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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959909
Clone id TST39A01NGRL0005_P12
Library
Length 202
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_P12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTTCATTTTGTCGCATCATCTAGGCTATAACTATCTTTCTGCGTTGCACGACATACGAT
CATAAGAGCTGGAGTTCGGGGCAATGGAGGGCGTGACCCACAGAACCATCTCGACCAATG
GCATCTCCCTGCACTTTGACGAAATGGGCTCAGGTCCTATTGTGCTTTTTCTTCGTGGTT
TCCCTGAAGGGTGGTATGGATG
■■Homology search results ■■ -
sp_hit_id O31581
Definition sp|O31581|YFHM_BACSU AB hydrolase superfamily protein yfhM OS=Bacillus subtilis
Align length 41
Score (bit) 45.4
E-value 8.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959909|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_P12, 5'
         (187 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O31581|YFHM_BACSU AB hydrolase superfamily protein yfhM OS=Ba...    45   8e-05
sp|P80299|HYES_RAT Epoxide hydrolase 2 OS=Rattus norvegicus GN=E...    42   0.001
sp|Q6Q2C2|HYES_PIG Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE...    41   0.002
sp|P34914|HYES_MOUSE Epoxide hydrolase 2 OS=Mus musculus GN=Ephx...    41   0.002
sp|P34913|HYES_HUMAN Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX...    39   0.006
sp|Q3V1F8|ABHD9_MOUSE Abhydrolase domain-containing protein 9 OS...    37   0.023
sp|Q9H6B9|ABHD9_HUMAN Abhydrolase domain-containing protein 9 OS...    37   0.030
sp|O52866|HYES_CORS2 Soluble epoxide hydrolase OS=Corynebacteriu...    35   0.088
sp|Q01398|DEH1_MORSB Haloacetate dehalogenase H-1 OS=Moraxella s...    32   0.97 
sp|Q0IIS3|ABHD7_XENTR Abhydrolase domain-containing protein 7 OS...    31   1.7  
sp|Q8TCU4|ALMS1_HUMAN Alstrom syndrome protein 1 OS=Homo sapiens...    30   4.8  
sp|Q6IE26|ABHD7_MOUSE Abhydrolase domain-containing protein 7 OS...    30   4.8  
sp|Q8IUS5|ABHD7_HUMAN Abhydrolase domain-containing protein 7 OS...    30   4.8  
sp|Q1B6A7|MBTB_MYCSS Phenyloxazoline synthase mbtB OS=Mycobacter...    29   8.5  

>sp|O31581|YFHM_BACSU AB hydrolase superfamily protein yfhM
           OS=Bacillus subtilis GN=yfhM PE=3 SV=1
          Length = 286

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMG--SGPIVLFLRGFPEGWYG 185
           M+GV  + ++TNGI+LH    G   GP+++ L GFPE WYG
Sbjct: 1   MDGVKCQFVNTNGITLHVAAAGREDGPLIVLLHGFPEFWYG 41


>sp|P80299|HYES_RAT Epoxide hydrolase 2 OS=Rattus norvegicus
           GN=Ephx2 PE=1 SV=1
          Length = 554

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 78  VTHRTISTN-GISLHFDEMGSGPIVLFLRGFPEGWY 182
           V+H  ++   GI LHF EMGSGP +    GFPE W+
Sbjct: 235 VSHGYVTVKPGIRLHFVEMGSGPAICLCHGFPESWF 270


>sp|Q6Q2C2|HYES_PIG Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2
           SV=1
          Length = 555

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +3

Query: 105 GISLHFDEMGSGPIVLFLRGFPEGWY 182
           G+ LHF EMGSGP V    GFPE W+
Sbjct: 247 GVRLHFVEMGSGPAVCLCHGFPESWF 272


>sp|P34914|HYES_MOUSE Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2
           PE=1 SV=2
          Length = 554

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 78  VTHRTISTN-GISLHFDEMGSGPIVLFLRGFPEGWY 182
           V+H  ++   GI LHF EMGSGP +    GFPE W+
Sbjct: 235 VSHGYVTVKPGIRLHFVEMGSGPALCLCHGFPESWF 270


>sp|P34913|HYES_HUMAN Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2
           PE=1 SV=2
          Length = 555

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3

Query: 108 ISLHFDEMGSGPIVLFLRGFPEGWY 182
           + LHF E+GSGP V    GFPE WY
Sbjct: 248 VRLHFVELGSGPAVCLCHGFPESWY 272


>sp|Q3V1F8|ABHD9_MOUSE Abhydrolase domain-containing protein 9
           OS=Mus musculus GN=Abhd9 PE=2 SV=2
          Length = 367

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  ISTNGISLHFDEMG--SGPIVLFLRGFPEGWY 182
           + ++G+ LH+   G  +GP++LFL GFPE W+
Sbjct: 87  VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWF 118


>sp|Q9H6B9|ABHD9_HUMAN Abhydrolase domain-containing protein 9
           OS=Homo sapiens GN=ABHD9 PE=2 SV=1
          Length = 360

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  ISTNGISLHFDEMG--SGPIVLFLRGFPEGWY 182
           + ++G+ LH+   G  +GP++LFL GFPE W+
Sbjct: 80  LKSSGLRLHYVSAGRGNGPLMLFLHGFPENWF 111


>sp|O52866|HYES_CORS2 Soluble epoxide hydrolase OS=Corynebacterium
           sp. (strain C12) PE=1 SV=3
          Length = 286

 Score = 35.4 bits (80), Expect = 0.088
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 78  VTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           +TH     NG  +H+   GSG  ++ L G+P+ WY
Sbjct: 5   ITHHQAMINGYRMHYVTAGSGYPLVLLHGWPQSWY 39


>sp|Q01398|DEH1_MORSB Haloacetate dehalogenase H-1 OS=Moraxella sp.
           (strain B) GN=dehH1 PE=1 SV=1
          Length = 294

 Score = 32.0 bits (71), Expect = 0.97
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 75  GVTHRTISTNGISLHFDEMGSGPIVLFLRGFPE 173
           G  + T++ +G+ + +   G GP VL L GFP+
Sbjct: 5   GFKNSTVTVDGVDIAYTVSGEGPPVLMLHGFPQ 37


>sp|Q0IIS3|ABHD7_XENTR Abhydrolase domain-containing protein 7
           OS=Xenopus tropicalis GN=abhd7 PE=2 SV=1
          Length = 367

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +3

Query: 102 NGISLHFDEMGS--GPIVLFLRGFPEGWY 182
           +GI  H+   G    P++L L GFPE WY
Sbjct: 83  SGIRFHYVASGDKRNPLMLLLHGFPENWY 111
tr_hit_id A7Q8F3
Definition tr|A7Q8F3|A7Q8F3_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera
Align length 38
Score (bit) 61.6
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959909|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_P12, 5'
         (187 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7Q8F3|A7Q8F3_VITVI Chromosome chr5 scaffold_64, whole genome...    62   2e-08
tr|Q39856|Q39856_SOYBN Epoxide hydrolase OS=Glycine max PE=2 SV=1      61   2e-08
tr|O49857|O49857_SOYBN Epoxide hydrolase OS=Glycine max PE=4 SV=1      61   2e-08
tr|Q1DBS7|Q1DBS7_MYXXD Putative epoxide hydrolase OS=Myxococcus ...    59   9e-08
tr|A7PRY6|A7PRY6_VITVI Chromosome chr14 scaffold_27, whole genom...    59   9e-08
tr|A5BIA2|A5BIA2_VITVI Putative uncharacterized protein OS=Vitis...    59   9e-08
tr|B3VMR4|B3VMR4_NICBE Epoxide hydrolase OS=Nicotiana benthamian...    59   2e-07
tr|B3VMR3|B3VMR3_NICBE Epoxide hydrolase OS=Nicotiana benthamian...    58   2e-07
tr|A7Q8F5|A7Q8F5_VITVI Chromosome chr5 scaffold_64, whole genome...    58   3e-07
tr|A9NKQ4|A9NKQ4_PICSI Putative uncharacterized protein OS=Picea...    57   4e-07
tr|A9S933|A9S933_PHYPA Predicted protein OS=Physcomitrella paten...    57   5e-07
tr|O81299|O81299_ARATH AT4g02340 protein OS=Arabidopsis thaliana...    57   6e-07
tr|A7Q8F2|A7Q8F2_VITVI Chromosome chr5 scaffold_64, whole genome...    56   8e-07
tr|A2Q319|A2Q319_MEDTR Epoxide hydrolase OS=Medicago truncatula ...    56   8e-07
tr|B7FKA3|B7FKA3_MEDTR Putative uncharacterized protein OS=Medic...    56   1e-06
tr|B7FJM9|B7FJM9_MEDTR Putative uncharacterized protein OS=Medic...    56   1e-06
tr|A2Q324|A2Q324_MEDTR Epoxide hydrolase OS=Medicago truncatula ...    56   1e-06
tr|A2Q320|A2Q320_MEDTR Epoxide hydrolase OS=Medicago truncatula ...    56   1e-06
tr|B8LKY4|B8LKY4_PICSI Putative uncharacterized protein OS=Picea...    55   1e-06
tr|A9RHZ9|A9RHZ9_PHYPA Predicted protein OS=Physcomitrella paten...    55   1e-06
tr|Q76E11|Q76E11_CITJA Soluble epoxide hydrolase OS=Citrus jambh...    54   3e-06
tr|A9PBN3|A9PBN3_POPTR Putative uncharacterized protein OS=Popul...    54   3e-06
tr|A7PKH5|A7PKH5_VITVI Chromosome chr15 scaffold_19, whole genom...    54   5e-06
tr|A5C6E7|A5C6E7_VITVI Putative uncharacterized protein OS=Vitis...    54   5e-06
tr|A2Q321|A2Q321_MEDTR Epoxide hydrolase OS=Medicago truncatula ...    54   5e-06
tr|Q0BZI5|Q0BZI5_HYPNA Putative epoxide hydrolase OS=Hyphomonas ...    53   7e-06
tr|Q2MF42|Q2MF42_STRRY Putative epoxide hydrolase OS=Streptomyce...    53   7e-06
tr|A0YFZ8|A0YFZ8_9GAMM Putative epoxide hydrolase OS=marine gamm...    53   7e-06
tr|Q41414|Q41414_SOLTU Epoxide hydrolase OS=Solanum tuberosum PE...    53   7e-06
tr|Q41412|Q41412_SOLTU Epoxide hydrolase OS=Solanum tuberosum PE...    53   7e-06

>tr|A7Q8F3|A7Q8F3_VITVI Chromosome chr5 scaffold_64, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033032001
           PE=4 SV=1
          Length = 317

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           MEGV HRT+  NGI++H  E G GPI+LF+ GFPE WY
Sbjct: 1   MEGVEHRTVKANGINIHVAEKGEGPIILFIHGFPESWY 38


>tr|Q39856|Q39856_SOYBN Epoxide hydrolase OS=Glycine max PE=2 SV=1
          Length = 341

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +3

Query: 54  LEFGAMEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           +EF  ME + HRT+  NGI +H  E G GP+VLFL GFPE WY
Sbjct: 21  VEFNEMEQIKHRTVEVNGIKMHVAEKGEGPVVLFLHGFPELWY 63


>tr|O49857|O49857_SOYBN Epoxide hydrolase OS=Glycine max PE=4 SV=1
          Length = 341

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +3

Query: 54  LEFGAMEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           +EF  ME + HRT+  NGI +H  E G GP+VLFL GFPE WY
Sbjct: 21  VEFNEMEQIKHRTVEVNGIKMHVAEKGEGPVVLFLHGFPELWY 63


>tr|Q1DBS7|Q1DBS7_MYXXD Putative epoxide hydrolase OS=Myxococcus
           xanthus (strain DK 1622) GN=MXAN_1644 PE=4 SV=1
          Length = 318

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           M  +THRT+ TNGI+LH  E GSGP+VL L G+PE WY
Sbjct: 1   MADITHRTVKTNGINLHLAEAGSGPLVLLLHGWPESWY 38


>tr|A7PRY6|A7PRY6_VITVI Chromosome chr14 scaffold_27, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022685001
           PE=4 SV=1
          Length = 317

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           MEG+ HR +S NGI +H  E G GP+VLFL GFPE WY
Sbjct: 1   MEGIEHRMVSVNGIKMHVAEKGQGPVVLFLHGFPELWY 38


>tr|A5BIA2|A5BIA2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022460 PE=4 SV=1
          Length = 175

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           MEG+ HR +S NGI +H  E G GP+VLFL GFPE WY
Sbjct: 1   MEGIEHRMVSVNGIKMHVAEKGQGPVVLFLHGFPELWY 38


>tr|B3VMR4|B3VMR4_NICBE Epoxide hydrolase OS=Nicotiana benthamiana
           GN=NbEH2.2 PE=2 SV=1
          Length = 315

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           ME + HRT++ NGI++H  E G GP+VLFL GFPE WY
Sbjct: 1   MESIEHRTVNVNGINMHVAEKGKGPVVLFLHGFPELWY 38


>tr|B3VMR3|B3VMR3_NICBE Epoxide hydrolase OS=Nicotiana benthamiana
           GN=NbEH2.1 PE=2 SV=1
          Length = 315

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           ME + HRT++ NGI++H  E G GP++LFL GFPE WY
Sbjct: 1   MESIEHRTVNVNGINMHVAEKGKGPVILFLHGFPELWY 38


>tr|A7Q8F5|A7Q8F5_VITVI Chromosome chr5 scaffold_64, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033034001
           PE=4 SV=1
          Length = 317

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 69  MEGVTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           ME + HRT+  NGI++H  E G GPI+LFL GFPE WY
Sbjct: 1   MEEIQHRTVEANGINIHIAEKGQGPIILFLHGFPELWY 38


>tr|A9NKQ4|A9NKQ4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 318

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +3

Query: 78  VTHRTISTNGISLHFDEMGSGPIVLFLRGFPEGWY 182
           +THRT+ TNGI +H  E GSGP+VL + GFPE WY
Sbjct: 3   ITHRTVETNGIKMHIAEQGSGPVVLLIHGFPELWY 37