIIEMDKPDQPHNFEPQIYKLERGAR 177
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