DK959718 |
Clone id |
TST39A01NGRL0005_H08 |
Library |
TST39 |
Length |
619 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_H08. 5' end sequence. |
Accession |
DK959718 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL140Contig1 |
Sequence |
GGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT CGAGAGAATCACAAGCTAGCTGCATAATAGGGGTCAAATAGCTTTAAAATTTATCAATAT GAGATCAAGAATGTGTTTTGCCTCCCTGTAAAATCCAGCGAAGTGGTTACATGAAAAATG AAGGCCAAGCGATGCGCAGATCTACGCGAAAAAACAGAGGACACAGGTCGGGTGGATGCA AGCACCACCAAAAGATGTCTAATGAAATTATGAACCCCTTTGCCAGCCTTGGCACAAACA CTAATAGCAATCGAGACTACTCGCAAGCAGATCTGGACCTTTCATAGATCGATTCATGTT CCACTCCACCATTCCATATTAAACCACAATACCCACCACCATAAGCCTATCTACTTGTCC TCCACATTGAGCTACATATAAAGACAATACAATTTGAATCAAATCCTCTCTACCTTCTGT GCTTTCACAACTGGGTTTGCCTTGGCTATGGCTTCTCTGCCTGCTGATTTGTAATCAAAA GGGCACCCATGCTTGTCAGAGTATCGATGCGACGCACAAAAGATGTTCCCACAACGACAC TTAAAACCCAATAGCCCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3BDI8 |
Definition |
sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica |
Align length |
52 |
Score (bit) |
90.5 |
E-value |
5.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P8S9 |
Definition |
tr|A9P8S9|A9P8S9_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
52 |
Score (bit) |
99.0 |
E-value |
2.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959718|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_H08, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P8S9|A9P8S9_POPTR Putative uncharacterized protein OS=Popul... 99 2e-19 tr|A1ECK5|A1ECK5_9ROSI Putative multiple stress-responsive zinc-... 98 3e-19 tr|A9P9C0|A9P9C0_POPTR Putative uncharacterized protein OS=Popul... 98 3e-19 tr|B7FGP6|B7FGP6_MEDTR Putative uncharacterized protein OS=Medic... 96 2e-18 tr|A9S5V1|A9S5V1_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|A9PJ34|A9PJ34_POPJC Putative uncharacterized protein OS=Popul... 94 6e-18 tr|A9PEQ1|A9PEQ1_POPTR Putative uncharacterized protein OS=Popul... 94 6e-18 tr|Q0GEA0|Q0GEA0_CAMSI Zinc finger protein OS=Camellia sinensis ... 93 8e-18 tr|A5BFH0|A5BFH0_VITVI Putative uncharacterized protein (Chromos... 93 8e-18 tr|A9RR10|A9RR10_PHYPA Predicted protein OS=Physcomitrella paten... 93 1e-17 tr|A9NYV7|A9NYV7_PICSI Putative uncharacterized protein OS=Picea... 92 2e-17 tr|A9NK82|A9NK82_PICSI Putative uncharacterized protein OS=Picea... 92 2e-17 tr|A5C670|A5C670_VITVI Putative uncharacterized protein OS=Vitis... 92 2e-17 tr|A9RR11|A9RR11_PHYPA Predicted protein (Fragment) OS=Physcomit... 92 2e-17 tr|A9TKL7|A9TKL7_PHYPA Predicted protein OS=Physcomitrella paten... 91 3e-17 tr|A5C6A7|A5C6A7_VITVI Putative uncharacterized protein (Chromos... 91 4e-17 tr|B7E4H0|B7E4H0_ORYSJ cDNA clone:006-301-C11, full insert seque... 91 5e-17 tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea... 90 7e-17 tr|Q6R3I8|Q6R3I8_MAIZE Putative zinc finger protein ZmZf OS=Zea ... 89 1e-16 tr|Q3BCU2|Q3BCU2_MAIZE Zinc finger A20 and AN1 domains-containin... 89 1e-16 tr|B4FDQ8|B4FDQ8_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-16 tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea... 89 1e-16 tr|A6N083|A6N083_ORYSI Zinc finger a20 and an1 domains-containin... 89 1e-16 tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert seque... 89 1e-16 tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|Q9XH71|Q9XH71_PRUAR Putative uncharacterized protein p85RF OS... 89 2e-16 tr|B7FMK7|B7FMK7_MEDTR Putative uncharacterized protein OS=Medic... 89 2e-16 tr|A2Q3D5|A2Q3D5_MEDTR Zinc finger, AN1-type; Zinc finger, A20-t... 89 2e-16 tr|A8QZ71|A8QZ71_MAIZE Putative uncharacterized protein OS=Zea m... 88 3e-16 tr|A9SWR4|A9SWR4_PHYPA Predicted protein OS=Physcomitrella paten... 88 4e-16
>tr|A9P8S9|A9P8S9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 172
Score = 99.0 bits (245), Expect = 2e-19 Identities = 42/52 (80%), Positives = 49/52 (94%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GFKCRCG++FCASHRYSDKH CPFDY+SA REAIAKANPVVKA+K+++I Sbjct: 121 GLTGFKCRCGSLFCASHRYSDKHDCPFDYRSAAREAIAKANPVVKAEKLDKI 172
>tr|A1ECK5|A1ECK5_9ROSI Putative multiple stress-responsive zinc-finger protein OS=Citrus hybrid cultivar PE=2 SV=1 Length = 171
Score = 98.2 bits (243), Expect = 3e-19 Identities = 41/52 (78%), Positives = 48/52 (92%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GF CRCGN+FCA HRYSDKHGCPFDY++A REAIAKANPVVKA+K+++I Sbjct: 120 GLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
>tr|A9P9C0|A9P9C0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 172
Score = 97.8 bits (242), Expect = 3e-19 Identities = 41/52 (78%), Positives = 49/52 (94%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GFKCRCG++FCASHRYSDKH CPFDY++A REAIAKANPVVKA+K+++I Sbjct: 121 GLTGFKCRCGDLFCASHRYSDKHDCPFDYRTAAREAIAKANPVVKAEKLDKI 172
>tr|B7FGP6|B7FGP6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 172
Score = 95.5 bits (236), Expect = 2e-18 Identities = 39/52 (75%), Positives = 48/52 (92%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GF CRCGN++CA HRYSDKH CPFDY++AGR+AIAKANPVVKA+K+++I Sbjct: 121 GLTGFNCRCGNLYCAVHRYSDKHDCPFDYRTAGRDAIAKANPVVKAEKLDKI 172
>tr|A9S5V1|A9S5V1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124611 PE=4 SV=1 Length = 162
Score = 95.1 bits (235), Expect = 2e-18 Identities = 41/52 (78%), Positives = 46/52 (88%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GFKCRCGN FC+ HRYSDKH C FDYK+AGR+AIAKANPVVKA KV++I Sbjct: 111 GLTGFKCRCGNTFCSLHRYSDKHSCTFDYKTAGRDAIAKANPVVKADKVDKI 162
>tr|A9PJ34|A9PJ34_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 170
Score = 93.6 bits (231), Expect = 6e-18 Identities = 39/52 (75%), Positives = 47/52 (90%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GF CRCGN+FCA HRYSDKH CPFDY++A R+AIAKANPVVKA+K+++I Sbjct: 119 GLTGFGCRCGNLFCAIHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 170
>tr|A9PEQ1|A9PEQ1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 170
Score = 93.6 bits (231), Expect = 6e-18 Identities = 39/52 (75%), Positives = 47/52 (90%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GF CRCGN+FCA HRYSDKH CPFDY++A R+AIAKANPVVKA+K+++I Sbjct: 119 GLTGFGCRCGNLFCAIHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 170
>tr|Q0GEA0|Q0GEA0_CAMSI Zinc finger protein OS=Camellia sinensis PE=2 SV=1 Length = 173
Score = 93.2 bits (230), Expect = 8e-18 Identities = 38/52 (73%), Positives = 47/52 (90%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GF CRCGN+FCA HRYSDKH CPFDY+SA ++AIAKANPVVKA+K++++ Sbjct: 122 GLTGFNCRCGNLFCAVHRYSDKHDCPFDYRSAAQDAIAKANPVVKAEKLDKL 173
>tr|A5BFH0|A5BFH0_VITVI Putative uncharacterized protein (Chromosome chr8 scaffold_34, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00025538001 PE=4 SV=1 Length = 172
Score = 93.2 bits (230), Expect = 8e-18 Identities = 38/52 (73%), Positives = 47/52 (90%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GF C+CGN+FCA HRYSDKH CPFDY++A R+AIAKANPVVKA+K+++I Sbjct: 121 GLTGFNCKCGNLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 172
>tr|A9RR10|A9RR10_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105045 PE=4 SV=1 Length = 172
Score = 92.8 bits (229), Expect = 1e-17 Identities = 38/52 (73%), Positives = 47/52 (90%) Frame = -3
Query: 557 GLLGFKCRCGNIFCASHRYSDKHGCPFDYKSAGREAIAKANPVVKAQKVERI 402 GL GF+CRCGN+FC++HRYSDKH C FDYK+AGR+AI+KANPVVKA K+ +I Sbjct: 121 GLTGFECRCGNLFCSAHRYSDKHSCTFDYKTAGRDAISKANPVVKADKMNKI 172
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