DK959727 |
Clone id |
TST39A01NGRL0005_H17 |
Library |
TST39 |
Length |
696 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_H17. 5' end sequence. |
Accession |
DK959727 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL405Contig1 |
Sequence |
CTCGATGACTGTACGCACGACCGATCTTCGTCTTCCTCTACGGCAGAGAGCTTGAACGGA GAGCATGGGGCGACCGCCGTCAGGAGAAATGCCCGTTTTTCGATTTCTGCCGAACGAGGT GAACAAACTACTGAGCCTTTGGGAGGATTGCAAAATTAGTGGTCCACCTAATGAAGTTCT GCAAGATCTAGTTGAGAAGTTCAGCAAAGCCAGAGAGCAAGATGGGAAAGGATGTGTGAA TCGAAGGCAGGTGCTCCAGTGGTTTCAAAACAGACGGTGGTATGTACGTAAACAGGCAGA GAAACAATTGGGAAGGCTATCTGATAAAGAGTCCTTTTCGGAGAGGACGCAAACTACCAT CAGTCCTCTCTCAGATGATTTAGATGTAGCTACCCCCACCACTCCTCCCTCAGATGAGAT AGACATGAGTACAGTAGAGTTTGAAGCAAAGTCATCTAAAGATGGTGCTTGGTATGATGT GCGAACATTCTTAGAGCACAGAATGCTCGACTCTGGACCAGAAGTACGTGTGCGCTTTGC AGGCTATGGGCCAGAAGATGATGAATGGGTGGATGTCAGAAGCGCCGTTCGGCAGCGCTC CTTAGCCTGTGAAGAATCAGATTGTACCTCTATCTTTCGTGGAGACATGGTTCTTTGCTT TTTGGAAGGGACCAAGCAGGCGCTTTTTCTATGATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q60554 |
Definition |
sp|Q60554|NKX61_MESAU Homeobox protein Nkx-6.1 OS=Mesocricetus auratus |
Align length |
74 |
Score (bit) |
37.0 |
E-value |
0.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNE3 |
Definition |
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
212 |
Score (bit) |
184.0 |
E-value |
5.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959727|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_H17, 5' (696 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea... 184 5e-45 tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g1838... 172 2e-41 tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Ar... 172 2e-41 tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea m... 170 9e-41 tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert seque... 169 2e-40 tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea m... 163 1e-38 tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea m... 145 3e-33 tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aest... 134 6e-30 tr|Q9LS52|Q9LS52_ARATH Gb|AAD39678.1 OS=Arabidopsis thaliana PE=... 131 4e-29 tr|A7P1U9|A7P1U9_VITVI Chromosome chr19 scaffold_4, whole genome... 127 9e-28 tr|A2YD14|A2YD14_ORYSI Putative uncharacterized protein OS=Oryza... 124 6e-27 tr|B4FBT7|B4FBT7_MAIZE Putative uncharacterized protein OS=Zea m... 123 1e-26 tr|A7P4B6|A7P4B6_VITVI Chromosome chr4 scaffold_6, whole genome ... 121 4e-26 tr|A5C728|A5C728_VITVI Putative uncharacterized protein OS=Vitis... 119 1e-25 tr|A7P748|A7P748_VITVI Chromosome chr9 scaffold_7, whole genome ... 119 2e-25 tr|Q0DC52|Q0DC52_ORYSJ Os06g0483900 protein (Fragment) OS=Oryza ... 116 1e-24 tr|Q6ES95|Q6ES95_ORYSJ Os09g0346900 protein OS=Oryza sativa subs... 112 2e-23 tr|B8BEP8|B8BEP8_ORYSI Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|Q9XI47|Q9XI47_ARATH F9L1.16 (Uncharacterized protein At1g1521... 107 7e-22 tr|A8MRU8|A8MRU8_ARATH Uncharacterized protein At1g15215.3 OS=Ar... 107 7e-22 tr|B8B2E9|B8B2E9_ORYSI Putative uncharacterized protein OS=Oryza... 106 1e-21 tr|A3BBV7|A3BBV7_ORYSJ Putative uncharacterized protein OS=Oryza... 106 1e-21 tr|Q8GYR2|Q8GYR2_ARATH Putative uncharacterized protein (Putativ... 105 3e-21 tr|Q0DC47|Q0DC47_ORYSJ Os06g0485100 protein OS=Oryza sativa subs... 100 9e-20 tr|A3BXT4|A3BXT4_ORYSJ Putative uncharacterized protein OS=Oryza... 89 3e-16 tr|A5BT31|A5BT31_VITVI Putative uncharacterized protein OS=Vitis... 85 4e-15 tr|Q2PEU2|Q2PEU2_TRIPR Putative uncharacterized protein OS=Trifo... 84 9e-15 tr|A3BBU9|A3BBU9_ORYSJ Putative uncharacterized protein OS=Oryza... 80 2e-13 tr|A7P1V0|A7P1V0_VITVI Chromosome chr19 scaffold_4, whole genome... 75 3e-12 tr|B4FI09|B4FI09_MAIZE Putative uncharacterized protein OS=Zea m... 71 8e-11
>tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 373
Score = 184 bits (467), Expect = 5e-45 Identities = 97/212 (45%), Positives = 136/212 (64%), Gaps = 4/212 (1%) Frame = +2
Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 244 MGRPP PVFRF EV ++ + ED K + P ++++ L EKFS + E+DGK V Sbjct: 1 MGRPPLSGAPVFRFSSKEVQEMEKVLEDTKGAIPNRDMIRSLAEKFSASPERDGKILVQI 60
Query: 245 RQVLQWFQNRRWYVRKQAEKQLGRLSDK---ESFSERTQTTISPLSDDLDVATPTTPPSD 415 +QV WFQN+R+ + ++ K G + +S ++R T+ + + V Sbjct: 61 KQVWTWFQNKRYSQKTKSTKVQGNAAPSPRDDSVAKRAVTSSAAVPSGRKVP-------- 112
Query: 416 EIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVR 592 D + +EFEAKSS+DGAWYDV +F+ HRM +SG PEVRVRFAG+G E+DEWV+VR VR Sbjct: 113 --DGAEMEFEAKSSRDGAWYDVASFVTHRMFESGDPEVRVRFAGFGAEEDEWVNVRKCVR 170
Query: 593 QRSLACEESDCTSIFRGDMVLCFLEGTKQALF 688 QRSL CE S+C ++ GD++LCF EG +QAL+ Sbjct: 171 QRSLPCESSECVAVLPGDLILCFQEGKEQALY 202
>tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g18380 OS=Arabidopsis thaliana GN=At3g18380 PE=2 SV=1 Length = 348
Score = 172 bits (435), Expect = 2e-41 Identities = 97/230 (42%), Positives = 138/230 (60%), Gaps = 22/230 (9%) Frame = +2
Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 244 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 245 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 388 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 389 ATPTTPPSDEI---------DMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRF 538 TP PS + D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRF Sbjct: 121 MTPA--PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRF 178
Query: 539 AGYGPEDDEWVDVRSAVRQRSLACEESDCTSIFRGDMVLCFLEGTKQALF 688 AG+ E+DEW++V+ VRQRSL CE S+C ++ GD+VLCF EG QAL+ Sbjct: 179 AGFEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALY 228
>tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Arabidopsis thaliana GN=At3g18380 PE=4 SV=1 Length = 349
Score = 172 bits (435), Expect = 2e-41 Identities = 97/230 (42%), Positives = 138/230 (60%), Gaps = 22/230 (9%) Frame = +2
Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 244 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 245 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 388 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 389 ATPTTPPSDEI---------DMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRF 538 TP PS + D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRF Sbjct: 121 MTPA--PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRF 178
Query: 539 AGYGPEDDEWVDVRSAVRQRSLACEESDCTSIFRGDMVLCFLEGTKQALF 688 AG+ E+DEW++V+ VRQRSL CE S+C ++ GD+VLCF EG QAL+ Sbjct: 179 AGFEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALY 228
>tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 170 bits (430), Expect = 9e-41 Identities = 91/219 (41%), Positives = 128/219 (58%), Gaps = 11/219 (5%) Frame = +2
Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 244 MGRPPS P FRFLP+EV ++ + P VLQ L +KFS + E+ GK + Sbjct: 1 MGRPPSAGAPAFRFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPERAGKVAIQP 60
Query: 245 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVAT---------- 394 +QV WFQNRR+ R + + K + S + + A Sbjct: 61 KQVWNWFQNRRYSHRAKTPRAASSPPAKMTPSGADHHQHAANASAFRAAQLSSVAAAHHG 120
Query: 395 PTTPPSDEIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWV 571 ++ + ++ +VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW+ Sbjct: 121 SSSTGKNPVESVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWI 180
Query: 572 DVRSAVRQRSLACEESDCTSIFRGDMVLCFLEGTKQALF 688 +VR VRQRSL CE ++C ++ GD++LCF EG QAL+ Sbjct: 181 NVRKCVRQRSLPCEATECVAVLPGDLILCFQEGKDQALY 219
>tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1568_D07.5-1 PE=2 SV=1 Length = 370
Score = 169 bits (428), Expect = 2e-40 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Frame = +2
Query: 65 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 244 MGRPPS P FRF EV ++ + + + P V+Q L +KF+ + + GK V Sbjct: 1 MGRPPSTGGPAFRFTQAEVAEMEARLQQLNNAIPHRSVIQALADKFTSSPARSGKVAVQP 60
Query: 245 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTT-PPSDE- 418 +QV WFQNRR+ R ++ + L + + SP + A+ + PS + Sbjct: 61 KQVWNWFQNRRYSHRSRSSRGPPTLMQTKMLPTGSDEHKSPPFRAMPSASAHSGSPSGKG 120
Query: 419 -IDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVR 592 ++ VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW++VR VR Sbjct: 121 SLESGQVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVR 180
Query: 593 QRSLACEESDCTSIFRGDMVLCFLEGTKQALF 688 QRSL CE ++C ++ GD++LCF EG +QAL+ Sbjct: 181 QRSLPCESTECVAVLPGDLILCFQEGKEQALY 212
>tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 382
Score = 163 bits (412), Expect = 1e-38 Identities = 90/220 (40%), Positives = 130/220 (59%), Gaps = 12/220 (5%) Frame = +2
Query: 65 MGRPPSGE-MPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVN 241 MGRPPS P FRFLP+EV ++ + P +LQ L +KFS + E+ GK + Sbjct: 1 MGRPPSTTGAPAFRFLPSEVAEMEARLLQLNNGIPTRAMLQTLADKFSASPERAGKVAIQ 60
Query: 242 RRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPP---- 409 +QV WFQNRR+ R + + + K + S + + A P++ Sbjct: 61 PKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSGADHHQHAANASAFRAAQPSSVAVAHH 120
Query: 410 ------SDEIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEW 568 + ++ +VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW Sbjct: 121 GSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEW 180
Query: 569 VDVRSAVRQRSLACEESDCTSIFRGDMVLCFLEGTKQALF 688 ++VR VRQRSL CE ++C ++ GD++LCF E +QAL+ Sbjct: 181 INVRKCVRQRSLPCEATECVAVLPGDLILCFQEDKEQALY 220
>tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 360
Score = 145 bits (365), Expect = 3e-33 Identities = 76/186 (40%), Positives = 112/186 (60%), Gaps = 11/186 (5%) Frame = +2
Query: 164 PPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSE 343 P +LQ L +KFS + E+ GK + +QV WFQNRR+ R + + + K + S Sbjct: 13 PTRAMLQTLADKFSASPERAGKVAIQPKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSG 72
Query: 344 RTQTTISPLSDDLDVATPTTPP----------SDEIDMSTVEFEAKSSKDGAWYDVRTFL 493 + + A P++ + ++ +VEFEAKS++DGAWYDV FL Sbjct: 73 ADHHQHAANASAFRAAQPSSVAVAHHGSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFL 132
Query: 494 EHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVRQRSLACEESDCTSIFRGDMVLCFLEG 670 HR+ +SG PEVRVRF+G+G E+DEW++VR VRQRSL CE ++C ++ GD++LCF E Sbjct: 133 SHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVRQRSLPCEATECVAVLPGDLILCFQED 192
Query: 671 TKQALF 688 +QAL+ Sbjct: 193 KEQALY 198
>tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aestivum GN=HLRG PE=2 SV=1 Length = 337
Score = 134 bits (337), Expect = 6e-30 Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 5/208 (2%) Frame = +2
Query: 80 SGEMP--VFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKA--REQDGKGCVNRR 247 +G+ P +FRF EV K+ + D P + V+Q L + F+ + R DGK V Sbjct: 2 TGQAPSLLFRFTDTEVAKMEEVLRDLNAM-PKHPVIQGLTDDFNASPDRSGDGKVPVQYN 60
Query: 248 QVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSDEIDM 427 QV WFQNRR Q+ K + + P++++ + + +D Sbjct: 61 QVRNWFQNRR---SAQSRKMM----------------VPPVAEEHHPVDGSYSGNSSLDG 101
Query: 428 STVEFEAKSSKDGAWYDVRTFLEHRMLDS-GPEVRVRFAGYGPEDDEWVDVRSAVRQRSL 604 V+FEAKS+ +GAWYDV FL HR + + PEV VRF GPE+DEW++VR VR RSL Sbjct: 102 GHVQFEAKSAINGAWYDVAAFLSHRFIGTKDPEVLVRFTWLGPEEDEWINVRKCVRLRSL 161
Query: 605 ACEESDCTSIFRGDMVLCFLEGTKQALF 688 CE ++C ++ GD++LCF EG +QAL+ Sbjct: 162 PCEAAECVAVLPGDLILCFQEGKEQALY 189
>tr|Q9LS52|Q9LS52_ARATH Gb|AAD39678.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 323
Score = 131 bits (330), Expect = 4e-29 Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 22/197 (11%) Frame = +2
Query: 164 PPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWYVRKQAEKQLGRLS----DKE 331 P +L+ L +KFS++ E+ GK V Q +R+ +R + K G+L+ + Sbjct: 18 PGRHILEALADKFSESPERKGKVVV---------QFKRYALRARGNKAPGKLNVSSMPRM 68
Query: 332 SFSERTQTTISPLS--------DDLDVATPTTPPSDEI---------DMSTVEFEAKSSK 460 + ++ I PLS +L TP PS + D S +EFEAKS++ Sbjct: 69 DLPNQMRSVIQPLSVPKTTHMTGNLPGMTPA--PSGSLVPGVMRSGSDNSYLEFEAKSAR 126
Query: 461 DGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVRQRSLACEESDCTSIF 637 DGAWYDV+ FL HR L+ G PEV+VRFAG+ E+DEW++V+ VRQRSL CE S+C ++ Sbjct: 127 DGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVL 186
Query: 638 RGDMVLCFLEGTKQALF 688 GD+VLCF EG QAL+ Sbjct: 187 AGDLVLCFQEGKDQALY 203
>tr|A7P1U9|A7P1U9_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027761001 PE=4 SV=1 Length = 296
Score = 127 bits (318), Expect = 9e-28 Identities = 61/107 (57%), Positives = 77/107 (71%), Gaps = 1/107 (0%) Frame = +2
Query: 371 SDDLDVATPTTPPSDEIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLD-SGPEVRVRFAGY 547 +D + V P S D S +EFEAKS++DGAWYDV FL HR LD S P+V VRFAG+ Sbjct: 27 TDLILVPVPNAGKSAPSDSSQMEFEAKSARDGAWYDVAAFLSHRYLDTSDPDVLVRFAGF 86
Query: 548 GPEDDEWVDVRSAVRQRSLACEESDCTSIFRGDMVLCFLEGTKQALF 688 GPE+DEWV+V+ VRQRSL CE S+C + GD++LCF EG +QAL+ Sbjct: 87 GPEEDEWVNVKRNVRQRSLPCESSECVVVIPGDLILCFQEGKEQALY 133
|