DK959700 |
Clone id |
TST39A01NGRL0005_G14 |
Library |
TST39 |
Length |
680 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_G14. 5' end sequence. |
Accession |
DK959700 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2211Contig1 |
Sequence |
TTGTGCGGGAGTTTGCGGATGCTTCTGTGGCCGAGAAGGTTATTAATGAGAAGCATAGTC TTGATGGGCGTACGGTTGAAGTCAAGAAAGCTGTCCGCAGGGAAGAGCATCAGAGTCATC CCAGAAGTGGCACCAGTGGAAGCAGTTCTCCATATGGAAATCCTCCCAGAACGAAGAAAA TATTTGTTGGTGGACTAGCTTCATCAGTTACCGAAGAGGACTTTAAAAGCTATTTTGAAC AATTTGGCACCATTACAGATGCAGTTGTTATGTACGACCACAGTACTCAACGGCCGCGGG GTTTTGGATTTATCACTTTTGATTCTGAAGATGCGGTAGAGAGAGCAGTGCAGAAGAGCT TCCTTGAGTTGCATGACAAGACAGTTGAACTCCCACAAAGCCGTGCCAAAAGAAGTTTCT GCCAAGAATGGACCTGGACGAGGTGCACCATTTGGTCAGTCAAACACAGCAAGTCCTGCC CCTGGCTATGGGGCTCCTCCTTACCTACCATCTCCTGCTGGTGGAAGAGGAGGCTTTCCA CCTTATGGGCCTCCCTTGTATGGAACACCTGGCTATGGACCTCCNGGAATGGGCTATGGT GTTGCCATGAATGGGGGTTTTGGAGGGCCTTCGTACCCTGGGGGACCAGGCTATCCAGGA GGGTATGCTGTTGGGTATGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O94432 |
Definition |
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe |
Align length |
135 |
Score (bit) |
103.0 |
E-value |
1.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959700|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_G14, 5' (680 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15... 103 1e-21 sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M... 102 2e-21 sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H... 102 2e-21 sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=H... 101 3e-21 sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rat... 101 4e-21 sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=M... 101 4e-21 sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ... 96 1e-19 sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 89 2e-17 sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 88 4e-17 sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 87 6e-17 sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27... 85 4e-16 sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B... 79 3e-14 sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 ... 78 5e-14 sp|Q22037|ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 ... 76 2e-13 sp|A5A6H4|ROA1_PANTR Heterogeneous nuclear ribonucleoprotein A1 ... 75 2e-13 sp|P49312|ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 ... 75 2e-13 sp|P09651|ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 ... 75 2e-13 sp|P09867|ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 ... 75 2e-13 sp|P0C7M2|RA1L3_HUMAN Putative heterogeneous nuclear ribonucleop... 75 2e-13 sp|O88569|ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2... 75 3e-13 sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2... 75 3e-13 sp|Q2HJ60|ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2... 75 3e-13 sp|P04256|ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 OS... 75 3e-13 sp|P48810|RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87... 74 7e-13 sp|Q5RBU8|ROA2_PONAB Heterogeneous nuclear ribonucleoproteins A2... 74 9e-13 sp|Q28521|ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 ... 74 9e-13 sp|Q32P51|ROA1L_HUMAN Heterogeneous nuclear ribonucleoprotein A1... 74 9e-13 sp|Q6URK4|ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 OS... 73 1e-12 sp|Q8BG05|ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 ... 73 1e-12 sp|P51991|ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 ... 73 1e-12
>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1 Length = 474
Score = 103 bits (256), Expect = 1e-21 Identities = 48/135 (35%), Positives = 81/135 (60%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 F + +V++++H LDG+ ++ K+A+ REE + +T K+FVG Sbjct: 211 FKNPKCVNEVMSKEHHLDGKIIDPKRAIPREEQE------------------KTAKMFVG 252
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 G+ TEE+F+++F QFG + DA +M D T RPRGFGF+T+++E AVE + + ++ + Sbjct: 253 GVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITI 312
Query: 372 HDKTVELPQSRAKRS 416 H K VE+ ++ K S Sbjct: 313 HGKPVEVKRATPKAS 327
Score = 62.0 bits (149), Expect = 3e-09 Identities = 27/60 (45%), Positives = 37/60 (61%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GGL T++ + YFEQFG + D VM D +T R RGFGF+TF + V + K Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1 Length = 346
Score = 102 bits (253), Expect = 2e-21 Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Frame = +3
Query: 12 FADASVAEKVINEKH-SLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFV 188 FAD + +KV+ + H LD +T++ K A R RTKKIFV Sbjct: 69 FADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFV 114
Query: 189 GGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLE 368 GGL+++ ED K YFEQFG + DA++M+D +T R RGFGF+TF++ED VE+ + F E Sbjct: 115 GGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHE 174
Query: 369 LHDKTVELPQSRAK 410 +++K VE +++ K Sbjct: 175 INNKMVECKKAQPK 188
Score = 62.8 bits (151), Expect = 2e-09 Identities = 27/71 (38%), Positives = 46/71 (64%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GGL+ + + + YF +FG I + +VM D +T+R RGFGF+TF +V++ + + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 357 SFLELHDKTVE 389 EL KT++ Sbjct: 82 PHHELDSKTID 92
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1 Length = 328
Score = 102 bits (253), Expect = 2e-21 Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Frame = +3
Query: 12 FADASVAEKVINEKH-SLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFV 188 FAD + +KV+ + H LD +T++ K A R RTKKIFV Sbjct: 69 FADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFV 114
Query: 189 GGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLE 368 GGL+++ ED K YFEQFG + DA++M+D +T R RGFGF+TF++ED VE+ + F E Sbjct: 115 GGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHE 174
Query: 369 LHDKTVELPQSRAK 410 +++K VE +++ K Sbjct: 175 INNKMVECKKAQPK 188
Score = 62.8 bits (151), Expect = 2e-09 Identities = 27/71 (38%), Positives = 46/71 (64%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GGL+ + + + YF +FG I + +VM D +T+R RGFGF+TF +V++ + + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 357 SFLELHDKTVE 389 EL KT++ Sbjct: 82 PHHELDSKTID 92
>sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1 Length = 362
Score = 101 bits (252), Expect = 3e-21 Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Frame = +3
Query: 12 FADASVAEKVINE-KHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFV 188 F D + +KV+ + +H LD +T++ K A R RTKKIFV Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFV 113
Query: 189 GGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLE 368 GGL+ + T ED K YFEQFG + DA++M+D +T R RGFGF+TF+SED VE+ + F E Sbjct: 114 GGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHE 173
Query: 369 LHDKTVELPQSRAK 410 +++K VE +++ K Sbjct: 174 INNKMVECKKAQPK 187
Score = 67.4 bits (163), Expect = 7e-11 Identities = 30/71 (42%), Positives = 47/71 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GGL+ T+E + YF QFG + + +VM D T+R RGFGF+TF + V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 357 SFLELHDKTVE 389 S EL KT++ Sbjct: 81 SRHELDSKTID 91
>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1 Length = 362
Score = 101 bits (251), Expect = 4e-21 Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Frame = +3
Query: 12 FADASVAEKVINE-KHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFV 188 F D + +KV+ + +H LD +T++ K A R RTKKIFV Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFV 113
Query: 189 GGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLE 368 GGL+ + T ED K YFEQFG + DA++M+D +T R RGFGF+TF+SED VE+ + F E Sbjct: 114 GGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHE 173
Query: 369 LHDKTVELPQSRAK 410 +++K VE +++ K Sbjct: 174 INNKMVECKKAQPK 187
Score = 67.4 bits (163), Expect = 7e-11 Identities = 30/71 (42%), Positives = 47/71 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GGL+ T+E + YF QFG + + +VM D T+R RGFGF+TF + V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 357 SFLELHDKTVE 389 S EL KT++ Sbjct: 81 SRHELDSKTID 91
>sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=Mus musculus GN=Msi1 PE=1 SV=1 Length = 362
Score = 101 bits (251), Expect = 4e-21 Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Frame = +3
Query: 12 FADASVAEKVINE-KHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFV 188 F D + +KV+ + +H LD +T++ K A R RTKKIFV Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT--------------RTKKIFV 113
Query: 189 GGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLE 368 GGL+ + T ED K YFEQFG + DA++M+D +T R RGFGF+TF+SED VE+ + F E Sbjct: 114 GGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHE 173
Query: 369 LHDKTVELPQSRAK 410 +++K VE +++ K Sbjct: 174 INNKMVECKKAQPK 187
Score = 67.4 bits (163), Expect = 7e-11 Identities = 30/71 (42%), Positives = 47/71 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GGL+ T+E + YF QFG + + +VM D T+R RGFGF+TF + V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 357 SFLELHDKTVE 389 S EL KT++ Sbjct: 81 SRHELDSKTID 91
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1 Length = 534
Score = 96.3 bits (238), Expect = 1e-19 Identities = 46/133 (34%), Positives = 76/133 (57%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 F S ++V+ +H LDG+ ++ K+A+ R+E +T KIFVG Sbjct: 207 FEKPSSVDEVVKTQHILDGKVIDPKRAIPRDEQD------------------KTGKIFVG 248
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 G+ V ++F+ +F Q+GTI DA +M D T + RGFGF+T+DS DAV+R Q F++ Sbjct: 249 GIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDF 308
Query: 372 HDKTVELPQSRAK 410 D+ +E+ ++ + Sbjct: 309 KDRKIEIKRAEPR 321
Score = 61.2 bits (147), Expect = 5e-09 Identities = 25/59 (42%), Positives = 41/59 (69%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQ 353 K+F+GGL TE++ + YF ++GT+TD +M D +T R RGFGF++F+ +V+ V+ Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2 Length = 406
Score = 89.0 bits (219), Expect = 2e-17 Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 1/167 (0%) Frame = +3
Query: 9 EFADASVAEKVINEK-HSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIF 185 +F D + V+ + H+LDGR ++ K R ++ KIF Sbjct: 57 KFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIF 116
Query: 186 VGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFL 365 VGG+ + E + + YF++FG +T+ V++YD QRPRGFGFITF+ E +V++AV F Sbjct: 117 VGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFH 176
Query: 366 ELHDKTVELPQSRAKRSFCQEWTWTRCTIWSVKHSKSCPWLWGSSLP 506 ++ K VE+ ++ + S Q + W + + S W P Sbjct: 177 DIMGKKVEVKRAEPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPP 223
Score = 60.5 bits (145), Expect = 8e-09 Identities = 26/54 (48%), Positives = 36/54 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAV 338 K+FVGGL S T+E +SYF Q+G + D V+M D +T + RGFGF+ F + V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1 Length = 407
Score = 88.2 bits (217), Expect = 4e-17 Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Frame = +3
Query: 9 EFADASVAEKVINEK-HSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIF 185 +F D + V+ + H+LDGR ++ K R ++ KIF Sbjct: 57 KFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIF 116
Query: 186 VGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFL 365 VGG+ + E + + YF++FG +T+ V++YD QRPRGFGFITF+ E +V++AV F Sbjct: 117 VGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFH 176
Query: 366 ELHDKTVELPQSRAKRSFCQ 425 ++ K VE+ ++ + S Q Sbjct: 177 DIMGKKVEVKRAEPRDSKSQ 196
Score = 60.5 bits (145), Expect = 8e-09 Identities = 26/54 (48%), Positives = 36/54 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAV 338 K+FVGGL S T+E +SYF Q+G + D V+M D +T + RGFGF+ F + V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1 Length = 360
Score = 87.4 bits (215), Expect = 6e-17 Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 2/141 (1%) Frame = +3
Query: 9 EFADASVAEKVINEK-HSLDGRTVEVKKAVRRE-EHQXXXXXXXXXXXXXXXXXXRTKKI 182 +F D + V+ + H+LDGR ++ K R + + R+ KI Sbjct: 57 KFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKI 116
Query: 183 FVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSF 362 FVGG+ + E + K YF +FG +T+ V++YD QRPRGFGFITF+ E +V++AV F Sbjct: 117 FVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHF 176
Query: 363 LELHDKTVELPQSRAKRSFCQ 425 ++ K VE+ ++ + S Q Sbjct: 177 HDIMGKKVEVKRAEPRDSKSQ 197
Score = 60.5 bits (145), Expect = 8e-09 Identities = 26/54 (48%), Positives = 36/54 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAV 338 K+FVGGL S T+E +SYF Q+G + D V+M D +T + RGFGF+ F + V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LME7 |
Definition |
tr|B8LME7|B8LME7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
133 |
Score (bit) |
158.0 |
E-value |
3.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959700|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_G14, 5' (680 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LME7|B8LME7_PICSI Putative uncharacterized protein OS=Picea... 158 3e-37 tr|Q9SFD3|Q9SFD3_ARATH Putative RNA-binding protein OS=Arabidops... 153 1e-35 tr|Q94A00|Q94A00_ARATH Putative RNA-binding protein OS=Arabidops... 153 1e-35 tr|Q8W555|Q8W555_ARATH AT3g07810/F17A17_15 (Putative RNA-binding... 153 1e-35 tr|Q2R0P4|Q2R0P4_ORYSJ Os11g0637700 protein OS=Oryza sativa subs... 152 1e-35 tr|B6TAS3|B6TAS3_MAIZE RNA-binding protein OS=Zea mays PE=2 SV=1 152 1e-35 tr|B4FK28|B4FK28_MAIZE Putative uncharacterized protein OS=Zea m... 152 1e-35 tr|A7P0F4|A7P0F4_VITVI Chromosome chr19 scaffold_4, whole genome... 152 2e-35 tr|A5C205|A5C205_VITVI Putative uncharacterized protein OS=Vitis... 152 2e-35 tr|Q9FJ56|Q9FJ56_ARATH RNA-binding protein-like OS=Arabidopsis t... 151 3e-35 tr|Q949Z3|Q949Z3_ARATH Putative RNA-binding protein OS=Arabidops... 151 3e-35 tr|Q8L779|Q8L779_ARATH RNA-binding protein-like OS=Arabidopsis t... 151 3e-35 tr|A7R1X0|A7R1X0_VITVI Chromosome undetermined scaffold_383, who... 151 3e-35 tr|Q1ENZ5|Q1ENZ5_MUSAC RNA-binding protein, putative OS=Musa acu... 150 7e-35 tr|A9NVN2|A9NVN2_PICSI Putative uncharacterized protein OS=Picea... 148 4e-34 tr|Q9SU99|Q9SU99_ARATH HnRNP-like protein OS=Arabidopsis thalian... 147 6e-34 tr|Q8W569|Q8W569_ARATH AT4g26650/T15N24_100 OS=Arabidopsis thali... 147 6e-34 tr|A7Q348|A7Q348_VITVI Chromosome chr12 scaffold_47, whole genom... 146 1e-33 tr|Q84ZR9|Q84ZR9_ORYSJ Os07g0584500 protein OS=Oryza sativa subs... 145 2e-33 tr|B8B7U2|B8B7U2_ORYSI Putative uncharacterized protein OS=Oryza... 145 2e-33 tr|B8A134|B8A134_MAIZE Putative uncharacterized protein OS=Zea m... 145 3e-33 tr|A3CD54|A3CD54_ORYSJ Putative uncharacterized protein OS=Oryza... 143 9e-33 tr|Q2A9U7|Q2A9U7_BRAOL RNA recognition motif. (A.k.a. RRM, RBD, ... 140 1e-31 tr|Q9FGJ5|Q9FGJ5_ARATH RNA-binding protein-like OS=Arabidopsis t... 139 1e-31 tr|Q8VZ63|Q8VZ63_ARATH Putative RNA-binding protein OS=Arabidops... 139 1e-31 tr|Q8LDS6|Q8LDS6_ARATH RNA-binding protein-like OS=Arabidopsis t... 139 1e-31 tr|Q2A9U4|Q2A9U4_BRAOL Putative uncharacterized protein OS=Brass... 137 8e-31 tr|Q2A9Q2|Q2A9Q2_BRAOL RNA recognition motif. (A.k.a. RRM, RBD, ... 136 1e-30 tr|A7Q1N3|A7Q1N3_VITVI Chromosome chr7 scaffold_44, whole genome... 136 1e-30 tr|A7NXG9|A7NXG9_VITVI Chromosome chr5 scaffold_2, whole genome ... 136 1e-30
>tr|B8LME7|B8LME7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 432
Score = 158 bits (399), Expect = 3e-37 Identities = 78/133 (58%), Positives = 99/133 (74%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 F++ + ++V+ +KH++DGR VE+K+AV REEHQ RTKKIFVG Sbjct: 54 FSEPTAVDRVLQDKHTIDGRQVELKRAVPREEHQRNAQKSGSNVGAGP----RTKKIFVG 109
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GLA +VTE+DFK YFEQFGTITD VVMYDH +QRPRGFGFITFDSE+AV++ V K+F EL Sbjct: 110 GLAPTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMKNFHEL 169
Query: 372 HDKTVELPQSRAK 410 HDKTVE+ ++ K Sbjct: 170 HDKTVEVKRALPK 182
Score = 62.4 bits (150), Expect = 3e-08 Identities = 27/59 (45%), Positives = 38/59 (64%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQ 353 K+F+GG++ TEE K YF+ +G + + V+M D T R RGFGFI F AV+R +Q Sbjct: 7 KVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDRVLQ 65
>tr|Q9SFD3|Q9SFD3_ARATH Putative RNA-binding protein OS=Arabidopsis thaliana GN=F17A17.15 PE=4 SV=1 Length = 492
Score = 153 bits (386), Expect = 1e-35 Identities = 78/133 (58%), Positives = 95/133 (71%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FAD +VAE VI EKH++DGR VE KKAV R++ RT+KIFVG Sbjct: 54 FADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVG 113
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GL SSVTE DFK+YFEQFGT TD VVMYDH+TQRPRGFGFIT+DSE+AVE+ + K+F EL Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHEL 173
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 174 NGKMVEVKRAVPK 186
Score = 55.5 bits (132), Expect = 3e-06 Identities = 22/48 (45%), Positives = 32/48 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITF 320 K+F+GG++ EE K YF FG + +AV++ D +T R RGFGF+ F Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF 54
>tr|Q94A00|Q94A00_ARATH Putative RNA-binding protein OS=Arabidopsis thaliana GN=At3g07810 PE=2 SV=1 Length = 494
Score = 153 bits (386), Expect = 1e-35 Identities = 78/133 (58%), Positives = 95/133 (71%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FAD +VAE VI EKH++DGR VE KKAV R++ RT+KIFVG Sbjct: 54 FADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPSGPGRTRKIFVG 113
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GL SSVTE DFK+YFEQFGT TD VVMYDH+TQRPRGFGFIT+DSE+AVE+ + K+F EL Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHEL 173
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 174 NGKMVEVKRAVPK 186
Score = 55.5 bits (132), Expect = 3e-06 Identities = 22/48 (45%), Positives = 32/48 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITF 320 K+F+GG++ EE K YF FG + +AV++ D +T R RGFGF+ F Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF 54
>tr|Q8W555|Q8W555_ARATH AT3g07810/F17A17_15 (Putative RNA-binding protein) OS=Arabidopsis thaliana GN=At3g07810 PE=2 SV=1 Length = 494
Score = 153 bits (386), Expect = 1e-35 Identities = 78/133 (58%), Positives = 95/133 (71%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FAD +VAE VI EKH++DGR VE KKAV R++ RT+KIFVG Sbjct: 54 FADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVG 113
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GL SSVTE DFK+YFEQFGT TD VVMYDH+TQRPRGFGFIT+DSE+AVE+ + K+F EL Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHEL 173
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 174 NGKMVEVKRAVPK 186
Score = 55.5 bits (132), Expect = 3e-06 Identities = 22/48 (45%), Positives = 32/48 (66%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITF 320 K+F+GG++ EE K YF FG + +AV++ D +T R RGFGF+ F Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF 54
>tr|Q2R0P4|Q2R0P4_ORYSJ Os11g0637700 protein OS=Oryza sativa subsp. japonica GN=Os11g0637700 PE=2 SV=2 Length = 467
Score = 152 bits (385), Expect = 1e-35 Identities = 80/133 (60%), Positives = 97/133 (72%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FAD +VAE+VI EKH +DGR VE KKAV R++ RTKKIFVG Sbjct: 54 FADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQHALSKSGGSAHGSPGPS--RTKKIFVG 111
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GLAS+VTE DF+ YFEQFGTITD VVMYDH+TQRPRGFGFIT+DSEDAV++A+ K+F EL Sbjct: 112 GLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHEL 171
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 172 NGKMVEVKRAVPK 184
Score = 58.9 bits (141), Expect = 3e-07 Identities = 23/63 (36%), Positives = 39/63 (61%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GG++ E+ + YF+++G + +AV+M D +T R RGFGFI F ER + + Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 357 SFL 365 + Sbjct: 67 KHM 69
>tr|B6TAS3|B6TAS3_MAIZE RNA-binding protein OS=Zea mays PE=2 SV=1 Length = 469
Score = 152 bits (385), Expect = 1e-35 Identities = 79/133 (59%), Positives = 96/133 (72%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FADA+VAE+V EKH +DGR VE KKAV R++H RT+KIFVG Sbjct: 56 FADATVAERVTIEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPG--RTRKIFVG 113
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GL S+VTE DF+ YFEQFG ITD VVMYDH+TQRPRGFGFIT+DSEDAV++A+ KSF EL Sbjct: 114 GLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHEL 173
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 174 NGKMVEVKKAVPK 186
Score = 60.1 bits (144), Expect = 1e-07 Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVER-AVQ 353 K+FVGG++ E+ + YF +FG +T+AV+M D ST R RGFGF+ F ER ++ Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 354 KSFLE 368 K ++ Sbjct: 69 KHMID 73
>tr|B4FK28|B4FK28_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 469
Score = 152 bits (385), Expect = 1e-35 Identities = 79/133 (59%), Positives = 96/133 (72%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FADA+VAE+V EKH +DGR VE KKAV R++H RT+KIFVG Sbjct: 56 FADATVAERVTIEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPG--RTRKIFVG 113
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GL S+VTE DF+ YFEQFG ITD VVMYDH+TQRPRGFGFIT+DSEDAV++A+ KSF EL Sbjct: 114 GLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHEL 173
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 174 NGKMVEVKKAVPK 186
Score = 60.1 bits (144), Expect = 1e-07 Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVER-AVQ 353 K+FVGG++ E+ + YF +FG +T+AV+M D ST R RGFGF+ F ER ++ Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 354 KSFLE 368 K ++ Sbjct: 69 KHMID 73
>tr|A7P0F4|A7P0F4_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027210001 PE=4 SV=1 Length = 436
Score = 152 bits (384), Expect = 2e-35 Identities = 78/133 (58%), Positives = 96/133 (72%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FAD +VAE+V+ +KH +DGRTVE KKAV R++ RTKKIFVG Sbjct: 54 FADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTG-----------RTKKIFVG 102
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GLAS+VTE DFK YF+QFGTI D VVMYDH+TQRPRGFGFIT+DSE+AVER + K+F EL Sbjct: 103 GLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHEL 162
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 163 NGKMVEVKRAVPK 175
Score = 58.9 bits (141), Expect = 3e-07 Identities = 27/71 (38%), Positives = 41/71 (57%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GG++ E+ K YF +G + +AV+M D +T R RGFGF+ F ER V Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 357 SFLELHDKTVE 389 + + +TVE Sbjct: 67 KHM-IDGRTVE 76
>tr|A5C205|A5C205_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003519 PE=4 SV=1 Length = 482
Score = 152 bits (384), Expect = 2e-35 Identities = 78/133 (58%), Positives = 96/133 (72%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXXRTKKIFVG 191 FAD +VAE+V+ +KH +DGRTVE KKAV R++ RTKKIFVG Sbjct: 54 FADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPG--RTKKIFVG 111
Query: 192 GLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFLEL 371 GLAS+VTE DFK YF+QFGTI D VVMYDH+TQRPRGFGFIT+DSE+AVER + K+F EL Sbjct: 112 GLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHEL 171
Query: 372 HDKTVELPQSRAK 410 + K VE+ ++ K Sbjct: 172 NGKMVEVKRAVPK 184
Score = 58.9 bits (141), Expect = 3e-07 Identities = 27/71 (38%), Positives = 41/71 (57%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GG++ E+ K YF +G + +AV+M D +T R RGFGF+ F ER V Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 357 SFLELHDKTVE 389 + + +TVE Sbjct: 67 KHM-IDGRTVE 76
>tr|Q9FJ56|Q9FJ56_ARATH RNA-binding protein-like OS=Arabidopsis thaliana PE=4 SV=1 Length = 473
Score = 151 bits (382), Expect = 3e-35 Identities = 78/135 (57%), Positives = 97/135 (71%), Gaps = 2/135 (1%) Frame = +3
Query: 12 FADASVAEKVINEKHSLDGRTVEVKKAVRREEHQXXXXXXXXXXXXXXXXXX--RTKKIF 185 FAD V+E+VI +KH +DGRTVE KKAV R++ Q RTKKIF Sbjct: 54 FADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIF 113
Query: 186 VGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQKSFL 365 VGGL SS+TEE+FK+YF+QFGTI D VVMYDH+TQRPRGFGFITFDS+DAV+R + K+F Sbjct: 114 VGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFH 173
Query: 366 ELHDKTVELPQSRAK 410 EL+ K VE+ ++ K Sbjct: 174 ELNGKLVEVKRAVPK 188
Score = 58.2 bits (139), Expect = 5e-07 Identities = 27/71 (38%), Positives = 41/71 (57%) Frame = +3
Query: 177 KIFVGGLASSVTEEDFKSYFEQFGTITDAVVMYDHSTQRPRGFGFITFDSEDAVERAVQK 356 K+F+GG++ EE + YF +G + +AV+M D +T R RGFGFI F ER + Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 357 SFLELHDKTVE 389 + + +TVE Sbjct: 67 KHI-IDGRTVE 76
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