DK959722 |
Clone id |
TST39A01NGRL0005_H12 |
Library |
TST39 |
Length |
532 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_H12. 5' end sequence. |
Accession |
DK959722 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL537Contig1 |
Sequence |
CTGGGTTTGCCGGTGATGATGCTCCCCGGGCTGTCTTTCCTAGCATTGTGGGTCGTCCGC GACACACAGGGGTCATGGTGGGTATGGGCCAAAAAGATGCATATGTAGGTGATGAAGCTC AATCGAAACGTGGTATACTCACCTTGAAATATCCCATTGAGCATGGGATTGTTACAAATT GGGACGATATGGAAAAGATATGGCACCATACATTTTACAATGAGCTTCGTGTTGCACCAG AGGAGCACCCAGTCCTGCTCACCGAAGCCCCATTAAATCCCAAAGCCAATCGTGAGAAGA TGACCCAAATCATGTTTGACACATTCAATGCTCCAGCTATGTATGTTGCCATTCAGGCTG TACTTTCTCTTTATGCAAGTGGAAGGACCACAGGTATTGTGCTTGATTCTGGCGATGGAG TCACACACACAGTGCCCATATATGAGGGTTATGCATTGCCACATGCTATCCTCCGTCTTG ACCTTGCAGGTCGGGATTTGACGGATGCTCTTATGAAGATTCTTACCGAGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O81221 |
Definition |
sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum |
Align length |
176 |
Score (bit) |
355.0 |
E-value |
7.0e-98 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959722|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_H12, 5' (532 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum PE=3 SV=1 355 7e-98 sp|Q10AZ4|ACT3_ORYSJ Actin-3 OS=Oryza sativa subsp. japonica GN=... 355 1e-97 sp|A2XNS1|ACT3_ORYSI Actin-3 OS=Oryza sativa subsp. indica GN=AC... 355 1e-97 sp|P10671|ACT1_ARATH Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 P... 355 1e-97 sp|P02578|ACT1_ACACA Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1 353 2e-97 sp|Q26065|ACT_PLAMG Actin, adductor muscle OS=Placopecten magell... 353 4e-97 sp|P53464|ACTM_HELTB Actin, cytoskeletal OS=Heliocidaris tubercu... 353 4e-97 sp|P53463|ACTM_HELER Actin, cytoskeletal OS=Heliocidaris erythro... 353 4e-97 sp|P53492|ACT7_ARATH Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=... 353 4e-97 sp|O65316|ACT_MESVI Actin OS=Mesostigma viride PE=3 SV=1 352 5e-97 sp|O16808|ACT_MAYDE Actin OS=Mayetiola destructor PE=2 SV=1 352 5e-97 sp|P46258|ACT3_PEA Actin-3 OS=Pisum sativum PE=2 SV=1 352 5e-97 sp|P91754|ACT_LUMRU Actin (Fragment) OS=Lumbricus rubellus PE=2 ... 352 8e-97 sp|P81229|ACT8_SOLTU Actin-79 (Fragment) OS=Solanum tuberosum PE... 352 8e-97 sp|P81228|ACT5_SOLTU Actin-66 (Fragment) OS=Solanum tuberosum PE... 352 8e-97 sp|P53458|ACT5_DIPDE Actin-5 (Fragment) OS=Diphyllobothrium dend... 352 8e-97 sp|P92176|ACT2_LUMTE Actin-2 OS=Lumbricus terrestris GN=ACT2 PE=... 352 8e-97 sp|Q05214|ACT1_TOBAC Actin OS=Nicotiana tabacum PE=3 SV=1 352 8e-97 sp|P53504|ACT1_SORBI Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1 352 8e-97 sp|Q10DV7|ACT1_ORYSJ Actin-1 OS=Oryza sativa subsp. japonica GN=... 352 8e-97 sp|A2XLF2|ACT1_ORYSI Actin-1 OS=Oryza sativa subsp. indica GN=AC... 352 8e-97 sp|P92182|ACT1_LUMTE Actin-1 OS=Lumbricus terrestris GN=ACT1 PE=... 352 8e-97 sp|P53496|ACT11_ARATH Actin-11 OS=Arabidopsis thaliana GN=ACT11 ... 352 8e-97 sp|P30170|ACT10_SOLTU Actin-85C (Fragment) OS=Solanum tuberosum ... 352 8e-97 sp|P02576|ACTA_PHYPO Actin, plasmodial isoform OS=Physarum polyc... 351 1e-96 sp|P53494|ACT4_ARATH Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=... 351 1e-96 sp|P30163|ACT2_ONCVO Actin-2 OS=Onchocerca volvulus GN=act-2b PE... 351 1e-96 sp|P10984|ACT2_CAEEL Actin-2 OS=Caenorhabditis elegans GN=act-2 ... 351 1e-96 sp|P30162|ACT1_ONCVO Actin-1 OS=Onchocerca volvulus GN=act-1a PE... 351 1e-96 sp|P53497|ACT12_ARATH Actin-12 OS=Arabidopsis thaliana GN=ACT12 ... 351 1e-96
>sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum PE=3 SV=1 Length = 377
Score = 355 bits (911), Expect = 7e-98 Identities = 173/176 (98%), Positives = 175/176 (99%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV NW Sbjct: 22 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNW 81
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF+TFNAPAMYVAIQAV Sbjct: 82 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 141
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 197
>sp|Q10AZ4|ACT3_ORYSJ Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1 Length = 377
Score = 355 bits (910), Expect = 1e-97 Identities = 172/176 (97%), Positives = 174/176 (98%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV NW Sbjct: 22 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNW 81
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF+TFNAPAMYVAIQAV Sbjct: 82 DDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 141
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTE Sbjct: 142 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTE 197
>sp|A2XNS1|ACT3_ORYSI Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2 Length = 377
Score = 355 bits (910), Expect = 1e-97 Identities = 172/176 (97%), Positives = 174/176 (98%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV NW Sbjct: 22 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNW 81
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF+TFNAPAMYVAIQAV Sbjct: 82 DDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 141
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTE Sbjct: 142 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTE 197
>sp|P10671|ACT1_ARATH Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2 Length = 377
Score = 355 bits (910), Expect = 1e-97 Identities = 172/176 (97%), Positives = 175/176 (99%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV NW Sbjct: 22 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNW 81
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF+TFNAPAMYVAIQAV Sbjct: 82 DDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 141
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 197
>sp|P02578|ACT1_ACACA Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1 Length = 375
Score = 353 bits (907), Expect = 2e-97 Identities = 172/176 (97%), Positives = 174/176 (98%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIVTNW Sbjct: 20 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 79
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF+TFN PAMYVAIQAV Sbjct: 80 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 139
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTE Sbjct: 140 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 195
>sp|Q26065|ACT_PLAMG Actin, adductor muscle OS=Placopecten magellanicus PE=2 SV=1 Length = 376
Score = 353 bits (905), Expect = 4e-97 Identities = 172/176 (97%), Positives = 174/176 (98%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIVTNW Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF+TFNAPAMYVAIQAV Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTE Sbjct: 141 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
>sp|P53464|ACTM_HELTB Actin, cytoskeletal OS=Heliocidaris tuberculata PE=3 SV=1 Length = 376
Score = 353 bits (905), Expect = 4e-97 Identities = 172/176 (97%), Positives = 174/176 (98%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIVTNW Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF+TFNAPAMYVAIQAV Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTE Sbjct: 141 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
>sp|P53463|ACTM_HELER Actin, cytoskeletal OS=Heliocidaris erythrogramma PE=3 SV=1 Length = 376
Score = 353 bits (905), Expect = 4e-97 Identities = 172/176 (97%), Positives = 174/176 (98%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIVTNW Sbjct: 21 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 80
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF+TFNAPAMYVAIQAV Sbjct: 81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 140
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTE Sbjct: 141 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 196
>sp|P53492|ACT7_ARATH Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1 Length = 377
Score = 353 bits (905), Expect = 4e-97 Identities = 171/176 (97%), Positives = 175/176 (99%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NW Sbjct: 22 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNW 81
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF+TFN PAMYVAIQAV Sbjct: 82 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAV 141
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTE Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTE 197
>sp|O65316|ACT_MESVI Actin OS=Mesostigma viride PE=3 SV=1 Length = 377
Score = 352 bits (904), Expect = 5e-97 Identities = 172/176 (97%), Positives = 173/176 (98%) Frame = +3
Query: 3 GFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 182 GFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW Sbjct: 22 GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNW 81
Query: 183 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFDTFNAPAMYVAIQAV 362 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF+TFN PAMYVAIQAV Sbjct: 82 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAV 141
Query: 363 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 530 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTE Sbjct: 142 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 197
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O82564 |
Definition |
tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis |
Align length |
176 |
Score (bit) |
360.0 |
E-value |
2.0e-98 |
Report |
|