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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959810
Clone id TST39A01NGRL0005_L07
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_L07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTTTCTTCAAGCACCTTCGCCGGC
CAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAGGTAGGCAATGTGGGCGAGGCC
CGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACAGCCCCTGGTATGGCCCCGAC
CGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCAGCTATCTCAAGGGAGAATTT
CCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCTGAGACCTTCGCCAAG
AACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGGGAGCCCTGGGCTGCGTG
ACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCT
GGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCAACCCCAGCCTCGTCCAC
GCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTCTCATGGGCGCTGTTGAGGGA
TACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATCCCATCTA
■■Homology search results ■■ -
sp_hit_id P20866
Definition sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens
Align length 179
Score (bit) 304.0
E-value 2.0e-82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959810|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_L07, 5'
         (587 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   304   2e-82
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   304   2e-82
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   302   7e-82
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   301   2e-81
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   300   3e-81
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   300   4e-81
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   300   5e-81
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   300   5e-81
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   299   6e-81
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   299   8e-81
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   299   8e-81
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   298   1e-80
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   298   1e-80
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   298   2e-80
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   298   2e-80
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   296   4e-80
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   296   5e-80
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   296   5e-80
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   296   5e-80
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   296   5e-80
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   296   5e-80
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   296   7e-80
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   296   7e-80
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   295   9e-80
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   295   9e-80
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   294   2e-79
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   294   3e-79
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   293   3e-79
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   293   4e-79
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   292   1e-78

>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  304 bits (779), Expect = 2e-82
 Identities = 151/179 (84%), Positives = 165/179 (92%), Gaps = 3/179 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 228
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 229 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 408
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 409 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPI
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPI 191



 Score = 30.8 bits (68), Expect = 5.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 238 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 387
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  304 bits (779), Expect = 2e-82
 Identities = 143/167 (85%), Positives = 155/167 (92%), Gaps = 4/167 (2%)
 Frame = +1

Query: 97  KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 264
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 265 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 444
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 445 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPL 185


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  302 bits (774), Expect = 7e-82
 Identities = 145/160 (90%), Positives = 151/160 (94%), Gaps = 2/160 (1%)
 Frame = +1

Query: 112 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 285
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 286 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 465
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 466 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPL 188


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  301 bits (770), Expect = 2e-81
 Identities = 151/172 (87%), Positives = 154/172 (89%), Gaps = 1/172 (0%)
 Frame = +1

Query: 73  KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 249
           KP +ELS KVG  GEARV M    SK+ S S WYG DR  YLGPFSG  PSYL GEFPGD
Sbjct: 18  KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 250 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 429
           YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 430 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 188


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  300 bits (769), Expect = 3e-81
 Identities = 142/163 (87%), Positives = 150/163 (92%), Gaps = 4/163 (2%)
 Frame = +1

Query: 109 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 276
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 277 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 456
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 457 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPL 190


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  300 bits (768), Expect = 4e-81
 Identities = 147/179 (82%), Positives = 158/179 (88%), Gaps = 3/179 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 228
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 229 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 408
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 409 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPL 188


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  300 bits (767), Expect = 5e-81
 Identities = 143/162 (88%), Positives = 151/162 (93%), Gaps = 4/162 (2%)
 Frame = +1

Query: 112 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 279
           G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 280 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 459
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 460 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL 190


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  300 bits (767), Expect = 5e-81
 Identities = 147/172 (85%), Positives = 155/172 (90%), Gaps = 4/172 (2%)
 Frame = +1

Query: 82  SELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 249
           S  SS+V   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 20  SPSSSEV--TGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 77

Query: 250 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 429
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 78  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137

Query: 430 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 138 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL 189


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  299 bits (766), Expect = 6e-81
 Identities = 143/162 (88%), Positives = 150/162 (92%), Gaps = 4/162 (2%)
 Frame = +1

Query: 112 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 279
           G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 280 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 459
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 460 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPL 190


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  299 bits (765), Expect = 8e-81
 Identities = 142/162 (87%), Positives = 150/162 (92%), Gaps = 4/162 (2%)
 Frame = +1

Query: 112 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 279
           G  RV+MRKT +K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 280 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 459
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 460 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPL 190
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 176
Score (bit) 315.0
E-value 9.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959810|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_L07, 5'
         (587 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   315   9e-85
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   311   2e-83
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   311   2e-83
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   311   2e-83
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   310   3e-83
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   310   4e-83
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   307   2e-82
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   307   2e-82
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   306   4e-82
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   305   1e-81
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   304   2e-81
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   304   2e-81
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   304   3e-81
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   304   3e-81
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   303   5e-81
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   303   5e-81
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   303   5e-81
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   303   6e-81
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   303   6e-81
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   301   1e-80
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   301   2e-80
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   301   2e-80
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   301   2e-80
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   301   2e-80
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   301   2e-80
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   300   3e-80
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   300   3e-80
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   300   4e-80
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   300   5e-80
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   300   5e-80

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  315 bits (808), Expect = 9e-85
 Identities = 154/176 (87%), Positives = 163/176 (92%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 237
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 238 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 417
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 418 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPI
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPI 188


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  311 bits (797), Expect = 2e-83
 Identities = 154/178 (86%), Positives = 164/178 (92%), Gaps = 2/178 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 231
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 232 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 411
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 412 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPI
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPI 191


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  311 bits (797), Expect = 2e-83
 Identities = 154/178 (86%), Positives = 164/178 (92%), Gaps = 2/178 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 231
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 232 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 411
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 412 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPI
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPI 191


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  311 bits (796), Expect = 2e-83
 Identities = 152/181 (83%), Positives = 163/181 (90%), Gaps = 5/181 (2%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 222
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 223 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 402
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 403 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 582
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 583 I 585
           I
Sbjct: 193 I 193


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  310 bits (795), Expect = 3e-83
 Identities = 153/178 (85%), Positives = 164/178 (92%), Gaps = 2/178 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 231
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 232 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 411
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 412 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPI 190


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  310 bits (794), Expect = 4e-83
 Identities = 152/178 (85%), Positives = 165/178 (92%), Gaps = 2/178 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 231
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 232 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 411
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 412 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPI 190


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  307 bits (787), Expect = 2e-82
 Identities = 151/178 (84%), Positives = 164/178 (92%), Gaps = 2/178 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 231
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 232 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 411
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 412 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPI 190


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  307 bits (787), Expect = 2e-82
 Identities = 153/178 (85%), Positives = 163/178 (91%), Gaps = 2/178 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 231
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 232 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 411
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 412 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPI 190


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  306 bits (785), Expect = 4e-82
 Identities = 148/178 (83%), Positives = 166/178 (93%), Gaps = 2/178 (1%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 231
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 232 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 411
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 412 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPI
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPI 190


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  305 bits (781), Expect = 1e-81
 Identities = 151/176 (85%), Positives = 159/176 (90%)
 Frame = +1

Query: 58  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 237
           GQ++ KP +ELS KVG   EARVSMRK  S  SDS WYG DR K+LGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGT-SEARVSMRK--SSGSDSIWYGADRPKFLGPFSGETPSYLNGE 70

Query: 238 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 417
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 71  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 130

Query: 418 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 585
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPI
Sbjct: 131 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPI 186