NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959777
Clone id TST39A01NGRL0005_J21
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_J21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGGAAGATGGCTCCCGTTGCGCCAACGTCGCAGCAGTGGGTGGAGAAGTATCGACCTCG
GCAGGTGAAGGACGTGGTGCATCAGGAGGAAGTTGTACTGACCCTCACCAATGCTCTTGA
AACGGGAAATCTTCCGCATCTGCTGTTTTATGGACCCCCTGGCACTGGCAAGACTTCAAC
AGCTCTAGCAATCTCACATCAACTATTTGGGCCAGAGCTCTACAAAACTCGGGTTTTGGA
GCTGAATGCTAGTGATGACCGAGGTATTAATGTTGTTCGGACGAAGATAAAAGATTTTGC
AGCTGTGGCTGTTGGACCTGGTGTAAGTGGTTACCCTTGTCCACCATTCAAGATTATCAT
ATTAGATGAAGCAGACTCCATGACAGAAGATGCACAGAATGCTCTAAGGCGCACTATGGA
AACATACTCCAAAGTCACGCGCTTTTGTTTTATCTGCAATTATGTGAGCAGGATCATTGA
GCCCTTAACATCCAGGTGTGCTAAATTTAGATTTAAGCCTCTTCTTGACAATATGCTGAG
TAGCCGCATCCAATTTATTTGCCGAGAAGAAGGGCTTTCTCTGGACTCAGAGGCTCTGAC
■■Homology search results ■■ -
sp_hit_id P35249
Definition sp|P35249|RFC4_HUMAN Replication factor C subunit 4 OS=Homo sapiens
Align length 188
Score (bit) 244.0
E-value 2.0e-64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959777|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_J21, 5'
         (600 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P35249|RFC4_HUMAN Replication factor C subunit 4 OS=Homo sapi...   244   2e-64
sp|Q09843|RFC2_SCHPO Replication factor C subunit 2 OS=Schizosac...   244   3e-64
sp|Q99J62|RFC4_MOUSE Replication factor C subunit 4 OS=Mus muscu...   242   9e-64
sp|P40348|RFC2_YEAST Replication factor C subunit 2 OS=Saccharom...   240   5e-63
sp|Q54MD4|RFC4_DICDI Probable replication factor C subunit 4 OS=...   239   1e-62
sp|P0C7N7|RFC2_PHANO Replication factor C subunit 2 OS=Phaeospha...   232   1e-60
sp|O28219|RFCS_ARCFU Replication factor C small subunit OS=Archa...   202   8e-52
sp|Q9YBS7|RFCS_AERPE Replication factor C small subunit OS=Aerop...   202   8e-52
sp|Q8ZYK4|RFCS1_PYRAE Replication factor C small subunit 1 OS=Py...   201   2e-51
sp|A1RWU7|RFCS_THEPD Replication factor C small subunit OS=Therm...   201   3e-51
sp|A1RSA2|RFCS1_PYRIL Replication factor C small subunit 1 OS=Py...   199   9e-51
sp|A3MS28|RFCS_PYRCJ Replication factor C small subunit OS=Pyrob...   198   2e-50
sp|A3DNV9|RFCS_STAMF Replication factor C small subunit OS=Staph...   198   2e-50
sp|A4WGV2|RFCS1_PYRAR Replication factor C small subunit 1 OS=Py...   197   3e-50
sp|Q975D3|RFCS_SULTO Replication factor C small subunit OS=Sulfo...   197   4e-50
sp|P53016|RFC4_CAEEL Replication factor C subunit 4 OS=Caenorhab...   195   2e-49
sp|Q54ST4|RFC5_DICDI Probable replication factor C subunit 5 OS=...   192   8e-49
sp|Q8PVY4|RFCS_METMA Replication factor C small subunit OS=Metha...   192   1e-48
sp|Q46C63|RFCS_METBF Replication factor C small subunit OS=Metha...   192   1e-48
sp|P34429|RFC5_CAEEL Probable replication factor C subunit 5 OS=...   191   2e-48
sp|Q8TSX5|RFCS_METAC Replication factor C small subunit OS=Metha...   190   4e-48
sp|A1RV38|RFCS2_PYRIL Replication factor C small subunit 2 OS=Py...   190   4e-48
sp|Q8ZWS2|RFCS2_PYRAE Replication factor C small subunit 2 OS=Py...   189   9e-48
sp|Q9UXF5|RFCS_SULSO Replication factor C small subunit OS=Sulfo...   189   1e-47
sp|P60374|RFCS_NANEQ Replication factor C small subunit OS=Nanoa...   189   1e-47
sp|A4WLY0|RFCS2_PYRAR Replication factor C small subunit 2 OS=Py...   187   3e-47
sp|Q4JAB0|RFCS_SULAC Replication factor C small subunit OS=Sulfo...   184   2e-46
sp|A6VJ61|RFCS_METM7 Replication factor C small subunit OS=Metha...   183   5e-46
sp|Q9D0F6|RFC5_MOUSE Replication factor C subunit 5 OS=Mus muscu...   183   7e-46
sp|O14003|RFC3_SCHPO Replication factor C subunit 3 OS=Schizosac...   182   9e-46

>sp|P35249|RFC4_HUMAN Replication factor C subunit 4 OS=Homo sapiens
           GN=RFC4 PE=1 SV=2
          Length = 363

 Score =  244 bits (623), Expect = 2e-64
 Identities = 122/188 (64%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
 Frame = +2

Query: 38  WVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQLFGPE 217
           WVEKYRP+ V +V  QEEVV  L  +LE  +LP+LLFYGPPGTGKTST LA + +LFGPE
Sbjct: 40  WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPE 99

Query: 218 LYKTRVLELNASDDRGINVVRTKIKDFAAVAV-GPGVSGYPCPPFKIIILDEADSMTEDA 394
           L++ RVLELNASD+RGI VVR K+K+FA + V G    G PCPPFKI+ILDEADSMT  A
Sbjct: 100 LFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAA 159

Query: 395 QNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSRIQFICREEG 574
           Q ALRRTME  SK TRFC ICNYVSRIIEPLTSRC+KFRFKPL D +   R+  I ++E 
Sbjct: 160 QAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKEN 219

Query: 575 LSLDSEAL 598
           + +  E +
Sbjct: 220 VKISDEGI 227


>sp|Q09843|RFC2_SCHPO Replication factor C subunit 2
           OS=Schizosaccharomyces pombe GN=rfc2 PE=1 SV=1
          Length = 340

 Score =  244 bits (622), Expect = 3e-64
 Identities = 115/195 (58%), Positives = 149/195 (76%)
 Frame = +2

Query: 2   RKMAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTST 181
           +K    A  S  WVE YRP+ +  V  QE  V  L   L + NLPH+LFYG PGTGKTST
Sbjct: 9   KKTEQEAKKSIPWVELYRPKTLDQVSSQESTVQVLKKTLLSNNLPHMLFYGSPGTGKTST 68

Query: 182 ALAISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSGYPCPPFKIII 361
            LA+S +LFGP+L K+RVLELNASD+RGI+++R K+K FA   V   V GYPCPPFKIII
Sbjct: 69  ILALSRELFGPQLMKSRVLELNASDERGISIIREKVKSFAKTTVTNKVDGYPCPPFKIII 128

Query: 362 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLS 541
           LDEADSMT+DAQ ALRRTME+Y+++TRFC ICNY++RII+PL+SRC+K+RFKPL +  + 
Sbjct: 129 LDEADSMTQDAQAALRRTMESYARITRFCLICNYMTRIIDPLSSRCSKYRFKPLDNENMV 188

Query: 542 SRIQFICREEGLSLD 586
            R++FI  ++ +S++
Sbjct: 189 KRLEFIAADQAVSME 203


>sp|Q99J62|RFC4_MOUSE Replication factor C subunit 4 OS=Mus musculus
           GN=Rfc4 PE=2 SV=1
          Length = 364

 Score =  242 bits (618), Expect = 9e-64
 Identities = 124/200 (62%), Positives = 149/200 (74%), Gaps = 1/200 (0%)
 Frame = +2

Query: 2   RKMAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTST 181
           +K+ PV      WVEKYRP+ V +V  Q+EVV  L  +LE  +LP+LLFYGPPGTGKTST
Sbjct: 33  KKVKPVP-----WVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTST 87

Query: 182 ALAISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAV-GPGVSGYPCPPFKII 358
            LA + +LFGPEL++ RVLELNASD+RGI VVR K+K+FA + V G    G PCPPFKI+
Sbjct: 88  ILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIV 147

Query: 359 ILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNML 538
           ILDEADSMT  AQ ALRRTME  SK TRFC ICNYVSRIIEPLTSRC+KFRFKPL D + 
Sbjct: 148 ILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQ 207

Query: 539 SSRIQFICREEGLSLDSEAL 598
             R+  I  +E + + +E +
Sbjct: 208 QERLLDIAEKENVKIGNEEI 227


>sp|P40348|RFC2_YEAST Replication factor C subunit 2
           OS=Saccharomyces cerevisiae GN=RFC2 PE=1 SV=1
          Length = 353

 Score =  240 bits (612), Expect = 5e-63
 Identities = 115/193 (59%), Positives = 146/193 (75%), Gaps = 4/193 (2%)
 Frame = +2

Query: 32  QQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQLFG 211
           Q WVEKYRP+ + +V  Q+  V  L   L++ NLPH+LFYGPPGTGKTST LA++ +L+G
Sbjct: 25  QPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYG 84

Query: 212 PELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGP----GVSGYPCPPFKIIILDEADS 379
           P+L K+R+LELNASD+RGI++VR K+K+FA + V       +  YPCPP+KIIILDEADS
Sbjct: 85  PDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADS 144

Query: 380 MTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSRIQFI 559
           MT DAQ+ALRRTMETYS VTRFC ICNYV+RII+PL SRC+KFRFK L  +    R++FI
Sbjct: 145 MTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFI 204

Query: 560 CREEGLSLDSEAL 598
             +E +  D   L
Sbjct: 205 SEQENVKCDDGVL 217


>sp|Q54MD4|RFC4_DICDI Probable replication factor C subunit 4
           OS=Dictyostelium discoideum GN=rfc4 PE=3 SV=1
          Length = 347

 Score =  239 bits (609), Expect = 1e-62
 Identities = 120/188 (63%), Positives = 144/188 (76%), Gaps = 2/188 (1%)
 Frame = +2

Query: 29  SQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQLF 208
           ++ WV KYRP+ V DV +QE+V+  L  +L TGNLPHLLFYGPPGTGKTST LAI+  ++
Sbjct: 9   TEPWVAKYRPKTVDDVSYQEDVISALKKSLNTGNLPHLLFYGPPGTGKTSTILAIAMDIY 68

Query: 209 GPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSG--YPCPPFKIIILDEADSM 382
           GPEL K RVLELNASD+RGI VVRTKIK+FA  AV    +G   P   FK+IILDEADSM
Sbjct: 69  GPELMKQRVLELNASDERGIEVVRTKIKNFAGYAVNKTTTGTSNPGATFKLIILDEADSM 128

Query: 383 TEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSRIQFIC 562
           T DAQ ALRRT+ET SK TRFC +CNY+SRII+PL SRCAKFRFKPL       R++FI 
Sbjct: 129 TTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVATIERLKFIS 188

Query: 563 REEGLSLD 586
           ++EG+  +
Sbjct: 189 QQEGIKCE 196


>sp|P0C7N7|RFC2_PHANO Replication factor C subunit 2
           OS=Phaeosphaeria nodorum GN=RFC2 PE=3 SV=1
          Length = 411

 Score =  232 bits (591), Expect = 1e-60
 Identities = 115/206 (55%), Positives = 148/206 (71%), Gaps = 20/206 (9%)
 Frame = +2

Query: 32  QQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQLFG 211
           Q WVEKYRP+ + +V  Q+  +  L+  L++ NLPH+LFYGPPGTGKTST LA++ QL+G
Sbjct: 33  QPWVEKYRPKTLSEVTAQDNTIQILSRTLQSSNLPHMLFYGPPGTGKTSTILALAKQLYG 92

Query: 212 PELYKTRVLELNASDDRGINVVRTKIKDFA--AVAVGPGVS------------------G 331
           PEL K+RVLELNASD+RGI++VR K+KDFA   ++V P  +                   
Sbjct: 93  PELMKSRVLELNASDERGISIVRQKVKDFARQQLSVAPTYNVMTEDKDGGEAKMVRYRDK 152

Query: 332 YPCPPFKIIILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFR 511
           Y CPPFKII+LDEADSMT+DAQ+ALRRTMETYS++TRFC +CNYV+RII+PL SRC+KFR
Sbjct: 153 YSCPPFKIIVLDEADSMTQDAQSALRRTMETYSRMTRFCLVCNYVTRIIDPLASRCSKFR 212

Query: 512 FKPLLDNMLSSRIQFICREEGLSLDS 589
           FK L       R+  I + E + LD+
Sbjct: 213 FKSLDQGNAVRRVDDIAKLEDVKLDA 238


>sp|O28219|RFCS_ARCFU Replication factor C small subunit
           OS=Archaeoglobus fulgidus GN=rfcS PE=1 SV=1
          Length = 319

 Score =  202 bits (515), Expect = 8e-52
 Identities = 105/187 (56%), Positives = 132/187 (70%)
 Frame = +2

Query: 38  WVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQLFGPE 217
           WVEKYRPR + +VV Q+EV+  L   +E  N+PHLLF GPPGTGKT+TA+A++  LFG E
Sbjct: 7   WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFG-E 65

Query: 218 LYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSGYPCPPFKIIILDEADSMTEDAQ 397
            ++   +E+NASD+RGI+VVR KIK+FA  A   G       PFKII LDEAD++T DAQ
Sbjct: 66  NWRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGA------PFKIIFLDEADALTADAQ 119

Query: 398 NALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSRIQFICREEGL 577
            ALRRTME YSK  RF   CNYVSRIIEP+ SRCA FRFKP+    +  R+  IC +EG+
Sbjct: 120 AALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGV 179

Query: 578 SLDSEAL 598
            +  + L
Sbjct: 180 KITEDGL 186


>sp|Q9YBS7|RFCS_AERPE Replication factor C small subunit
           OS=Aeropyrum pernix GN=rfcS PE=3 SV=3
          Length = 325

 Score =  202 bits (515), Expect = 8e-52
 Identities = 103/187 (55%), Positives = 132/187 (70%)
 Frame = +2

Query: 38  WVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQLFGPE 217
           WVEKYRPR + D+V Q+ VV  L   ++  N+PHLLF GPPGTGKT+ A A++H LFG E
Sbjct: 9   WVEKYRPRSLDDIVDQKHVVERLKQFVKQRNMPHLLFAGPPGTGKTTAAHALAHDLFG-E 67

Query: 218 LYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSGYPCPPFKIIILDEADSMTEDAQ 397
            Y+  +LELNASD+RGINV+R K+K+FA     P +      PFKI++LDEAD+MT DAQ
Sbjct: 68  NYRQYMLELNASDERGINVIREKVKEFARSRTPPEI------PFKIVLLDEADNMTSDAQ 121

Query: 398 NALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSRIQFICREEGL 577
            ALRR ME YS VTRF  I NY S+II+P+ SRCA FRF+PL    +  R+++I   EG+
Sbjct: 122 QALRRLMELYSSVTRFILIANYPSKIIDPIQSRCAFFRFQPLSKQDVIERLRYIAENEGV 181

Query: 578 SLDSEAL 598
             + EAL
Sbjct: 182 DYEEEAL 188


>sp|Q8ZYK4|RFCS1_PYRAE Replication factor C small subunit 1
           OS=Pyrobaculum aerophilum GN=rfcS1 PE=3 SV=1
          Length = 329

 Score =  201 bits (511), Expect = 2e-51
 Identities = 100/188 (53%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
 Frame = +2

Query: 38  WVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQLFGPE 217
           W EKYRPR   +VV  EEV   L   ++ GN+PHLLFYGPPGTGKT+ AL ++ +L+G E
Sbjct: 6   WFEKYRPRSFDEVVDLEEVKARLREFVKAGNMPHLLFYGPPGTGKTTMALVLARELYG-E 64

Query: 218 LYKTRVLELNASDDRGINVVRTKIKDFAAVA-VGPGVSGYPCPPFKIIILDEADSMTEDA 394
            ++   LELNASD+RGINV+R ++K+FA  A VG         PFK++ILDEAD+MT DA
Sbjct: 65  YWRENTLELNASDERGINVIRERVKEFARTAPVGKA-------PFKLVILDEADNMTSDA 117

Query: 395 QNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSRIQFICREEG 574
           Q ALRR ME Y++ TRF  + NYVSRII+P+ SRCA FRF P+  ++++ R++FI + EG
Sbjct: 118 QQALRRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRSLMAERLKFIAKNEG 177

Query: 575 LSLDSEAL 598
           + L  +A+
Sbjct: 178 VELREDAI 185


>sp|A1RWU7|RFCS_THEPD Replication factor C small subunit
           OS=Thermofilum pendens (strain Hrk 5) GN=rfcS PE=3 SV=1
          Length = 325

 Score =  201 bits (510), Expect = 3e-51
 Identities = 101/191 (52%), Positives = 138/191 (72%)
 Frame = +2

Query: 26  TSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTALAISHQL 205
           + + WVEKYRPR + ++V QEE+V  L   ++  N+PHLLF GPPGTGKT+ ALA++H L
Sbjct: 2   SEELWVEKYRPRSLDEIVDQEEIVKRLKEFVKNKNMPHLLFAGPPGTGKTTAALALAHDL 61

Query: 206 FGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSGYPCPPFKIIILDEADSMT 385
           +G E ++   LELNASD+RGI+V+R++IKD+A       V      PFK++ILDEAD+MT
Sbjct: 62  YG-ESWRDNTLELNASDERGIDVIRSRIKDYARTLPIGDV------PFKLVILDEADNMT 114

Query: 386 EDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSRIQFICR 565
            DAQ ALRRTME +S+ TRF  I NY S+IIEP+ SRCA FRF+PL       R+++I +
Sbjct: 115 GDAQQALRRTMELFSRNTRFILIANYASKIIEPIQSRCAVFRFQPLPKGDAFQRLRWIAQ 174

Query: 566 EEGLSLDSEAL 598
           +EG+++D  AL
Sbjct: 175 QEGITVDDGAL 185
tr_hit_id A9SMZ4
Definition tr|A9SMZ4|A9SMZ4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 197
Score (bit) 357.0
E-value 2.0e-97
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959777|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_J21, 5'
         (600 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SMZ4|A9SMZ4_PHYPA Predicted protein OS=Physcomitrella paten...   357   2e-97
tr|A9NSN9|A9NSN9_PICSI Putative uncharacterized protein OS=Picea...   334   2e-90
tr|A7NVH0|A7NVH0_VITVI Chromosome chr18 scaffold_1, whole genome...   330   4e-89
tr|B7FK39|B7FK39_MEDTR Putative uncharacterized protein OS=Medic...   329   8e-89
tr|A5BRZ3|A5BRZ3_VITVI Putative uncharacterized protein OS=Vitis...   328   1e-88
tr|Q9XI09|Q9XI09_ARATH F8K7.11 protein OS=Arabidopsis thaliana G...   327   3e-88
tr|Q93ZX1|Q93ZX1_ARATH Putative replication factor (At1g21690) (...   327   3e-88
tr|Q9FXM3|Q9FXM3_ORYSJ cDNA clone:J033138A02, full insert sequen...   327   4e-88
tr|Q0IPQ0|Q0IPQ0_ORYSJ Os12g0176500 protein (Fragment) OS=Oryza ...   327   4e-88
tr|A2ZIL4|A2ZIL4_ORYSI Putative uncharacterized protein OS=Oryza...   327   4e-88
tr|B6T4T0|B6T4T0_MAIZE Replication factor C subunit 2 OS=Zea may...   320   4e-86
tr|B4FQT5|B4FQT5_MAIZE Putative uncharacterized protein OS=Zea m...   320   4e-86
tr|Q3ED76|Q3ED76_ARATH Uncharacterized protein At1g21690.2 OS=Ar...   307   3e-82
tr|A8HYL2|A8HYL2_CHLRE DNA replication factor C complex subunit ...   290   4e-77
tr|A4S2B7|A4S2B7_OSTLU Predicted protein OS=Ostreococcus lucimar...   261   2e-68
tr|Q012B7|Q012B7_OSTTA Replication factor C 37 kDa subunit (ISS)...   259   6e-68
tr|A4RN27|A4RN27_MAGGR Putative uncharacterized protein OS=Magna...   254   2e-66
tr|Q5KCE8|Q5KCE8_CRYNE Activator 1 41 kDa subunit, putative OS=C...   253   8e-66
tr|Q28GP1|Q28GP1_XENTR Replication factor C (Activator 1) 4, 37k...   250   4e-65
tr|Q7SH42|Q7SH42_NEUCR Activator 1 41 kDa subunit OS=Neurospora ...   249   1e-64
tr|Q6MUX7|Q6MUX7_NEUCR Probable replication factor protein OS=Ne...   249   1e-64
tr|Q76LD2|Q76LD2_XENLA Replication factor C p37 subunit (RFC2 pr...   248   1e-64
tr|B3RUC9|B3RUC9_TRIAD Putative uncharacterized protein OS=Trich...   248   2e-64
tr|Q4PI47|Q4PI47_USTMA Putative uncharacterized protein OS=Ustil...   248   2e-64
tr|Q2HAD0|Q2HAD0_CHAGB Putative uncharacterized protein OS=Chaet...   247   3e-64
tr|Q753A2|Q753A2_ASHGO AFR422Wp OS=Ashbya gossypii GN=AFR422W PE...   247   4e-64
tr|B8MSC7|B8MSC7_9EURO DNA replication factor C subunit Rfc2, pu...   247   4e-64
tr|Q6CV85|Q6CV85_KLULA KLLA0B13992p OS=Kluyveromyces lactis GN=K...   246   6e-64
tr|A3LWJ5|A3LWJ5_PICST Replication factor C, subunit RFC4 OS=Pic...   246   6e-64
tr|A5E7K0|A5E7K0_LODEL Activator 1 41 kDa subunit OS=Lodderomyce...   245   1e-63

>tr|A9SMZ4|A9SMZ4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_186629 PE=4 SV=1
          Length = 338

 Score =  357 bits (917), Expect = 2e-97
 Identities = 172/197 (87%), Positives = 184/197 (93%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAPV  ++QQWVEKYRPR+VKDV HQEEVV TLTN LETGNLPHLLFYGPPGTGKT+TAL
Sbjct: 1   MAPVMQSTQQWVEKYRPRKVKDVAHQEEVVRTLTNTLETGNLPHLLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGVSGYPCPPFKIIILD 367
           AI HQLFGPELYKTRVLELNASDDRGINVVRTKIKDFA VAVG GVSGYPCPPFK++ILD
Sbjct: 61  AICHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAGVAVGAGVSGYPCPPFKVLILD 120

Query: 368 EADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSSR 547
           EADSMTEDAQNALRRTME YSKVTRFCFICNYVSRIIEPL SRCAKFRFKPLL+N++ +R
Sbjct: 121 EADSMTEDAQNALRRTMENYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLLENVMQNR 180

Query: 548 IQFICREEGLSLDSEAL 598
           IQ+IC+EEGL LD EAL
Sbjct: 181 IQYICQEEGLKLDQEAL 197


>tr|A9NSN9|A9NSN9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 339

 Score =  334 bits (857), Expect = 2e-90
 Identities = 167/199 (83%), Positives = 182/199 (91%), Gaps = 2/199 (1%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAP+  +SQQWVEKYRP+QVKDV HQEEVV  LTN LETGNLPHLLFYGPPGTGKT+TAL
Sbjct: 1   MAPIHSSSQQWVEKYRPKQVKDVAHQEEVVRALTNTLETGNLPHLLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPGV--SGYPCPPFKIII 361
           AI+HQLFGPE YK+RVLELNASDDRGINVVRTKIKDFAAVAVG G   SGY CPPFKIII
Sbjct: 61  AIAHQLFGPE-YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGNTNSGYLCPPFKIII 119

Query: 362 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLS 541
           LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPL SRCAKFRFKPL++++++
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLVEDIMT 179

Query: 542 SRIQFICREEGLSLDSEAL 598
            RI  IC+EEG+ LDS+AL
Sbjct: 180 GRILHICKEEGVHLDSDAL 198


>tr|A7NVH0|A7NVH0_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015431001
           PE=4 SV=1
          Length = 341

 Score =  330 bits (846), Expect = 4e-89
 Identities = 164/199 (82%), Positives = 178/199 (89%), Gaps = 2/199 (1%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAPV  +SQ WVEKYRP+QVKDV HQ+EVV  LTN LET N PH+LFYGPPGTGKT+TAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG--VSGYPCPPFKIII 361
           AI+HQLFGPELYK+RVLELNASDDRGINVVRTKIKDFAAVAVG G    GYPCPP+KIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120

Query: 362 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLS 541
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 542 SRIQFICREEGLSLDSEAL 598
           SRI  IC+EE L+LDSEAL
Sbjct: 181 SRILHICKEEELNLDSEAL 199


>tr|B7FK39|B7FK39_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 339

 Score =  329 bits (843), Expect = 8e-89
 Identities = 159/199 (79%), Positives = 179/199 (89%), Gaps = 2/199 (1%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAP+  ++Q WVEKYRP+QVKDV HQEEVV  LTN LETG+ PH+LFYGPPGTGKT+TAL
Sbjct: 1   MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG--VSGYPCPPFKIII 361
           AI+HQLFGPELYK+RVLELNASDDRGINVVRTKIKDFAAVAVG     +GYPCPP+KII+
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIV 120

Query: 362 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLS 541
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180

Query: 542 SRIQFICREEGLSLDSEAL 598
           SRI +IC+EEG+ LD+E L
Sbjct: 181 SRIVYICKEEGIYLDAEGL 199


>tr|A5BRZ3|A5BRZ3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_019805 PE=4 SV=1
          Length = 341

 Score =  328 bits (841), Expect = 1e-88
 Identities = 163/199 (81%), Positives = 177/199 (88%), Gaps = 2/199 (1%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAPV  +SQ WVEKYRP+QVKDV HQ+EVV  LTN LET N PH+LFYGPPGTGKT+TAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG--VSGYPCPPFKIII 361
           AI+HQLFGPELYK+RVLELNASDDRGINVVRTKIKDFA VAVG G    GYPCPP+KIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120

Query: 362 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLS 541
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 542 SRIQFICREEGLSLDSEAL 598
           SRI  IC+EE L+LDSEAL
Sbjct: 181 SRILHICKEEELNLDSEAL 199


>tr|Q9XI09|Q9XI09_ARATH F8K7.11 protein OS=Arabidopsis thaliana
           GN=F8K7.11 PE=4 SV=1
          Length = 319

 Score =  327 bits (838), Expect = 3e-88
 Identities = 163/199 (81%), Positives = 176/199 (88%), Gaps = 2/199 (1%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAPV  +SQ WVEKYRP+QVKDV HQEEVV  LTN L+T + PH+LFYGPPGTGKT+TAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG--VSGYPCPPFKIII 361
           AI+HQLFGPELYK+RVLELNASDDRGINVVRTKIKDFAAVAVG     SGYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 362 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLS 541
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 542 SRIQFICREEGLSLDSEAL 598
           +RI  IC EEGLSLD EAL
Sbjct: 181 NRILHICNEEGLSLDGEAL 199


>tr|Q93ZX1|Q93ZX1_ARATH Putative replication factor (At1g21690)
           (Similar replication factor C, 37-kDa subunit)
           OS=Arabidopsis thaliana GN=At1g21690/F8K7.11 PE=2 SV=1
          Length = 339

 Score =  327 bits (838), Expect = 3e-88
 Identities = 163/199 (81%), Positives = 176/199 (88%), Gaps = 2/199 (1%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAPV  +SQ WVEKYRP+QVKDV HQEEVV  LTN L+T + PH+LFYGPPGTGKT+TAL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG--VSGYPCPPFKIII 361
           AI+HQLFGPELYK+RVLELNASDDRGINVVRTKIKDFAAVAVG     SGYPCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 362 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLS 541
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 542 SRIQFICREEGLSLDSEAL 598
           +RI  IC EEGLSLD EAL
Sbjct: 181 NRILHICNEEGLSLDGEAL 199


>tr|Q9FXM3|Q9FXM3_ORYSJ cDNA clone:J033138A02, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OsRFC2 PE=2 SV=1
          Length = 339

 Score =  327 bits (837), Expect = 4e-88
 Identities = 160/198 (80%), Positives = 178/198 (89%), Gaps = 1/198 (0%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAP+ P+SQ WVEKYRPRQVKDV HQEEVV  LT  L+T +LPH+LFYGPPGTGKT+TAL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG-VSGYPCPPFKIIIL 364
           AI++QL+GPELYK+RVLELNASDDRGINVVRTKIKDFAAVAVG     GYPCPP+KIIIL
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL 120

Query: 365 DEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSS 544
           DEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S+
Sbjct: 121 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSN 180

Query: 545 RIQFICREEGLSLDSEAL 598
           RI  IC EEGLSLD++AL
Sbjct: 181 RILHICNEEGLSLDAQAL 198


>tr|Q0IPQ0|Q0IPQ0_ORYSJ Os12g0176500 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os12g0176500 PE=4 SV=1
          Length = 379

 Score =  327 bits (837), Expect = 4e-88
 Identities = 160/198 (80%), Positives = 178/198 (89%), Gaps = 1/198 (0%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAP+ P+SQ WVEKYRPRQVKDV HQEEVV  LT  L+T +LPH+LFYGPPGTGKT+TAL
Sbjct: 41  MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 100

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG-VSGYPCPPFKIIIL 364
           AI++QL+GPELYK+RVLELNASDDRGINVVRTKIKDFAAVAVG     GYPCPP+KIIIL
Sbjct: 101 AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL 160

Query: 365 DEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSS 544
           DEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S+
Sbjct: 161 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSN 220

Query: 545 RIQFICREEGLSLDSEAL 598
           RI  IC EEGLSLD++AL
Sbjct: 221 RILHICNEEGLSLDAQAL 238


>tr|A2ZIL4|A2ZIL4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37665 PE=4 SV=1
          Length = 339

 Score =  327 bits (837), Expect = 4e-88
 Identities = 160/198 (80%), Positives = 178/198 (89%), Gaps = 1/198 (0%)
 Frame = +2

Query: 8   MAPVAPTSQQWVEKYRPRQVKDVVHQEEVVLTLTNALETGNLPHLLFYGPPGTGKTSTAL 187
           MAP+ P+SQ WVEKYRPRQVKDV HQEEVV  LT  L+T +LPH+LFYGPPGTGKT+TAL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 188 AISHQLFGPELYKTRVLELNASDDRGINVVRTKIKDFAAVAVGPG-VSGYPCPPFKIIIL 364
           AI++QL+GPELYK+RVLELNASDDRGINVVRTKIKDFAAVAVG     GYPCPP+KIIIL
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL 120

Query: 365 DEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLTSRCAKFRFKPLLDNMLSS 544
           DEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL + ++S+
Sbjct: 121 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSN 180

Query: 545 RIQFICREEGLSLDSEAL 598
           RI  IC EEGLSLD++AL
Sbjct: 181 RILHICNEEGLSLDAQAL 198