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NBDC - LSDB Archive
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DK959741
Clone id TST39A01NGRL0005_I08
Library
Length 635
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_I08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGCAGGTGAGTTTGAACGGGCCACTCTTTAGCAGCCCAGCACTTTGAAGGAAGCAGAGAG
AAGGAGAGGGGGCCCGAGAGGGAGAAGCTCGTGTTTGTTTGCAGAAATGGCTGCCATGCA
GGCGACATTGGGCGTTTCCTGCCCTTCTTCGTCTCTATGCAAGTCGTCTTTCTTGGGGAG
CGCCTCTCGTCTTTCTCGGGTGGCCTCTGCTATTGCCCCTTCCCCTGTCCGTGCCTTCAA
GGTCGAGGCAAAGAAAGGCGAATGGCTTCCCGGTCTGGCATCCCCTGCTTACCTAGACGG
AAACCTTGCTGGTGACAATGGCTTCGACCCCCTTGGCTTGGCTGAGGATCCTGCCAACCT
TAAATGGTATGTGTTTGCAGAGCCCCCCCATGGAAGATGGGCAATGCTTGGAGAAAAAAA
GAGGGTGATCCCCGACCTCTTGACAAAGATTGGTATCATCAATGTTCCTGCATGGTATGA
TGCGGGCAAGGTCGAGTACTTCGCCCCCGCCTCCACTCTCTTTGTGATCGAATTCATCTT
GTTCCACTATGTGGAGGGGAGAAGATGGCAAGACATCAAGTACCCTGGCAGTGTGAATGC
CGATCCGTTCAACCCTAAGCTTACTCTGCCCCCTG
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 133
Score (bit) 210.0
E-value 4.0e-54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959741|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_I08, 5'
         (635 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   210   4e-54
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   204   3e-52
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   153   6e-37
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   152   1e-36
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   148   2e-35
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    88   4e-17
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    86   2e-16
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    85   3e-16
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    82   2e-15
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    76   1e-13
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    75   3e-13
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    67   6e-11
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    62   2e-09
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    61   6e-09
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    60   9e-09
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    58   4e-08
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    57   1e-07
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    56   1e-07
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    56   1e-07
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    56   2e-07
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    56   2e-07
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    55   3e-07
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    55   3e-07
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    55   3e-07
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    55   3e-07
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    55   4e-07
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    55   4e-07
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...    54   5e-07
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    54   5e-07
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    54   7e-07

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  210 bits (535), Expect = 4e-54
 Identities = 100/133 (75%), Positives = 112/133 (84%)
 Frame = +2

Query: 233 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAMLG 412
           +FKVEAKKGEWLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+V AE  +GRWAMLG
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 413 EKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIKYPGS 592
               ++P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE RRWQDIK PGS
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGS 166

Query: 593 VNADPFNPKLTLP 631
           VN DP   + +LP
Sbjct: 167 VNQDPIFKQYSLP 179


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  204 bits (519), Expect = 3e-52
 Identities = 98/137 (71%), Positives = 110/137 (80%)
 Frame = +2

Query: 221 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRW 400
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NL+W+V AE  +GRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 401 AMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIK 580
           AMLG    ++P++ T IGIINVP WY AGK EYFA +STLFVIEFIL HYVE RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIK 161

Query: 581 YPGSVNADPFNPKLTLP 631
            PGSVN DP   + +LP
Sbjct: 162 NPGSVNQDPIFKQYSLP 178


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  153 bits (387), Expect = 6e-37
 Identities = 79/150 (52%), Positives = 93/150 (62%), Gaps = 7/150 (4%)
 Frame = +2

Query: 197 RVASAIAPSPVRAFKVEAKKGE-----WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL 361
           RV+  IAP   R+  V A   +     W PG   P +LDG+L GD GFDPLGL  DP +L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 362 KWYVFAEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFIL 541
           KW   AE  H RWAMLG     IP+ LTKIG++N P+WY AG+ EYF   +TLFVIE +L
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 542 FHYVEGRRWQDIKYPGSVNADPF--NPKLT 625
             + EGRRW DI  PG VN DP   N KLT
Sbjct: 161 IGWAEGRRWADIIKPGCVNTDPIFPNNKLT 190


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  152 bits (384), Expect = 1e-36
 Identities = 82/148 (55%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
 Frame = +2

Query: 194 SRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYV 373
           S  AS    S  R   V+AK G WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+V
Sbjct: 14  SPAASGSPRSTRRDVAVQAK-GSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 374 FAEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHY 550
            A+  +GRWAMLG    +IP++LTK G++N P W    GK  YFA +ST   +  +   Y
Sbjct: 73  QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTY 131

Query: 551 VEGRRWQDIKYPGSVNADPFNPKLTLPP 634
           VE RRWQDIK PGSVN DP     +LPP
Sbjct: 132 VEIRRWQDIKNPGSVNQDPIFKSYSLPP 159


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  148 bits (374), Expect = 2e-35
 Identities = 71/123 (57%), Positives = 84/123 (68%), Gaps = 2/123 (1%)
 Frame = +2

Query: 263 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAMLGEKKRVIPDLL 442
           W PG   P +LDG+L GD GFDPLGLA DP +L+W   AE  H RWAMLG     IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 443 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIKYPGSVNADPF--NP 616
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + EGRRW DI  PG VN DP   N 
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNN 187

Query: 617 KLT 625
           KLT
Sbjct: 188 KLT 190


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 60/156 (38%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
 Frame = +2

Query: 188 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL-- 361
           + S V  A +  PV   K  A +  W     S +YLDG L GD GFDPLGL+ DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 362 ----KWYVFAEPPHGRWAMLGEKKRVIPDLLTKIGII---NVPAWYD------AGKVEYF 502
               KW  + E  +GR+AMLG    + P++L K G+I      AW+       AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 503 APASTLFVIEFILFHYVEGRRWQDIKYPGSVNADPF 610
           A   TLFV+E  L  + E RR+QD   PGS+    F
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 185



 Score = 33.1 bits (74), Expect = 1.2
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +2

Query: 266 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAMLGEKKRVIPDLLT 445
           L G   PAY  G L     F+PLG  +D  ++K     E  +GR AML      I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 446 KIG 454
            +G
Sbjct: 247 GVG 249


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 85.9 bits (211), Expect = 2e-16
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
 Frame = +2

Query: 209 AIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWY 370
           A A  PV+   V+  +  W     S +YLDG+L GD GFDPLGL+ DP         +W 
Sbjct: 42  AAATPPVKQGGVD--RPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWL 98

Query: 371 VFAEPPHGRWAMLGEKKRVIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLF 523
            + E  +GR+AMLG    + P+ L K+G+I      AW+       AG   Y+A   TLF
Sbjct: 99  AYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 158

Query: 524 VIEFILFHYVEGRRWQDIKYPGSVNADPF 610
           V+E  L  + E RR+QD   PGS+    F
Sbjct: 159 VLEMALMGFAEHRRFQDWAKPGSMGKQYF 187



 Score = 32.7 bits (73), Expect = 1.6
 Identities = 22/61 (36%), Positives = 29/61 (47%)
 Frame = +2

Query: 272 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAMLGEKKRVIPDLLTKI 451
           G  +PAY  G       F+PLG  +D  +LK     E  +GR AML      I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 452 G 454
           G
Sbjct: 251 G 251


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 85.1 bits (209), Expect = 3e-16
 Identities = 58/150 (38%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
 Frame = +2

Query: 194 SRVASAIAPSPVRAFKVEAKKGEWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPA 355
           +RV  A  P         AKK  W+P       L  P +LDG+L GD GFDPLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 356 NLKWYVFAEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFV 526
            LKWY  AE  HGRWAM       +    + I       W++AG      AP S  TL  
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLG 145

Query: 527 IEFILFHYVEGRRWQDIKYPGSVNADPFNP 616
            + IL  +VE +RW D   P S + +   P
Sbjct: 146 TQLILMGWVESKRWVDFFDPDSQSVEWATP 175


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
 Frame = +2

Query: 248 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAML 409
           A K  W+P +        P +LDG+L GD GFDPLGL +DPA LKWY  AE  HGRWAML
Sbjct: 55  APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

Query: 410 GEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIKYPG 589
                 +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P 
Sbjct: 115 AVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPD 171

Query: 590 SVNADPFNP 616
           S + +   P
Sbjct: 172 SQSVEWATP 180


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
 Frame = +2

Query: 248 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAML 409
           A K  W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY  AE  HGRWAM 
Sbjct: 50  APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 410 GEKKRVIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEGRRWQD 574
                 +    + I       W++AG      AP S  +L   + +L  +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVD 161
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 173
Score (bit) 222.0
E-value 2.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959741|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_I08, 5'
         (635 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   222   2e-56
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   220   5e-56
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   218   2e-55
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   217   5e-55
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   216   1e-54
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   216   1e-54
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   211   2e-53
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   211   3e-53
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   210   5e-53
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   209   9e-53
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   208   2e-52
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   208   3e-52
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   208   3e-52
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   205   2e-51
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   203   8e-51
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   201   2e-50
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   200   5e-50
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   196   8e-49
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   196   8e-49
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   196   8e-49
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   194   3e-48
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   193   8e-48
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   190   5e-47
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   190   7e-47
tr|B6DYZ8|B6DYZ8_LIQST Chloroplast chlorophyll a-b binding prote...   168   3e-40
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   167   4e-40
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   166   8e-40
tr|B6DZ31|B6DZ31_9MAGN Chloroplast chlorophyll a-b binding prote...   166   1e-39
tr|B6DZ26|B6DZ26_9MAGN Chloroplast chlorophyll a-b binding prote...   166   1e-39
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   166   1e-39

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  222 bits (565), Expect = 2e-56
 Identities = 113/173 (65%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
 Frame = +2

Query: 119 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 295
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 296 DGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAW 475
           +G+L GDNGFDPLGLAEDP +LKWYV AE  +GRWAMLG    +IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGLINVPKW 125

Query: 476 YDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIKYPGSVNADPFNPKLTLPP 634
           YDAGKVEYFA +STLFVIEFILFHYVE RRWQDIKYPGSVN DP   + +LPP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPLFKQYSLPP 178


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  220 bits (561), Expect = 5e-56
 Identities = 106/146 (72%), Positives = 121/146 (82%)
 Frame = +2

Query: 197 RVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVF 376
           RV     P+P R+FKVEAK GEWLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYV 
Sbjct: 27  RVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 377 AEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVE 556
           AE  +GRWAMLG    +IP++LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 557 GRRWQDIKYPGSVNADPFNPKLTLPP 634
            RRWQDIKYPGSVN DP   + +LPP
Sbjct: 146 LRRWQDIKYPGSVNQDPLFKQYSLPP 171


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  218 bits (556), Expect = 2e-55
 Identities = 112/173 (64%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
 Frame = +2

Query: 119 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 295
           QATLGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP YL
Sbjct: 7   QATLGVSCRSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPTYL 65

Query: 296 DGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAW 475
           +G+L GDNGFDPLGLAEDP +LKWYV AE  +GRWAMLG    +IP++LT  G I+VP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKW 125

Query: 476 YDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIKYPGSVNADPFNPKLTLPP 634
           YDAGKVEYFA +STLFVIEFILFHYVE RRWQDIKYPGSVN DP     +LPP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPVFKNYSLPP 178


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  217 bits (552), Expect = 5e-55
 Identities = 111/173 (64%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
 Frame = +2

Query: 119 QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 295
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 296 DGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAW 475
           +G+L GDNG DPLGLAEDP +LKWYV AE  +GRWAMLG     IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIPEVLTSIGLINVPKW 125

Query: 476 YDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIKYPGSVNADPFNPKLTLPP 634
           YDAGKVEYFA + TLFVIEFILFHYVE RRWQDIKYPGSVN DP     +LPP
Sbjct: 126 YDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYPGSVNQDPIXKSYSLPP 178


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  216 bits (549), Expect = 1e-54
 Identities = 103/149 (69%), Positives = 117/149 (78%)
 Frame = +2

Query: 188 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKW 367
           +L+R  S    +   +FKVEAKKGEWLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKW
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 368 YVFAEPPHGRWAMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFH 547
           Y+ AE  +GRWAMLG    ++P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 548 YVEGRRWQDIKYPGSVNADPFNPKLTLPP 634
           YVE RRWQDIK PG VN DP     +LPP
Sbjct: 149 YVEIRRWQDIKNPGCVNQDPIFKNYSLPP 177


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  216 bits (549), Expect = 1e-54
 Identities = 102/138 (73%), Positives = 113/138 (81%)
 Frame = +2

Query: 221 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRW 400
           S  R+FKVEAKKGEWLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYV AE  + RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 401 AMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIK 580
           AMLG    ++P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 581 YPGSVNADPFNPKLTLPP 634
            PGSVN DP     +LPP
Sbjct: 162 NPGSVNQDPIFKNYSLPP 179


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  211 bits (538), Expect = 2e-53
 Identities = 101/137 (73%), Positives = 112/137 (81%)
 Frame = +2

Query: 221 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRW 400
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+V AE  +GRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 401 AMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIK 580
           AMLG    ++P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 581 YPGSVNADPFNPKLTLP 631
            PGSVN DP   + +LP
Sbjct: 162 NPGSVNQDPIFKQYSLP 178


>tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=cab1 PE=2 SV=1
          Length = 251

 Score =  211 bits (537), Expect = 3e-53
 Identities = 99/138 (71%), Positives = 112/138 (81%)
 Frame = +2

Query: 221 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRW 400
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGLAEDP NLKW++ AE  +GRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRW 101

Query: 401 AMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIK 580
           AMLG    ++P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 581 YPGSVNADPFNPKLTLPP 634
            PGSVN DP     +LPP
Sbjct: 162 NPGSVNQDPIFKSYSLPP 179


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  210 bits (535), Expect = 5e-53
 Identities = 100/138 (72%), Positives = 113/138 (81%)
 Frame = +2

Query: 221 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRW 400
           S   + KVEAKKGEWLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+V AE  +GRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 401 AMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIK 580
           AMLG    ++P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 581 YPGSVNADPFNPKLTLPP 634
            PGSVN DP   + +LPP
Sbjct: 162 NPGSVNQDPIFKQYSLPP 179


>tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 251

 Score =  209 bits (533), Expect = 9e-53
 Identities = 98/138 (71%), Positives = 111/138 (80%)
 Frame = +2

Query: 221 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVFAEPPHGRW 400
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGL EDP NLKW++ AE  +GRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLVEDPENLKWFIQAELVNGRW 101

Query: 401 AMLGEKKRVIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEGRRWQDIK 580
           AMLG    ++P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 581 YPGSVNADPFNPKLTLPP 634
            PGSVN DP     +LPP
Sbjct: 162 NPGSVNQDPIFKNYSLPP 179