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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959856
Clone id TST39A01NGRL0005_N05
Library
Length 577
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_N05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ACACAATATACTGTCAACAATCAGATGGTGAATGCAACCCTCATGAACATTGCTGACAAT
CCTACCAATGTCCAGCTGCCTGGTGTGTACATTAAGGAGGAGCTCCCACGCGTGCCCATC
ATCGTAACTGGAAATGACTTCTCCACACTGTATGCACCCTTGATCCGAGATGGTCGTATG
GAGAAATTCTACTGGGCGCCCACAAGAGAAGATAGAATTGGAGTTTGCTTGGGTATCTTC
CGTCATGATAACGTGAAAGACGATGACATTACAAAGATTGTTGATACATTCCCTGGCCAA
TCTATTGATTTCTTTGGTGCTCTGCGGGCACGAGTTTATGATGACCTTGTCAGGAAGTGG
GTGGGTGAAGTGGGAGTTGAGAGCATGGGGAAGATGCTTGTGAACTCAAGGGAAGGCCCT
CCGTCATTCGTGAAGCCTGCCATGACTGTGGATAAGTTGATGGAGTATGGGCACATGTTA
GTAATGGAGCAGGAGAATGTGAAGAGAGTTCAATTGGCAGACAAGTACCTCAAAGAAGCG
GCCCTTGGTGATGCCAATGAAGATGATGCAATCAAGC
■■Homology search results ■■ -
sp_hit_id Q7X9A0
Definition sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata
Align length 192
Score (bit) 330.0
E-value 2.0e-90
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959856|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_N05, 5'
         (577 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   330   2e-90
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   330   4e-90
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   329   5e-90
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   329   5e-90
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   327   3e-89
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   320   2e-87
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   319   6e-87
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   318   2e-86
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   315   8e-86
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   312   7e-85
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   312   9e-85
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   312   9e-85
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   308   1e-83
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   305   1e-82
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   290   5e-78
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   268   2e-71
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...   223   4e-58
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...   216   5e-56
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...    74   4e-13
sp|P84562|RCA_POPEU Ribulose bisphosphate carboxylase/oxygenase ...    47   9e-05
sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2...    35   0.35 
sp|Q8G3W7|SYS_BIFLO Seryl-tRNA synthetase OS=Bifidobacterium lon...    33   0.79 
sp|Q6V4S5|SDK2_MOUSE Protein sidekick-2 OS=Mus musculus GN=Sdk2 ...    33   0.79 
sp|A1A0B7|SYS_BIFAA Seryl-tRNA synthetase OS=Bifidobacterium ado...    33   1.0  
sp|P09662|C10AA_BACTI Pesticidal crystal protein cry10Aa OS=Baci...    32   1.8  
sp|Q9BYV9|BACH2_HUMAN Transcription regulator protein BACH2 OS=H...    32   2.3  
sp|P15257|HNF1A_RAT Hepatocyte nuclear factor 1-alpha OS=Rattus ...    32   3.0  
sp|Q72A64|Y2133_DESVH UPF0324 membrane protein DVU_2133 OS=Desul...    31   3.9  
sp|P0C7B0|VMH6_AGKHB Zinc metalloproteinase-disintegrin brevilys...    31   5.1  
sp|P22361|HNF1A_MOUSE Hepatocyte nuclear factor 1-alpha OS=Mus m...    31   5.1  

>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  330 bits (847), Expect = 2e-90
 Identities = 164/192 (85%), Positives = 175/192 (91%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR DNV DDDI K+VDTFPGQSIDFFGALRARVY D VRKW
Sbjct: 301 EKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKW 360

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V EVGV+++GK LVNS+EGPPSF +P MT+DKL+ YG MLV EQENVKRVQLADKY+ EA
Sbjct: 361 VSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEA 420

Query: 541 ALGDANEDDAIK 576
           ALGDAN +DAIK
Sbjct: 421 ALGDAN-NDAIK 431


>sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase
           activase B, chloroplastic OS=Hordeum vulgare GN=RCAB
           PE=2 SV=1
          Length = 425

 Score =  330 bits (845), Expect = 4e-90
 Identities = 162/192 (84%), Positives = 175/192 (91%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIAD PTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 228 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 287

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR DNV D+ + ++VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 288 EKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKW 347

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           VGE+GVE++ K LVNSREGPP+F +P MT++KLMEYGHMLV EQENVKRVQLADKYL EA
Sbjct: 348 VGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEA 407

Query: 541 ALGDANEDDAIK 576
           ALG AN DDA+K
Sbjct: 408 ALGQAN-DDAMK 418


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  329 bits (844), Expect = 5e-90
 Identities = 159/188 (84%), Positives = 173/188 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC+GIFR DNV  +DI K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 301 EKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           +  VGV+S+GK LVNS+EGPP+F +P MT++KL+EYG+MLV EQENVKRVQLADKYL EA
Sbjct: 361 ITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEA 420

Query: 541 ALGDANED 564
           ALGDAN D
Sbjct: 421 ALGDANSD 428


>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  329 bits (844), Expect = 5e-90
 Identities = 161/192 (83%), Positives = 177/192 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR DNV ++DI K+VD FPGQSIDFFGALRARVYDD VRKW
Sbjct: 301 EKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKW 360

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V EVGV+++GK LVNS+EGPP+F +P MT+DKL++YG+MLV EQENVKRVQLADKY+ EA
Sbjct: 361 VSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEA 420

Query: 541 ALGDANEDDAIK 576
           ALGDAN+ DAIK
Sbjct: 421 ALGDANQ-DAIK 431


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  327 bits (837), Expect = 3e-89
 Identities = 157/188 (83%), Positives = 172/188 (91%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 232 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRM 291

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTR+DR+GVC GIFR DNV D+DI KIVD+FPGQSIDFFGALRARVYDD VRKW
Sbjct: 292 EKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKW 351

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V + GVE++GK LVNSREGPP F +P MT++KLMEYG+MLV EQENVKRVQLA++YL EA
Sbjct: 352 VSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEA 411

Query: 541 ALGDANED 564
           ALGDAN D
Sbjct: 412 ALGDANSD 419


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  320 bits (821), Expect = 2e-87
 Identities = 157/192 (81%), Positives = 175/192 (91%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE  RVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 243 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRM 302

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTR+DR+GVC GIFR D V ++DITK+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 303 EKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKW 362

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           +  VGV++ GK LVNS+EGPP+F +P M++DKL++YG+MLV EQENVKRVQLADKYL EA
Sbjct: 363 ISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEA 422

Query: 541 ALGDANEDDAIK 576
           ALG+ANE DAIK
Sbjct: 423 ALGNANE-DAIK 433


>sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3
          Length = 433

 Score =  319 bits (818), Expect = 6e-87
 Identities = 152/188 (80%), Positives = 171/188 (90%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 237 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRM 296

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR D V ++ + ++VDTFPGQSIDFFGALRARVYDD VR+W
Sbjct: 297 EKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRW 356

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V E GVE++ + LVNS+EGPP+F +P +T++KL+EYGHMLV EQENVKRVQLADKYL EA
Sbjct: 357 VSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEA 416

Query: 541 ALGDANED 564
           ALG+ANED
Sbjct: 417 ALGEANED 424


>sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase
           activase A, chloroplastic OS=Hordeum vulgare GN=RCAA
           PE=2 SV=1
          Length = 464

 Score =  318 bits (814), Expect = 2e-86
 Identities = 151/188 (80%), Positives = 169/188 (89%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIAD PTNVQLPG+Y K E PRVPI+VTGNDFSTLYAPLIRDGRM
Sbjct: 231 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRM 290

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTR+DRIGVC GIF+ DNV D+ + KIVDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 291 EKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKW 350

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           VG  G+E++GK LVNSR+GP +F +P MTV+KL+EYGHMLV EQ+NVKRVQLAD Y+ +A
Sbjct: 351 VGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQA 410

Query: 541 ALGDANED 564
           ALGDAN+D
Sbjct: 411 ALGDANQD 418


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  315 bits (808), Expect = 8e-86
 Identities = 153/188 (81%), Positives = 167/188 (88%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y K+E  RVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 245 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRM 304

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR DNV  +D+ KIVD FPGQSIDFFGALRARVYDD VRKW
Sbjct: 305 EKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKW 364

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V   G+E +G  L+NS +GPP+F +P MT++KL+EYG+MLV EQENVKRVQLADKYLKEA
Sbjct: 365 VSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEA 424

Query: 541 ALGDANED 564
           ALGDAN D
Sbjct: 425 ALGDANAD 432


>sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Solanum pennellii PE=2 SV=1
          Length = 459

 Score =  312 bits (800), Expect = 7e-85
 Identities = 151/188 (80%), Positives = 169/188 (89%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y K+E  RVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 240 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRM 299

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR DNV ++ + KIVD+FPGQSIDFFGALRARVYDD VRKW
Sbjct: 300 EKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKW 359

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V   G+E +G+ L+NSR+GPP+F +P MT++KL+EYG+MLV EQENVKRVQLA+ YLKEA
Sbjct: 360 VSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEA 419

Query: 541 ALGDANED 564
           ALGDAN D
Sbjct: 420 ALGDANAD 427
tr_hit_id Q9AXG1
Definition tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 OS=Gossypium hirsutum
Align length 192
Score (bit) 337.0
E-value 4.0e-91
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959856|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_N05, 5'
         (577 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   337   4e-91
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   333   5e-90
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   332   7e-90
tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   331   2e-89
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   330   3e-89
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   330   3e-89
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   330   3e-89
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   330   3e-89
tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Popul...   330   4e-89
tr|A8QIH7|A8QIH7_MORAL Chloroplast ribulose-1,5-bisphosphate car...   330   4e-89
tr|Q8GTY4|Q8GTY4_MEDSA Rubisco activase (Fragment) OS=Medicago s...   328   2e-88
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   328   2e-88
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   328   2e-88
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten...   328   2e-88
tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas...   327   2e-88
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   327   2e-88
tr|Q9ATC1|Q9ATC1_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   327   2e-88
tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   327   2e-88
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   327   2e-88
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   327   2e-88
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   327   3e-88
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   327   3e-88
tr|Q19RP2|Q19RP2_9MAGN Ribulose-1,5-bisphosphate carboxylase/oxy...   327   4e-88
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   327   4e-88
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   327   4e-88
tr|A6N1P5|A6N1P5_ORYSI Ribulose bisphosphate carboxylase/oxygena...   327   4e-88
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   326   6e-88
tr|Q308Y6|Q308Y6_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   325   8e-88
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   325   8e-88
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   325   1e-87

>tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase 1 OS=Gossypium hirsutum
           PE=2 SV=1
          Length = 438

 Score =  337 bits (863), Expect = 4e-91
 Identities = 167/192 (86%), Positives = 177/192 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 244 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 303

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR DNV  DDI K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 304 EKFYWAPTREDRIGVCTGIFRTDNVPVDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 363

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           +GEVGV S+GK LVNSREGPPSF +P MT++KL+EYG+MLV EQENVKRVQLADKYL EA
Sbjct: 364 IGEVGVNSVGKKLVNSREGPPSFEQPTMTIEKLLEYGNMLVAEQENVKRVQLADKYLSEA 423

Query: 541 ALGDANEDDAIK 576
           ALG+AN DDAIK
Sbjct: 424 ALGNAN-DDAIK 434


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  333 bits (853), Expect = 5e-90
 Identities = 164/192 (85%), Positives = 175/192 (91%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR DN+  +D+ K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 301 EKFYWAPTREDRIGVCTGIFRSDNIPKEDMVKLVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V  VGVE +GK LVNS+EGPP+F KP MT+DKL+EYG+MLV EQENVKRVQLADKYL EA
Sbjct: 361 VASVGVEGIGKKLVNSKEGPPTFEKPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLSEA 420

Query: 541 ALGDANEDDAIK 576
           ALGDANE DAIK
Sbjct: 421 ALGDANE-DAIK 431


>tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate
           carboxylase/oxygenase activase OS=Flaveria bidentis PE=2
           SV=1
          Length = 438

 Score =  332 bits (852), Expect = 7e-90
 Identities = 160/188 (85%), Positives = 174/188 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 239 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 298

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTR+DRIGVC+GIFR DNV  +DI K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 299 EKFYWAPTRDDRIGVCIGIFRTDNVPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 358

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           +GEVGVE++GK LVNSREGPP+F +P MT+DKL+EYG+MLV EQENVKRVQLAD YL  A
Sbjct: 359 IGEVGVETIGKKLVNSREGPPTFEQPKMTIDKLLEYGYMLVQEQENVKRVQLADTYLDSA 418

Query: 541 ALGDANED 564
           ALGDAN+D
Sbjct: 419 ALGDANKD 426


>tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase 2 (Fragment) OS=Gossypium
           hirsutum PE=2 SV=1
          Length = 435

 Score =  331 bits (849), Expect = 2e-89
 Identities = 160/188 (85%), Positives = 174/188 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 202 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 261

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTR+DRIGVC GIFR D V+D+DI K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 262 EKFYWAPTRDDRIGVCKGIFRTDGVRDEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 321

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           + EVGV S+GK LVNSREGPP+F +P MT++KL+EYG+MLV EQENVKRVQLADKYL EA
Sbjct: 322 ISEVGVASVGKKLVNSREGPPTFEQPKMTIEKLLEYGNMLVAEQENVKRVQLADKYLSEA 381

Query: 541 ALGDANED 564
           ALG+ANED
Sbjct: 382 ALGEANED 389


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  330 bits (847), Expect = 3e-89
 Identities = 161/188 (85%), Positives = 172/188 (91%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAP REDRIGVC GIFR DNV DDDI KIVDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 301 EKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           +  VGV+ +GK LVNS+EGPP+F +P MT++KL+EYG+MLVMEQENVKRVQLADKYL EA
Sbjct: 361 ISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEA 420

Query: 541 ALGDANED 564
           ALGDAN D
Sbjct: 421 ALGDANVD 428


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  330 bits (847), Expect = 3e-89
 Identities = 161/188 (85%), Positives = 172/188 (91%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 241 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 300

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAP REDRIGVC GIFR DNV DDDI KIVDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 301 EKFYWAPNREDRIGVCKGIFRSDNVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKW 360

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           +  VGV+ +GK LVNS+EGPP+F +P MT++KL+EYG+MLVMEQENVKRVQLADKYL EA
Sbjct: 361 ISGVGVDFIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEA 420

Query: 541 ALGDANED 564
           ALGDAN D
Sbjct: 421 ALGDANVD 428


>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 461

 Score =  330 bits (846), Expect = 3e-89
 Identities = 160/188 (85%), Positives = 174/188 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 244 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRM 303

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTR+DRIGVC+GIF+ DNV  DDI K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 304 EKFYWAPTRDDRIGVCIGIFKTDNVPQDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 363

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V  VGVES+GK LVNSREGPP+F +PAMTV+KL EYG+MLV EQENVKRVQLADKYL +A
Sbjct: 364 VSGVGVESIGKKLVNSREGPPTFEQPAMTVEKLFEYGNMLVKEQENVKRVQLADKYLSDA 423

Query: 541 ALGDANED 564
           ALG+AN+D
Sbjct: 424 ALGEANQD 431


>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 475

 Score =  330 bits (846), Expect = 3e-89
 Identities = 160/188 (85%), Positives = 174/188 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 244 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRM 303

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC+GIF+ DNV +DDI K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 304 EKFYWAPTREDRIGVCIGIFKTDNVPEDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 363

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V  VGVES+GK LVNSREGPP+F +P MTV+KL EYG+MLV EQENVKRVQLADKYL +A
Sbjct: 364 VSGVGVESIGKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSDA 423

Query: 541 ALGDANED 564
           ALG+AN+D
Sbjct: 424 ALGEANQD 431


>tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 361

 Score =  330 bits (845), Expect = 4e-89
 Identities = 159/188 (84%), Positives = 174/188 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KE+ PRVP+IVTGNDFSTLYAPLIRDGRM
Sbjct: 165 TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPVIVTGNDFSTLYAPLIRDGRM 224

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC+GIF+ DNV +DDI K+VDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 225 EKFYWAPTREDRIGVCIGIFKTDNVPEDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 284

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           V  VGVES+GK LVNSREGPP+F +P MTV+KL EYG+MLV EQENVKRVQLADKYL +A
Sbjct: 285 VSGVGVESIGKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSDA 344

Query: 541 ALGDANED 564
           ALG+AN+D
Sbjct: 345 ALGEANQD 352


>tr|A8QIH7|A8QIH7_MORAL Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase (Fragment) OS=Morus alba
           var. multicaulis PE=2 SV=1
          Length = 246

 Score =  330 bits (845), Expect = 4e-89
 Identities = 160/188 (85%), Positives = 174/188 (92%)
 Frame = +1

Query: 1   TQYTVNNQMVNATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRM 180
           TQYTVNNQMVNATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 15  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 74

Query: 181 EKFYWAPTREDRIGVCLGIFRHDNVKDDDITKIVDTFPGQSIDFFGALRARVYDDLVRKW 360
           EKFYWAPTREDRIGVC GIFR D+V ++DI KIVDTFPGQSIDFFGALRARVYDD VRKW
Sbjct: 75  EKFYWAPTREDRIGVCTGIFRSDHVPEEDIVKIVDTFPGQSIDFFGALRARVYDDEVRKW 134

Query: 361 VGEVGVESMGKMLVNSREGPPSFVKPAMTVDKLMEYGHMLVMEQENVKRVQLADKYLKEA 540
           +  VGVE++GK LVNS+EGPP+F +P MTV+KL+EYG+MLV EQENVKRVQLADKYL EA
Sbjct: 135 ISGVGVETIGKKLVNSKEGPPTFDQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLSEA 194

Query: 541 ALGDANED 564
           ALGDAN+D
Sbjct: 195 ALGDANQD 202