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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959734
Clone id TST39A01NGRL0005_H24
Library
Length 622
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_H24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCCCCAAGCTTCCATGGCTTCCTCCGTTGCCTCCCCCGCTGTTGCATCGCTTCAAGCTGT
CCAGGGCTTAGGACCGTCCCCTTGCACTGGGCAGGCAGTGCCTGCGTCGGCATTCCTTGG
AGCTGGATTGAAGAAGTCCAACATCTCCATCACACCGGCTACTAGCTCTGCAAAGCCATT
GGTGGTGCACGCTTCGGAGGATGAGTCGAAGCAGACCAAGAAGGATAAATGGGCAGGACT
TGCATACGACACTTCCGATGATCAGCAAGACATTACAAGAGGGAAAGGGATGGTGGATGC
CCTCTTCCAAGGGGCAGTTGGCTTGGGTACCCAGCATGCTGTCATGAGTTCCTACGAGTA
CATCAGCACTGGTCAGAGGACTTTCCAGATGGACAACATGAAGGATGGGTACTACATCGC
ACCGGCTTTCATGGACAAGTTGGTGGTGCACATTGCCAAGAACTTTATGAACCTTCCCAA
TATTAAGATTCCTTTGATTCTTGGTATTTGGGGTGGAAAAGGACAAGGAAAATCTTTCCA
GTGTGAACTAGTGTTCTCAAAGCTTGGAATCAACCCCATCATGATGAGTGCTGGTGAGCT
CGAGAGTGGAAATGCTGGTGAA
■■Homology search results ■■ -
sp_hit_id Q40281
Definition sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica
Align length 176
Score (bit) 258.0
E-value 2.0e-68
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959734|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_H24, 5'
         (622 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   258   2e-68
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   253   7e-67
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   251   2e-66
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   251   2e-66
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   250   4e-66
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   245   2e-64
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   242   1e-63
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   242   1e-63
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   240   5e-63
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   238   1e-62
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   238   1e-62
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   236   7e-62
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   236   7e-62
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   234   3e-61
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   227   4e-59
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   182   2e-45
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...   103   7e-22
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...   103   9e-22
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...   100   8e-21
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    44   9e-04
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ...    33   0.91 
sp|Q9JJG0|TACC2_MOUSE Transforming acidic coiled-coil-containing...    33   1.2  
sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE...    33   1.5  
sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio...    32   2.0  
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ...    32   2.0  
sp|P42375|CH60_PORGI 60 kDa chaperonin OS=Porphyromonas gingival...    32   2.0  
sp|P00789|CANX_CHICK Calpain-1 catalytic subunit OS=Gallus gallu...    32   2.0  
sp|O95359|TACC2_HUMAN Transforming acidic coiled-coil-containing...    32   3.4  
sp|Q4KM73|KCY_RAT UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 P...    32   3.4  
sp|Q9DBP5|KCY_MOUSE UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1...    32   3.4  

>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  258 bits (658), Expect = 2e-68
 Identities = 127/176 (72%), Positives = 143/176 (81%)
 Frame = +2

Query: 95  AVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDI 274
           +VP+S FLG+ LKK N   T +  S+  L + AS DE KQT KD+W GLA+DTSDDQQDI
Sbjct: 26  SVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDI 85

Query: 275 TRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHI 454
           TRGKG VD+LFQ   G GT  A+MSSYEYISTG R +  DN  DGYYIAPAFMDKLVVHI
Sbjct: 86  TRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHI 145

Query: 455 AKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
            KNFM LPN+K+PLILGIWGGKGQGKSFQCELVF+K+ I+PIMMSAGELESGNAGE
Sbjct: 146 TKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGE 201


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  253 bits (645), Expect = 7e-67
 Identities = 127/182 (69%), Positives = 143/182 (78%), Gaps = 4/182 (2%)
 Frame = +2

Query: 89  GQAVPASAFLGAGLKKSNISITP----ATSSAKPLVVHASEDESKQTKKDKWAGLAYDTS 256
           G + P SAF G  LKK+  S  P       S K +      +ES+QT KD+W GLAYD S
Sbjct: 24  GASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDIS 83

Query: 257 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 436
           DDQQDITRGKGMVD LFQ  +  GT +AVMSSYEY+STG R  Q+DN+KDG+YIAPAF+D
Sbjct: 84  DDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLD 141

Query: 437 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 616
           KLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 142 KLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 201

Query: 617 GE 622
           GE
Sbjct: 202 GE 203


>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  251 bits (642), Expect = 2e-66
 Identities = 127/185 (68%), Positives = 142/185 (76%)
 Frame = +2

Query: 68  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 247
           L  S      VP++AF G+ LKKS     P  SS    +V     E +QT KDKW GLAY
Sbjct: 18  LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 248 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 427
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSY+YIS G R + +DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 428 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 607
           FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 608 GNAGE 622
           GNAGE
Sbjct: 197 GNAGE 201


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  251 bits (642), Expect = 2e-66
 Identities = 127/185 (68%), Positives = 142/185 (76%)
 Frame = +2

Query: 68  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 247
           L  S      VP++AF G+ LKKS     P  SS    +V     E +QT KDKW GLAY
Sbjct: 18  LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 248 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 427
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSY+YIS G R + +DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 428 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 607
           FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 608 GNAGE 622
           GNAGE
Sbjct: 197 GNAGE 201


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  250 bits (639), Expect = 4e-66
 Identities = 124/178 (69%), Positives = 142/178 (79%)
 Frame = +2

Query: 89  GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 268
           G  VP SAFLG+ LK S+   T    +    +V A +DE KQT+KDKW GLA+DTSDDQQ
Sbjct: 22  GGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIV-AEQDEEKQTEKDKWRGLAFDTSDDQQ 80

Query: 269 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 448
           DITRGKG+ D LFQ  +G GT +AV+SSYEYIS G R +  DN  DG+YIAPAFMDKL V
Sbjct: 81  DITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTV 140

Query: 449 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           HI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGE
Sbjct: 141 HIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 198


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  245 bits (625), Expect = 2e-64
 Identities = 120/182 (65%), Positives = 147/182 (80%), Gaps = 4/182 (2%)
 Frame = +2

Query: 89  GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 256
           G + P+SAF G  LKK   S +  +  TS +  +V    E +E++QT+ D+W GLAYD S
Sbjct: 24  GASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVS 83

Query: 257 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 436
           DDQQDITRGKG+VD+LFQ  +  GT +AV+SS++Y+S G R +  DN+KDG+YIAPAF+D
Sbjct: 84  DDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLD 143

Query: 437 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 616
           KLVVHIAKNFM LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 144 KLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 203

Query: 617 GE 622
           GE
Sbjct: 204 GE 205


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  242 bits (618), Expect = 1e-63
 Identities = 121/177 (68%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
 Frame = +2

Query: 95  AVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQD 271
           + PAS FLG  +   S  + +   S+    V+   ED  KQT  D+W GLAYDTSDDQQD
Sbjct: 27  SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKED--KQTDGDRWRGLAYDTSDDQQD 84

Query: 272 ITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVH 451
           ITRGKGMVD++FQ  +G GT HAV+SSYEY+S G R + +DNM DG+YIAPAFMDKLVVH
Sbjct: 85  ITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVH 144

Query: 452 IAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           I KNF+ LPNIK+PLILGIWGGKGQGKSFQCELV +K+GINPIMMSAGELESGNAGE
Sbjct: 145 ITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGE 201


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  242 bits (618), Expect = 1e-63
 Identities = 120/182 (65%), Positives = 138/182 (75%), Gaps = 4/182 (2%)
 Frame = +2

Query: 89  GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 256
           G +VP++AF G  LKK     +S    T+ +  +V    + D  KQT  D+W GL  D S
Sbjct: 24  GTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFS 83

Query: 257 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 436
           DDQQDITRGKGMVD+LFQ   G GT HAV+ SYEY+S G R + +DN  DG+YIAPAFMD
Sbjct: 84  DDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMD 143

Query: 437 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 616
           KLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF K+GINPIMMSAGELESGNA
Sbjct: 144 KLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNA 203

Query: 617 GE 622
           GE
Sbjct: 204 GE 205


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  240 bits (612), Expect = 5e-63
 Identities = 125/181 (69%), Positives = 140/181 (77%), Gaps = 7/181 (3%)
 Frame = +2

Query: 101 PASA---FLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSD 259
           PAS    FLG  LKK   S ++    +S+     V A E DE KQT +D+W GLAYD SD
Sbjct: 12  PASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISD 71

Query: 260 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 439
           DQQDITRGKG VD+LFQ   G GT  AV+SSYEY+S G RT+  DN   G+YIAPAFMDK
Sbjct: 72  DQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDK 131

Query: 440 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 619
           LVVHI+KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG
Sbjct: 132 LVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 191

Query: 620 E 622
           E
Sbjct: 192 E 192


>sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Solanum pennellii PE=2 SV=1
          Length = 459

 Score =  238 bits (608), Expect = 1e-62
 Identities = 119/181 (65%), Positives = 141/181 (77%), Gaps = 3/181 (1%)
 Frame = +2

Query: 89  GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSD 259
           G +VP++AF G  LKK     +S +P  S+    VV    DE   TK+D+W GL  +TSD
Sbjct: 24  GTSVPSTAFFGKSLKKVYAKGVS-SPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSD 79

Query: 260 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 439
           DQQDI RGKG+VD+LFQ   G GT HA+M+SYEY+S   +T+Q+DN  DG+YIAPAFMDK
Sbjct: 80  DQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDK 139

Query: 440 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 619
           LVVHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF K+GINPIMMSAGELESGNAG
Sbjct: 140 LVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAG 199

Query: 620 E 622
           E
Sbjct: 200 E 200
tr_hit_id A7PIQ8
Definition tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera
Align length 178
Score (bit) 265.0
E-value 2.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959734|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_H24, 5'
         (622 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   265   2e-69
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   264   4e-69
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   262   1e-68
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   262   1e-68
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   258   2e-67
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   257   4e-67
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   256   1e-66
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   256   1e-66
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   255   2e-66
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   255   2e-66
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   255   2e-66
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   253   8e-66
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   253   8e-66
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   253   8e-66
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   251   2e-65
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   251   2e-65
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   251   2e-65
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   251   2e-65
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   251   3e-65
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   250   4e-65
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   248   3e-64
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   247   4e-64
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   244   2e-63
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   244   2e-63
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   244   3e-63
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten...   244   3e-63
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   244   4e-63
tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   243   7e-63
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   242   1e-62
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   242   1e-62

>tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018440001
           PE=4 SV=1
          Length = 438

 Score =  265 bits (676), Expect = 2e-69
 Identities = 130/178 (73%), Positives = 146/178 (82%)
 Frame = +2

Query: 89  GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 268
           G +VP+SAFLG+ LKK N   T +  S+    V A  D+  QT+KDKW GLA+DTSDDQQ
Sbjct: 25  GASVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGLAFDTSDDQQ 84

Query: 269 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 448
           DI RGKGMVD+LFQ  +  GT +AVMSSYEYISTG R + +DN  DG+YIAPAFMDKLVV
Sbjct: 85  DIVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLVV 144

Query: 449 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           HI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGE
Sbjct: 145 HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGE 202


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  264 bits (674), Expect = 4e-69
 Identities = 130/179 (72%), Positives = 146/179 (81%)
 Frame = +2

Query: 86  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 265
           TG +VP+SAFLG  LKK +  I    +S+    V A  DE KQT KDKW GLA+D SDDQ
Sbjct: 23  TGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQ 82

Query: 266 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 445
           QDITRGKGMVD+LFQ  +  GT +AVMSSY+YISTG R + +DN  DG+YIAPAFMDKLV
Sbjct: 83  QDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLV 142

Query: 446 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGE
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 201


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  262 bits (669), Expect = 1e-68
 Identities = 128/179 (71%), Positives = 147/179 (82%)
 Frame = +2

Query: 86  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 265
           TG +VP+SAF G+ LKK +   T    ++    V A  DE++QT+KD+W GLAYD SDDQ
Sbjct: 23  TGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82

Query: 266 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 445
           QDITRGKGMVD+LFQ  +  GT +AVMSSYEY+STG R + +DN  DG+YIAPAFMDKLV
Sbjct: 83  QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142

Query: 446 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGE
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGE 201


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  262 bits (669), Expect = 1e-68
 Identities = 128/179 (71%), Positives = 147/179 (82%)
 Frame = +2

Query: 86  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 265
           TG +VP+SAF G+ LKK +   T    ++    V A  DE++QT+KD+W GLAYD SDDQ
Sbjct: 23  TGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82

Query: 266 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 445
           QDITRGKGMVD+LFQ  +  GT +AVMSSYEY+STG R + +DN  DG+YIAPAFMDKLV
Sbjct: 83  QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142

Query: 446 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGE
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGE 201


>tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=2
           SV=1
          Length = 373

 Score =  258 bits (660), Expect = 2e-67
 Identities = 127/179 (70%), Positives = 146/179 (81%)
 Frame = +2

Query: 86  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 265
           TG  +P +AF G+ LKK N  +T    +A  +   A +DE KQT KD+W GLA+DTSDDQ
Sbjct: 24  TGGLLPNTAFFGSSLKKMNSRLTNPRIAAGNIKAVADDDEEKQTSKDRWGGLAFDTSDDQ 83

Query: 266 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 445
           QDITRGKGMVD+LFQ  +  GT +AVMSSYEY+STG R + +DN  DG+YIAPAFMDKLV
Sbjct: 84  QDITRGKGMVDSLFQAPMQTGTHYAVMSSYEYLSTGLRQY-LDNNMDGFYIAPAFMDKLV 142

Query: 446 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGE
Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 201


>tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedeschia
           aethiopica GN=rca4 PE=2 SV=1
          Length = 435

 Score =  257 bits (656), Expect = 4e-67
 Identities = 131/180 (72%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
 Frame = +2

Query: 86  TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSDD 262
           +G +V  S FLG  LK  N S+    +S   L V A++ DESKQTK D+WAGL  DTSDD
Sbjct: 20  SGASVTRSGFLGTSLKTVNPSLGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDD 79

Query: 263 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 442
           QQDITRGKGMVD+LFQ  +G GT + V+SSYEYISTG R+F +DN  +G YIAPAFMDKL
Sbjct: 80  QQDITRGKGMVDSLFQAPMGDGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKL 139

Query: 443 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           VVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGE
Sbjct: 140 VVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 199


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  256 bits (653), Expect = 1e-66
 Identities = 130/185 (70%), Positives = 144/185 (77%)
 Frame = +2

Query: 68  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 247
           L  S   G  VP SAF G  LKK           +    V A  DE+KQT+KDKW GLAY
Sbjct: 18  LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77

Query: 248 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 427
           DTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSY+YISTG RT+ ++N  DG+YIAPA
Sbjct: 78  DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136

Query: 428 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 607
           FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196

Query: 608 GNAGE 622
           GNAGE
Sbjct: 197 GNAGE 201


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  256 bits (653), Expect = 1e-66
 Identities = 130/185 (70%), Positives = 144/185 (77%)
 Frame = +2

Query: 68  LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 247
           L  S   G  VP SAF G  LKK           +    V A  DE+KQT+KDKW GLAY
Sbjct: 18  LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77

Query: 248 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 427
           DTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSY+YISTG RT+ ++N  DG+YIAPA
Sbjct: 78  DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136

Query: 428 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 607
           FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196

Query: 608 GNAGE 622
           GNAGE
Sbjct: 197 GNAGE 201


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 363

 Score =  255 bits (651), Expect = 2e-66
 Identities = 122/177 (68%), Positives = 143/177 (80%)
 Frame = +2

Query: 92  QAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQD 271
           + VP++ F G GLKK++ + +   + A    V A  DE KQT KDKW GLA+D SDDQ D
Sbjct: 28  KTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMD 87

Query: 272 ITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVH 451
           I RGKG VD+LFQ  +G GT + VMS+Y+YIST QRT+  DN  DGYYIAP+FMDKL+VH
Sbjct: 88  IRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVH 147

Query: 452 IAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           I+KNFMNLPNIK+PLILGIWGGKGQGKSFQCELVF+KLGINPIMMSAGELESG+AGE
Sbjct: 148 ISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGDAGE 204


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 440

 Score =  255 bits (651), Expect = 2e-66
 Identities = 122/177 (68%), Positives = 143/177 (80%)
 Frame = +2

Query: 92  QAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQD 271
           + VP++ F G GLKK++ + +   + A    V A  DE KQT KDKW GLA+D SDDQ D
Sbjct: 28  KTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMD 87

Query: 272 ITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVH 451
           I RGKG VD+LFQ  +G GT + VMS+Y+YIST QRT+  DN  DGYYIAP+FMDKL+VH
Sbjct: 88  IRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVH 147

Query: 452 IAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 622
           I+KNFMNLPNIK+PLILGIWGGKGQGKSFQCELVF+KLGINPIMMSAGELESG+AGE
Sbjct: 148 ISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGDAGE 204