DK959804
Clone id TST39A01NGRL0005_L01
Library
Length 667
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_L01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TTTGTACTTGAAGTGACAATCGCCCACTTTCCCTCGCTCTTACAAGAATTGGGTTCTTGC
CCAGTTTCATTCTCTAGCTGCATGGAGGGCTGGATTCACACGTACAGAGTGCGGTTTCCG
TCAGCATTTCTTCTGAAGGCTTGAGCACATTTGGGTTCCCATCTCTGTCGAATTTGGATA
ATTTTTGTGATCTCGGACTCACATGGTCGTTCTTTAGCTGCTCTAAGCCAGGACCTTCAA
GCTCAGCTTCATTATACTTTTGGGCCTACTTCACTAATGAGAGCTGGTCTTTAATTGAAA
GACATAAGCTTGCTTTTGCTTCAGGCAAAAGTTCTCAATGAACTGGTCACTTTCCATCAC
GAGAAGGGAGGACTGGTGGTCTTCGGGTGGCACCAATGGCTGGGCCACTTGTATTGTCAT
GGGTTTTCTGTTTGGGCTTTATGCTATGCGTTCCTTGATGTGGCCATTCCTAAAACGTTA
TTTGGGGAGGAGCTCGTCCAACCTCTCCTTGACGAGTAGCGAATGCGCTTCTGATGTCTC
TAGTGGTGGTCTCCCCATTATTACTGAAGCTGACTTGCAAAGGTTACTGATGCTGTTGGA
TGAAGAGGGGCATTCATGTGGAACTCCGTGGATACCTGTGGTTGATAAATACAGTGATAC
CCTATCA
■■Homology search results ■■ -
sp_hit_id Q5K9L9
Definition sp|Q5K9L9|ATG4_CRYNE Cysteine protease ATG4 OS=Cryptococcus neoformans
Align length 88
Score (bit) 32.7
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959804|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_L01, 5'
(648 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5K9L9|ATG4_CRYNE Cysteine protease ATG4 OS=Cryptococcus neof... 33 1.7
sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens GN... 32 2.2
sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=... 31 4.9
sp|Q08A71|ANM6_ARATH Probable protein arginine N-methyltransfera... 30 8.4

>sp|Q5K9L9|ATG4_CRYNE Cysteine protease ATG4 OS=Cryptococcus
neoformans GN=ATG4 PE=3 SV=1
Length = 1193

Score = 32.7 bits (73), Expect = 1.7
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Frame = -1

Query: 558 QVSFSNNGETTTRDIRSAFATRQGEVGRAPPQITF*E-------------WPHQGTHSIK 418
Q S ++ TT+R I SAF + R P+ +F + WP SI+
Sbjct: 169 QSSSTSTDSTTSRSITSAFTRQNSIQSRRSPRTSFGQAHSRRASQDSQMSWP--APRSIR 226

Query: 417 PKQKTHDNTSGPAIGATRRPPVLPSRDG 334
+HD +S P A+ +P R G
Sbjct: 227 SSTTSHDPSSDPQNSASSTGVPIPQRQG 254


>sp|Q92610|ZN592_HUMAN Zinc finger protein 592 OS=Homo sapiens
GN=ZNF592 PE=1 SV=2
Length = 1267

Score = 32.3 bits (72), Expect = 2.2
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = -1

Query: 351 LPSRDGK*PVH*ELLPEAKASLCLSIKDQLSLVK*AQKYNEAELEGPGLEQLKNDHVSPR 172
+P R P H +L A + L K S+ K Q + +L GP E K P+
Sbjct: 268 VPPRQRLKPAHSKLSSCVAALVALQAKRVASVTKEDQPGHTKDLSGPTKESSKGSPKMPK 327

Query: 171 SQKLSKFDRDGNPNVLKPSEEMLTETALCTCESS 70
S K + + +KPS+ + ++C+ SS
Sbjct: 328 SPKSPRSPLEATRKSIKPSD---SPRSICSDSSS 358


>sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos
taurus GN=SRD5A1 PE=2 SV=1
Length = 257

Score = 31.2 bits (69), Expect = 4.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1

Query: 376 NGWATCIVMGFLFGLYAMRSLMWPFLKR 459
N W CI++ YA RSL++PFL R
Sbjct: 78 NRWPNCILLAMFLVHYAQRSLVFPFLIR 105


>sp|Q08A71|ANM6_ARATH Probable protein arginine N-methyltransferase
6 OS=Arabidopsis thaliana GN=PRMT6 PE=2 SV=1
Length = 435

Score = 30.4 bits (67), Expect = 8.4
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -1

Query: 237 YNEAELE---GPGLEQLKNDHVSPRSQKLSKFDRDGNPNVLKPSEEMLTETALCTCESSP 67
+ E ELE GP L RS ++ R G NVL+ S+++ +L T ESSP
Sbjct: 16 HRELELEDKQGPSLSSF--GRAKKRSHAGARDPRGGLANVLRVSDQLGEHKSLETSESSP 73

Query: 66 P 64
P
Sbjct: 74 P 74


tr_hit_id A7P8V4
Definition tr|A7P8V4|A7P8V4_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera
Align length 30
Score (bit) 35.4
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK959804|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_L01, 5'
(648 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P8V4|A7P8V4_VITVI Chromosome chr3 scaffold_8, whole genome ... 35 3.0
tr|Q0CVG4|Q0CVG4_ASPTN Putative uncharacterized protein OS=Asper... 34 6.7
tr|A9V6S8|A9V6S8_MONBE Predicted protein OS=Monosiga brevicollis... 34 8.8

>tr|A7P8V4|A7P8V4_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036322001
PE=4 SV=1
Length = 116

Score = 35.4 bits (80), Expect = 3.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3

Query: 402 GFSVWALCYAFLDVAIPKTLFGEELVQPLL 491
GF VW LCY+ LD LFG+EL L+
Sbjct: 56 GFKVWGLCYSVLDYRYSSFLFGQELALRLI 85


>tr|Q0CVG4|Q0CVG4_ASPTN Putative uncharacterized protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_02320
PE=4 SV=1
Length = 773

Score = 34.3 bits (77), Expect = 6.7
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -1

Query: 531 TTTRDIRSAFATRQGEVGRAPPQITF*EWPHQGTHSIKPKQKTHDNTSGPAIGATRRPPV 352
+T +RS ++R G V R PP P T + T NT GP+ G + P
Sbjct: 479 STRGSVRSQASSRPGSVMRGPPP------PRSATKTPTAAGSTKYNTIGPSRGGAKSPTK 532

Query: 351 LPSR 340
+P+R
Sbjct: 533 IPAR 536


>tr|A9V6S8|A9V6S8_MONBE Predicted protein OS=Monosiga brevicollis
GN=33646 PE=4 SV=1
Length = 1552

Score = 33.9 bits (76), Expect = 8.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1

Query: 435 GTHSIKPKQKTHDNTSGPAIGATRRPPVLPSRD 337
G S+ P++ T DNT+ P + + RPP LP+ D
Sbjct: 1042 GPASLPPRRGTVDNTAPPPVPVSNRPPPLPTSD 1074