DK959708 |
Clone id |
TST39A01NGRL0005_G22 |
Library |
TST39 |
Length |
514 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_G22. 5' end sequence. |
Accession |
DK959708 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
GCTTGCTAAGTGGAGAACTTCCAGCTGGCTGGGTTGATGCCTTACCTAAATACACCCCTG AGTCAGCTGGTGATGCTACCCGCAACCTTTCCCAAGCTTGCCTCAATGCTCTTGTGAAGG TCCTTCCTGGTCTTCTAGGAGGCAGTGCAGATCTGGCTTCCTCAAACATGACTTTACTTA AAATGTTTGGAGACTTTCAGAAAAACACACCAGCAGAGCGCAATCTTAGGTTTGGTGTTA GGGAACATGGTATGGGAGCTATTTGCAATGGCATTGCACTCCATGGAAGTGGACTGATTC CATATTGTGCCACATTCTTTGTGTTCACTGACTACATGCGAGGTGCCATGCGAATTTCTG CTCTTTCTGAGGCCGGAGTGATCTATGTAATGACACATGACTCTATCGGTTTGGGAGAAG ATGGTCCAACCCATCAACCCATAGAGCATCTGGCAAGCTTCAGAGCCATGCCCTATATTT TGATGTTGCGACCTGCTGATGGAAATGAGACTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SIC9 |
Definition |
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays |
Align length |
170 |
Score (bit) |
314.0 |
E-value |
2.0e-85 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959708|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_G22, 5' (514 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 314 2e-85 sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 311 1e-84 sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=... 300 3e-81 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 286 5e-77 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 264 2e-70 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 257 2e-68 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 231 1e-60 sp|P33315|TKT2_YEAST Transketolase 2 OS=Saccharomyces cerevisiae... 181 1e-45 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 181 2e-45 sp|Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyce... 179 9e-45 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 179 9e-45 sp|O94039|TKT1_CANAL Transketolase 1 OS=Candida albicans GN=TKT1... 178 1e-44 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 176 4e-44 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 175 1e-43 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 169 5e-42 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 169 5e-42 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 169 7e-42 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 167 3e-41 sp|O06811|TKT_MYCTU Transketolase OS=Mycobacterium tuberculosis ... 166 6e-41 sp|P59956|TKT_MYCBO Transketolase OS=Mycobacterium bovis GN=tkt ... 166 6e-41 sp|P46708|TKT_MYCLE Transketolase OS=Mycobacterium leprae GN=tkt... 164 2e-40 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 162 6e-40 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 162 6e-40 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 162 6e-40 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 162 6e-40 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 162 6e-40 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 162 6e-40 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 162 8e-40 sp|P21726|TKTP_RALEH Transketolase, plasmid OS=Ralstonia eutroph... 157 2e-38 sp|Q52723|TKT_RHOCA Transketolase OS=Rhodobacter capsulatus GN=t... 157 3e-38
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 314 bits (804), Expect = 2e-85 Identities = 150/170 (88%), Positives = 158/170 (92%) Frame = +3
Query: 3 LLSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLK 182 +++GELP GWVDALPKYTPES GDATRNLSQ CLNAL V+PGL+GGSADLASSNMTLLK Sbjct: 343 IITGELPTGWVDALPKYTPESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLK 402
Query: 183 MFGDFQKNTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISA 362 MFGDFQK+T ERN+RFGVREHGMGAICNGIALH G +PYCATFFVFTDYMRGAMRISA Sbjct: 403 MFGDFQKDTAEERNVRFGVREHGMGAICNGIALHSPGFVPYCATFFVFTDYMRGAMRISA 462
Query: 363 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHL SFRAMP ILMLRPADGNET Sbjct: 463 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNET 512
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 311 bits (797), Expect = 1e-84 Identities = 153/170 (90%), Positives = 156/170 (91%) Frame = +3
Query: 3 LLSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLK 182 +++GELPAGW ALP YTPES DATRNLSQ LNAL KVLPG LGGSADLASSNMTLLK Sbjct: 408 IITGELPAGWEKALPTYTPESPADATRNLSQQNLNALAKVLPGFLGGSADLASSNMTLLK 467
Query: 183 MFGDFQKNTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISA 362 MFGDFQKNTP ERNLRFGVREHGMGAICNGIALH GLIPYCATFFVFTDYMRGAMRISA Sbjct: 468 MFGDFQKNTPEERNLRFGVREHGMGAICNGIALHSLGLIPYCATFFVFTDYMRGAMRISA 527
Query: 363 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMP ILM RPADGNET Sbjct: 528 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNET 577
>sp|Q42676|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1 Length = 519
Score = 300 bits (768), Expect = 3e-81 Identities = 148/170 (87%), Positives = 153/170 (90%) Frame = +3
Query: 3 LLSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLK 182 +++GELP GW ALP YTPE+ GDATRNLSQ LNAL KVLPGLLGGSADLASSNMTLLK Sbjct: 186 IITGELPLGWEKALPTYTPENPGDATRNLSQQNLNALAKVLPGLLGGSADLASSNMTLLK 245
Query: 183 MFGDFQKNTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISA 362 GDFQKNTP ERN+RFGVREHGMGAICNGIALH GLIPYCATFFVFTDYMR AMRISA Sbjct: 246 SSGDFQKNTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAMRISA 305
Query: 363 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 L EA VIYVMTHDSIGLGEDGPTHQPIEHLASFRAMP ILMLRPADGNET Sbjct: 306 LCEARVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNET 355
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 286 bits (731), Expect = 5e-77 Identities = 138/170 (81%), Positives = 147/170 (86%) Frame = +3
Query: 3 LLSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLK 182 + +GE PAGW ALP YTPE+ GDATRNLSQ CLNAL KV+PGLLGGSADLASSNMTLLK Sbjct: 408 ITTGEFPAGWEKALPTYTPETPGDATRNLSQQCLNALAKVIPGLLGGSADLASSNMTLLK 467
Query: 183 MFGDFQKNTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISA 362 MFGDF++ + RFGVREHGMGAICNGI LH G +PYCATFFVFTDYMRGAMRISA Sbjct: 468 MFGDFRRTHRKKETFRFGVREHGMGAICNGICLHSPGFVPYCATFFVFTDYMRGAMRISA 527
Query: 363 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 LSEAGVIYVMTHDSIGLGEDGPTHQPIE L+ F AMP ILMLRPADGNET Sbjct: 528 LSEAGVIYVMTHDSIGLGEDGPTHQPIEALSKFPAMPNILMLRPADGNET 577
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 264 bits (675), Expect = 2e-70 Identities = 124/170 (72%), Positives = 143/170 (84%) Frame = +3
Query: 3 LLSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLK 182 +++GELP GW ALP YTPES G+ TR LS LNA+ VLPGL+GGSADL +SNM LK Sbjct: 345 IITGELPLGWEKALPTYTPESPGNPTRTLSHQNLNAVAAVLPGLIGGSADLTASNMAFLK 404
Query: 183 MFGDFQKNTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISA 362 GDFQK TP RNL+FG REHGMGAICNG+ALH GL+P+ AT+FVFTDYMR A+RI+A Sbjct: 405 SSGDFQKETPTGRNLKFGAREHGMGAICNGVALHSPGLVPFSATYFVFTDYMRAAIRIAA 464
Query: 363 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 LS+A V+Y+MTHDSIGLGEDGPTHQP+EHLASFRAMP IL+LRPADGNET Sbjct: 465 LSKARVVYIMTHDSIGLGEDGPTHQPVEHLASFRAMPNILVLRPADGNET 514
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 257 bits (657), Expect = 2e-68 Identities = 122/170 (71%), Positives = 137/170 (80%) Frame = +3
Query: 3 LLSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLK 182 +++GELP W P YTPE+ G TR LS LN L VLPGLLGGSADL SNM LK Sbjct: 341 IITGELPTNWESIFPTYTPENPGLPTRTLSHQILNGLGDVLPGLLGGSADLTLSNMAFLK 400
Query: 183 MFGDFQKNTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISA 362 GDFQK +P ERN++FG REH MG+ICNG+ALH GL+PYCAT+FVFTDYMR AMRISA Sbjct: 401 NSGDFQKKSPGERNVKFGAREHAMGSICNGLALHSPGLLPYCATYFVFTDYMRAAMRISA 460
Query: 363 LSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 LS+A V+Y+MTHDSIGLGEDGPTHQP+EHLASFRAMP IL LRPADGNET Sbjct: 461 LSKARVLYIMTHDSIGLGEDGPTHQPVEHLASFRAMPNILTLRPADGNET 510
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 231 bits (589), Expect = 1e-60 Identities = 114/169 (67%), Positives = 130/169 (76%) Frame = +3
Query: 6 LSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLKM 185 LSG+L GW LP YTPE G TR S+ CLN L VLP L+GGSADL SN+T +K Sbjct: 337 LSGKLADGWDKVLPSYTPEDKGLPTRKHSETCLNKLAAVLPELIGGSADLTHSNLTEIKG 396
Query: 186 FGDFQKNTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAMRISAL 365 GDFQK N+ FGVREHGMGAICNGIALHGSGLIPY ATF +F+DYMR +R+SAL Sbjct: 397 KGDFQKGQYQNPNIHFGVREHGMGAICNGIALHGSGLIPYGATFLIFSDYMRAPIRLSAL 456
Query: 366 SEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 S+AG I+VMTHDSIG GEDGPTHQPIE LAS RA+P + ++RPADGNET Sbjct: 457 SQAGSIWVMTHDSIGQGEDGPTHQPIETLASLRAIPNLTVIRPADGNET 505
>sp|P33315|TKT2_YEAST Transketolase 2 OS=Saccharomyces cerevisiae GN=TKL2 PE=1 SV=1 Length = 681
Score = 181 bits (460), Expect = 1e-45 Identities = 98/174 (56%), Positives = 117/174 (67%), Gaps = 5/174 (2%) Frame = +3
Query: 6 LSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLKM 185 L+GELP GW LPK+TP+ ATR SQ L +V+VLP L+GGSADL SN+T + Sbjct: 334 LNGELPEGWEKHLPKFTPDDDALATRKTSQQVLTNMVQVLPELIGGSADLTPSNLTRWEG 393
Query: 186 FGDFQK-----NTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAM 350 DFQ A R +R+GVREHGMGAI NGI+ G+ PY TF F Y GA+ Sbjct: 394 AVDFQPPITQLGNYAGRYIRYGVREHGMGAIMNGISAFGANYKPYGGTFLNFVSYAAGAV 453
Query: 351 RISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 R++ALS VI+V THDSIGLGEDGPTHQPIE LA RA+P + + RPADGNET Sbjct: 454 RLAALSGNPVIWVATHDSIGLGEDGPTHQPIETLAHLRAIPNMHVWRPADGNET 507
>sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TKL1 PE=3 SV=1 Length = 679
Score = 181 bits (458), Expect = 2e-45 Identities = 97/173 (56%), Positives = 115/173 (66%), Gaps = 5/173 (2%) Frame = +3
Query: 6 LSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLKM 185 L+GE P GW LP YTPE + A+R LS+ L+ + LP LLGGSADL SN+T K Sbjct: 333 LAGEFPEGWESKLPTYTPEDSAVASRKLSEIVLDNVFDTLPELLGGSADLTPSNLTRSKG 392
Query: 186 FGDFQKNTP-----AERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGAM 350 DFQ + R +R+GVREHGMGAI NGI+ G+ PY TF F Y GA+ Sbjct: 393 AVDFQPPITGLGDYSGRYIRYGVREHGMGAIMNGISAFGANYRPYGGTFLNFVSYASGAV 452
Query: 351 RISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNE 509 R+SALS VI+V THDSIGLGEDGPTHQPIE LA FRA+P + + RPADGNE Sbjct: 453 RLSALSGHPVIWVATHDSIGLGEDGPTHQPIETLAHFRAIPNLQVWRPADGNE 505
>sp|Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyces pombe GN=SPBC2G5.05 PE=2 SV=1 Length = 685
Score = 179 bits (453), Expect = 9e-45 Identities = 97/175 (55%), Positives = 116/175 (66%), Gaps = 5/175 (2%) Frame = +3
Query: 3 LLSGELPAGWVDALPKYTPESAGDATRNLSQACLNALVKVLPGLLGGSADLASSNMTLLK 182 +LS + P GW LP Y P ATR LS+ L+AL VLP L+GGSADL SN+T + Sbjct: 337 ILSRKFPEGWEKHLPVYKPGDKAVATRKLSEIVLDALCPVLPELVGGSADLTPSNLTRWE 396
Query: 183 MFGDFQK-----NTPAERNLRFGVREHGMGAICNGIALHGSGLIPYCATFFVFTDYMRGA 347 DFQ T A R +R+G+REHGM I NG+A++G +IPY TF F Y GA Sbjct: 397 GAADFQPPSSKLGTYAGRYIRYGIREHGMAGIMNGLAVYGP-IIPYGGTFLNFVSYAAGA 455
Query: 348 MRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPYILMLRPADGNET 512 +R++AL+ + VIYV THDSIGLGEDGPTHQPIE A FRAMP I RPADGNET Sbjct: 456 VRMAALNNSRVIYVATHDSIGLGEDGPTHQPIETFAHFRAMPNINCWRPADGNET 510
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84ZY2 |
Definition |
tr|Q84ZY2|Q84ZY2_ORYSJ Putative transketolase OS=Oryza sativa subsp. japonica |
Align length |
170 |
Score (bit) |
316.0 |
E-value |
5.0e-85 |
Report |
|