DK959876 |
Clone id |
TST39A01NGRL0005_O03 |
Library |
TST39 |
Length |
664 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_O03. 5' end sequence. |
Accession |
DK959876 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL42Contig1 |
Sequence |
CGCTACTGCTGTTAGGGTTTCTCCACGTGCCATCGTGATTTAGTTCGAGCTACCGTAATT CGGTCTTGTAGATCACTACAGAATTTCCGTATCGACGCGAGGTTTTGGGACACAGCAGAT CTCTCTCGTTCTACTTCAGATCTGTGTCCAGGAGCTAAGCGAGCTCAGGATTGATGGAGA ATATTTATTCTTTCTGGAGTCTAAATGACAATAATCGGCGCTCTCCCACTGAGATGCAAG AGGATCAAAGCTGGAAAGTAGCAGCTACCAAGCTTGCTTTTGCGGATCAGATGAGGCTGA AGTTTGATAGGTCTAGATCTGATGCGAAGGTTGTGGCCCCTCATGAGAAGAACATTAAAC AAGCAAAGGGACGATCCAAGGGCAGAGCTGAAGACATGCTGAAGGGGGAAGGTTTCAACC AGAAGTTTTCGGATGGGGATTTGAGATATGGAGATTTGGGTCAGAAGCTTGGAGCAGGTA ACATGTCAACATCACAGATTGTTGGCAGTGCAGATAAACGATTCAAGTCTCTTCCGCCTG CTGAAACACTTCCTAGACACGAAACTTTGGGTGGCTACATATTTGTCTGCAACAATGATA CCATGGCTGAGGACTTGAAGCGGCAATTATTTGGTTTGCCCCAAAGGTATCGTGATTCTG TGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37707 |
Definition |
sp|P37707|B2_DAUCA B2 protein OS=Daucus carota |
Align length |
63 |
Score (bit) |
96.7 |
E-value |
1.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQZ7 |
Definition |
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
184 |
Score (bit) |
129.0 |
E-value |
2.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959876|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_O03, 5' (664 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 129 2e-28 tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 116 1e-24 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 112 3e-23 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 110 8e-23 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 108 4e-22 tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/... 103 1e-20 tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P... 103 1e-20 tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella paten... 100 6e-20 tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten... 100 8e-20 tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 98 4e-19 tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul... 98 4e-19 tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m... 97 9e-19 tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella paten... 96 2e-18 tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ... 96 2e-18 tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromos... 95 3e-18 tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g4205... 95 3e-18 tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m... 94 6e-18 tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs... 94 1e-17 tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza... 94 1e-17 tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 94 1e-17 tr|A3B5I3|A3B5I3_ORYSJ Putative uncharacterized protein OS=Oryza... 94 1e-17 tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2... 92 2e-17 tr|Q5JK83|Q5JK83_ORYSJ cDNA clone:001-207-H09, full insert seque... 90 1e-16 tr|Q5JK82|Q5JK82_ORYSJ Putative GDA2 protein (Os01g0550300 prote... 90 1e-16 tr|B8AA12|B8AA12_ORYSI Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|A2ZU93|A2ZU93_ORYSJ Putative uncharacterized protein OS=Oryza... 90 1e-16 tr|A7Q7R8|A7Q7R8_VITVI Chromosome chr18 scaffold_61, whole genom... 87 1e-15 tr|A5AK97|A5AK97_VITVI Putative uncharacterized protein OS=Vitis... 87 1e-15 tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1 86 3e-15 tr|B7ZZ36|B7ZZ36_MAIZE Putative uncharacterized protein OS=Zea m... 85 5e-15
>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 129 bits (323), Expect = 2e-28 Identities = 80/184 (43%), Positives = 99/184 (53%), Gaps = 21/184 (11%) Frame = +3
Query: 174 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 353 M N YSFW + R +D W +AA++LA A+ R K DR+ +P E Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58
Query: 354 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 476 + KG+ KG++E L+ N K + D + GD G K GA Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116
Query: 477 --GNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRY 650 N + S + DKRFK+LP E LPR+E LGGYIFVCNNDTM EDLKRQLFGLPQRY Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTEMLPRNEILGGYIFVCNNDTMQEDLKRQLFGLPQRY 176
Query: 651 RDSV 662 RDSV Sbjct: 177 RDSV 180
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 116 bits (290), Expect = 1e-24 Identities = 76/177 (42%), Positives = 104/177 (58%), Gaps = 14/177 (7%) Frame = +3
Query: 174 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 353 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 354 IKQAKGRSKGRAEDMLKGEGFNQ--KFSDGDLRYG------DLGQKLGAGNMSTSQIVG- 506 +K G+S G+ E++ + FN K ++ + G ++ + N +TS Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114
Query: 507 -----SADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSV 662 S +KRFK+LP +E LPR+E LGGYIFVCNNDTM EDLKRQLFGLPQRYRDSV Sbjct: 115 NYNNNSFEKRFKTLPSSEMLPRNEILGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSV 171
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 112 bits (279), Expect = 3e-23 Identities = 79/202 (39%), Positives = 99/202 (49%), Gaps = 39/202 (19%) Frame = +3
Query: 174 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 353 M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56
Query: 354 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 491 + G + D L F + S LR G QK AGNM++ Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116
Query: 492 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 596 ++ G+ DKRFK+LP AETLPR+E LGGYIFVCNN Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNN 176
Query: 597 DTMAEDLKRQLFGLPQRYRDSV 662 DTM EDLKRQLFGLP RYRDSV Sbjct: 177 DTMQEDLKRQLFGLPPRYRDSV 198
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 110 bits (275), Expect = 8e-23 Identities = 82/215 (38%), Positives = 102/215 (47%), Gaps = 52/215 (24%) Frame = +3
Query: 174 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 353 M+N++SFW L D R + EDQSW AA++LA +Q R K +R N Sbjct: 1 MDNMHSFWQLGDE-LRGQSRTSEDQSWLRAASRLA--EQTRFKGERMN-----------N 46
Query: 354 IKQAKGRSKGRAEDML------KGEGFNQKFS-------------DGDLRYG-------- 452 + +KG ++ R D + E FN F+ LR G Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106
Query: 453 ------DLGQ----KLGAGNMST---------------SQIVGSADKRFKSLPPAETLPR 557 ++G K G N+S S + DKRFK+LP ETLPR Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATETLPR 166
Query: 558 HETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSV 662 +E LGGYIFVCNNDTM EDLKRQLFGLP RYRDSV Sbjct: 167 NEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSV 201
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 108 bits (269), Expect = 4e-22 Identities = 74/200 (37%), Positives = 96/200 (48%), Gaps = 37/200 (18%) Frame = +3
Query: 174 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 341 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A++ P Sbjct: 1 MENMQSYWQFGDE-LRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAEI-RP 58
Query: 342 HEKNI-------------------KQAKGRSKGRAEDMLK--------------GEGFNQ 422 ++ K + SK R D + G Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118
Query: 423 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 602 KF+ + Y K N+ ++ S DKRFK+LP AETLP++E LGGYIFVCNNDT Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAETLPKNEVLGGYIFVCNNDT 176
Query: 603 MAEDLKRQLFGLPQRYRDSV 662 M EDLKR LFGLP RYRDSV Sbjct: 177 MQEDLKRLLFGLPPRYRDSV 196
>tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/MOJ10_18) OS=Arabidopsis thaliana GN=At3g27090 PE=2 SV=1 Length = 296
Score = 103 bits (256), Expect = 1e-20 Identities = 72/202 (35%), Positives = 92/202 (45%), Gaps = 44/202 (21%) Frame = +3
Query: 189 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 335 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 336 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 491 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 492 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 596 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 597 DTMAEDLKRQLFGLPQRYRDSV 662 DTM ED+KR LFGLP RYRDSV Sbjct: 172 DTMQEDMKRHLFGLPPRYRDSV 193
>tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 296
Score = 103 bits (256), Expect = 1e-20 Identities = 72/202 (35%), Positives = 92/202 (45%), Gaps = 44/202 (21%) Frame = +3
Query: 189 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 335 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 336 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 491 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 492 SQIVGS-------------------------ADKRFKSLPPAETLPRHETLGGYIFVCNN 596 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNIVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 597 DTMAEDLKRQLFGLPQRYRDSV 662 DTM ED+KR LFGLP RYRDSV Sbjct: 172 DTMQEDMKRHLFGLPPRYRDSV 193
>tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113222 PE=4 SV=1 Length = 174
Score = 100 bits (250), Expect = 6e-20 Identities = 48/56 (85%), Positives = 50/56 (89%) Frame = +3
Query: 495 QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQLFGLPQRYRDSV 662 QI + DKRFKSLPPAE LPR+ TLGGYIFVCNNDTM EDLKRQLFGLPQRYRDSV Sbjct: 12 QITVNPDKRFKSLPPAEILPRNTTLGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSV 67
>tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191832 PE=4 SV=1 Length = 177
Score = 100 bits (249), Expect = 8e-20 Identities = 51/72 (70%), Positives = 55/72 (76%), Gaps = 1/72 (1%) Frame = +3
Query: 450 GDLGQKLGAGNMSTS-QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMAEDLKRQ 626 G K G N +T Q+ S +KRFKSLP AE LPR+ TLGGYIFVCNNDTM EDLKRQ Sbjct: 3 GPTAPKTGVSNGNTQFQVTVSHEKRFKSLPSAEVLPRNVTLGGYIFVCNNDTMQEDLKRQ 62
Query: 627 LFGLPQRYRDSV 662 LFGLPQRYRDSV Sbjct: 63 LFGLPQRYRDSV 74
>tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 Length = 301
Score = 98.2 bits (243), Expect = 4e-19 Identities = 71/198 (35%), Positives = 92/198 (46%), Gaps = 40/198 (20%) Frame = +3
Query: 189 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAF-----ADQMRLKFDRSRSDAKVVAPHEKN 353 S W L D R P ++ ED+ W + +KLA ++M D + D H+ + Sbjct: 3 SLWHLGDELRGQP-KVVEDRQWSLMTSKLAEITRSKGERMNTVPDAKQWDKTSYQLHDDS 61
Query: 354 ---------------IKQA-------KGRSKGRAEDMLKGEGFNQKFSDGDLRYG----- 452 + +A +G + LKG N + + G Sbjct: 62 RMGHINLGLMNLDLKMNEAAAMKLPFRGMPYNMNQMYLKGSNANSNVNAFKMNVGVNKYS 121
Query: 453 ------DLGQKLGAGNMSTSQIVGS--ADKRFKSLPPAETLPRHETLGGYIFVCNNDTMA 608 D K GN + G+ ADKRFK+LP +E LPR+E LGGYIFVCNNDTM Sbjct: 122 NSPNGKDANGKNNGGNNNNGSANGTSVADKRFKTLPTSEMLPRNEVLGGYIFVCNNDTMQ 181
Query: 609 EDLKRQLFGLPQRYRDSV 662 EDLKRQLFGLP RYRDSV Sbjct: 182 EDLKRQLFGLPARYRDSV 199
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