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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959913
Clone id TST39A01NGRL0005_P16
Library
Length 685
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_P16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGTGTGGTAGCACCATTTACTGGTCCTGAGAACGGGCGAGCCCCCCTCGGAAATGCGTA
GCTGCTACAGCGCAAAACACGGATCGCAGGAGCCAAGCTTAGCAGGGTGCGACGTGCGTT
ACGCAACTCCACAAGTCGAGGCTCTTCCCCACACGTGACGAACCTCGTGGGCTGCTCAGT
GCTATTGCTGCCGCCATGATCACTCCGTCCAAATTCCAATACATCAGCGCACTCTGACTG
GAGAAGGAGCTTAGGTGCAGGTATACACATGGTAGATCAAAGCCACCTATAGGGTGACGA
GGTTGCATAAATGAATGCAGCACATGAAGAGATCTACGTGTAGAAGATGGGGTTGAAGAT
GATGTGCGCCTGCTCTAGCGAGCAATTCAAGGCAGACCGCGACTCCATTGCAGCCATGGC
GGCTCAAGATATGGCTGCAACCAGTGGTCTTTCTGCCAAGACCATCGAGGGCGAAGCAAA
GCTCGATGAGGGCAACATCGAGGAGGCTGAGTCCTCCCTTCGTGAAGCTTTGTCTCTCAA
CTATGAGGAAGCTCGAGCACTTTTAGGACGTTTGGAATATCANAGGGGAAATGTGGAGGC
TGCTTTACAAGTTTTTGACGGCATAGATATTAGCACAGTCAGATCTCGGATGAAAGCTTC
TATAACAAGCAAGAGTTCTCAGCGA
■■Homology search results ■■ -
sp_hit_id Q5R6F3
Definition sp|Q5R6F3|ZN512_PONAB Zinc finger protein 512 OS=Pongo abelii
Align length 37
Score (bit) 31.2
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959913|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_P16, 5'
         (685 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5R6F3|ZN512_PONAB Zinc finger protein 512 OS=Pongo abelii GN...    31   5.4  
sp|A4FV61|ZN512_BOVIN Zinc finger protein 512 OS=Bos taurus GN=Z...    31   5.4  
sp|O60152|UBR1_SCHPO E3 ubiquitin-protein ligase ubr1 OS=Schizos...    31   5.4  
sp|Q69Z99|ZN512_MOUSE Zinc finger protein 512 OS=Mus musculus GN...    30   9.2  

>sp|Q5R6F3|ZN512_PONAB Zinc finger protein 512 OS=Pongo abelii
           GN=ZNF512 PE=2 SV=1
          Length = 567

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +2

Query: 68  QRKTRIAGAKLSRVRRALRNSTSRGSSPHVTNLVGCS 178
           QR TRI GAK SR + ++++++ + + PH  +L G S
Sbjct: 20  QRSTRIVGAKNSRTQCSIKDNSFQYTIPHDDSLSGSS 56


>sp|A4FV61|ZN512_BOVIN Zinc finger protein 512 OS=Bos taurus
           GN=ZNF512 PE=2 SV=1
          Length = 567

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +2

Query: 68  QRKTRIAGAKLSRVRRALRNSTSRGSSPHVTNLVGCS 178
           QR TRI GAK SR + ++++++ + + PH  +L G S
Sbjct: 20  QRSTRIVGAKNSRTQCSIKDNSFQYTIPHDDSLSGSS 56


>sp|O60152|UBR1_SCHPO E3 ubiquitin-protein ligase ubr1
            OS=Schizosaccharomyces pombe GN=ubr1 PE=2 SV=1
          Length = 1958

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = -1

Query: 457  GRKTTGCSHILSRHGCNGVAVCLELLARAGAHHLQPHLLHVDLFMC--CIHLCNLV 296
            G   TGC H +           + L  RA  +   PH L +  F+C  C  LCN +
Sbjct: 1285 GLHATGCGHFMHIDCFKNHIATVTLATRANPYRNHPHNLSMKEFLCPLCKALCNTI 1340


>sp|Q69Z99|ZN512_MOUSE Zinc finger protein 512 OS=Mus musculus
           GN=Znf512 PE=2 SV=2
          Length = 562

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = +2

Query: 68  QRKTRIAGAKLSRVRRALRNSTSRGSSPHVTNLVGCS 178
           QR TRI GAK +R + ++++++ + + PH  +L G S
Sbjct: 20  QRSTRIVGAKNNRAQCSIKDNSFQYTIPHEDSLSGSS 56
tr_hit_id A5BYF1
Definition tr|A5BYF1|A5BYF1_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 111
Score (bit) 85.9
E-value 2.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959913|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0005_P16, 5'
         (685 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BYF1|A5BYF1_VITVI Putative uncharacterized protein OS=Vitis...    86   2e-15
tr|Q337L2|Q337L2_ORYSJ Os10g0471400 protein OS=Oryza sativa subs...    85   5e-15
tr|A3C5N2|A3C5N2_ORYSJ Putative uncharacterized protein OS=Oryza...    85   5e-15
tr|A7Q1P5|A7Q1P5_VITVI Chromosome chr7 scaffold_44, whole genome...    84   8e-15
tr|A7NU93|A7NU93_VITVI Chromosome chr18 scaffold_1, whole genome...    84   8e-15
tr|Q66GN3|Q66GN3_ARATH At4g28600 OS=Arabidopsis thaliana GN=At4g...    82   3e-14
tr|A7P533|A7P533_VITVI Chromosome chr4 scaffold_6, whole genome ...    81   5e-14
tr|A5BI73|A5BI73_VITVI Putative uncharacterized protein OS=Vitis...    81   5e-14
tr|A5ASV5|A5ASV5_VITVI Putative uncharacterized protein OS=Vitis...    81   5e-14
tr|A5BC29|A5BC29_VITVI Putative uncharacterized protein OS=Vitis...    80   9e-14
tr|A7NXF5|A7NXF5_VITVI Chromosome chr5 scaffold_2, whole genome ...    80   1e-13
tr|Q9SKX3|Q9SKX3_ARATH Putative uncharacterized protein At2g4304...    78   6e-13
tr|Q8GZN1|Q8GZN1_ARATH At2g43040 OS=Arabidopsis thaliana GN=NPG ...    78   6e-13
tr|Q9CB03|Q9CB03_ARATH F17L21.25 (At1g27460/F17L21_26) OS=Arabid...    77   1e-12
tr|Q9M0H1|Q9M0H1_ARATH Putative uncharacterized protein AT4g2860...    77   1e-12
tr|Q2QNH6|Q2QNH6_ORYSJ Os12g0565300 protein OS=Oryza sativa subs...    76   2e-12
tr|B6U2D5|B6U2D5_MAIZE Calmodulin-binding protein MPCBP OS=Zea m...    72   3e-11
tr|A5CAL8|A5CAL8_VITVI Putative uncharacterized protein OS=Vitis...    70   2e-10
tr|A2Z8G1|A2Z8G1_ORYSI Putative uncharacterized protein OS=Oryza...    70   2e-10
tr|B8AQ51|B8AQ51_ORYSI Putative uncharacterized protein OS=Oryza...    65   3e-09
tr|Q2QZE9|Q2QZE9_ORYSJ Calmodulin-binding protein MPCBP, putativ...    64   9e-09
tr|A3BQQ9|A3BQQ9_ORYSJ Putative uncharacterized protein OS=Oryza...    64   9e-09
tr|A2X2C0|A2X2C0_ORYSI Putative uncharacterized protein OS=Oryza...    64   9e-09
tr|A9SEQ8|A9SEQ8_PHYPA Predicted protein OS=Physcomitrella paten...    62   3e-08
tr|Q7XJB9|Q7XJB9_ORYSI Calmodulin-binding protein OS=Oryza sativ...    61   6e-08
tr|A9RFW7|A9RFW7_PHYPA Predicted protein OS=Physcomitrella paten...    60   1e-07
tr|A7P503|A7P503_VITVI Chromosome chr4 scaffold_6, whole genome ...    60   1e-07
tr|B8BMJ2|B8BMJ2_ORYSI Putative uncharacterized protein OS=Oryza...    58   5e-07
tr|A3CIH9|A3CIH9_ORYSJ Putative uncharacterized protein OS=Oryza...    58   5e-07
tr|A5C9X2|A5C9X2_VITVI Putative uncharacterized protein OS=Vitis...    54   9e-06

>tr|A5BYF1|A5BYF1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013944 PE=4 SV=1
          Length = 814

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
 Frame = +2

Query: 356 KMMCACSSEQFK-ADRDSIXXXXXXXXXXTSGLSAKTIEGEAKLDEGNIXXXXXXXXXXX 532
           KM+CACS EQFK  D               SGLS++T + E+K ++  +           
Sbjct: 124 KMLCACSGEQFKFEDAPRSPESLATRDFSASGLSSRTGDWESKFEDTQVDEAESTLRDAL 183

Query: 533 XXNYEEARALLGRLEYXRGNVEAALQVFDGIDISTVRSRMKASITSKSSQR 685
             NYEEARALLGRLEY RGN +AA QVF GIDI  +  RM  +I  ++ QR
Sbjct: 184 SLNYEEARALLGRLEYQRGNFDAAFQVFHGIDIRGLTPRMTRAIVERTWQR 234


>tr|Q337L2|Q337L2_ORYSJ Os10g0471400 protein OS=Oryza sativa subsp.
           japonica GN=Os10g0471400 PE=4 SV=1
          Length = 727

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 52/113 (46%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
 Frame = +2

Query: 353 LKMMCACSSEQFKADRDSIXXXXXXXXXX--TSGLSAKTIEGEAKLDEGNIXXXXXXXXX 526
           + M C CS EQ +A  + I             SG S++  E E  LD GNI         
Sbjct: 18  MAMECLCSGEQLRAADEIIRSPESAITKDCSASGYSSQNGEIEQYLDNGNIEEAELSLRE 77

Query: 527 XXXXNYEEARALLGRLEYXRGNVEAALQVFDGIDISTVRSRMKASITSKSSQR 685
               NYEEARALLGRLEY RG+VEAAL+VFDGIDI  +  +MK SI  K  +R
Sbjct: 78  GVCLNYEEARALLGRLEYQRGHVEAALRVFDGIDIPALVPKMKISIARKVDRR 130


>tr|A3C5N2|A3C5N2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_030604 PE=4 SV=1
          Length = 1934

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 52/113 (46%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
 Frame = +2

Query: 353 LKMMCACSSEQFKADRDSIXXXXXXXXXX--TSGLSAKTIEGEAKLDEGNIXXXXXXXXX 526
           + M C CS EQ +A  + I             SG S++  E E  LD GNI         
Sbjct: 18  MAMECLCSGEQLRAADEIIRSPESAITKDCSASGYSSQNGEIEQYLDNGNIEEAELSLRE 77

Query: 527 XXXXNYEEARALLGRLEYXRGNVEAALQVFDGIDISTVRSRMKASITSKSSQR 685
               NYEEARALLGRLEY RG+VEAAL+VFDGIDI  +  +MK SI  K  +R
Sbjct: 78  GVCLNYEEARALLGRLEYQRGHVEAALRVFDGIDIPALVPKMKISIARKVDRR 130


>tr|A7Q1P5|A7Q1P5_VITVI Chromosome chr7 scaffold_44, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028547001
           PE=4 SV=1
          Length = 732

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +2

Query: 359 MMCACSSEQFKADRD-SIXXXXXXXXXXTSGLSAKTIEGEAKLDEGNIXXXXXXXXXXXX 535
           M C CS E+ +AD+   +           SG S++  E E K D GNI            
Sbjct: 23  MKCLCSGEELRADKMIPLSEILATNDYSASGSSSRAAELEQKQDIGNIEEAESSLRESGC 82

Query: 536 XNYEEARALLGRLEYXRGNVEAALQVFDGIDISTVRSRMKASITSKSSQR 685
            NYEEARALLGR EY +GN+EAAL VF+GIDI+ V  +MK ++  +  +R
Sbjct: 83  LNYEEARALLGRYEYQKGNIEAALHVFEGIDIAAVTPKMKLTLAKRGERR 132


>tr|A7NU93|A7NU93_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014960001
           PE=4 SV=1
          Length = 686

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +2

Query: 359 MMCACSSEQFK-ADRDSIXXXXXXXXXXTSGLSAKTIEGEAKLDEGNIXXXXXXXXXXXX 535
           M+CACS EQFK  D               SGLS++T + E+K ++  +            
Sbjct: 1   MLCACSGEQFKFEDAPRSPESLATRDFSASGLSSRTGDWESKFEDTQVDEAESTLRDALS 60

Query: 536 XNYEEARALLGRLEYXRGNVEAALQVFDGIDISTVRSRMKASITSKSSQR 685
            NYEEARALLGRLEY RGN +AA QVF GIDI  +  RM  +I  ++ QR
Sbjct: 61  LNYEEARALLGRLEYQRGNFDAAFQVFHGIDIRGLTPRMTRAIVERTWQR 110


>tr|Q66GN3|Q66GN3_ARATH At4g28600 OS=Arabidopsis thaliana
           GN=At4g28600 PE=2 SV=1
          Length = 739

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
 Frame = +2

Query: 353 LKMMCACSSEQFK----ADRDSIXXXXXXXXXXTSGLSAKTIEGEAKLDEGNIXXXXXXX 520
           ++M C CS EQ +     D+ S           +S LS    E   KLD GNI       
Sbjct: 23  IRMKCLCSGEQMRHREEEDKKS-EVGVGRDYNGSSALSTAESENAKKLDNGNIEEAELSL 81

Query: 521 XXXXXXNYEEARALLGRLEYXRGNVEAALQVFDGIDISTVRSRMKASITSKSSQR 685
                 NYEEARALLGR+EY +GN+EAAL+VF+GIDI+ +  +MK ++T +  ++
Sbjct: 82  RETSSLNYEEARALLGRIEYQKGNIEAALRVFEGIDINGITVKMKTALTVREDRK 136


>tr|A7P533|A7P533_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032383001
           PE=4 SV=1
          Length = 678

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 43/81 (53%), Positives = 51/81 (62%)
 Frame = +2

Query: 443 SGLSAKTIEGEAKLDEGNIXXXXXXXXXXXXXNYEEARALLGRLEYXRGNVEAALQVFDG 622
           +GL  KT E EAKLDEGNI             N+EEARALLGRLEY RGNVE AL+VFDG
Sbjct: 25  NGLCMKTTEVEAKLDEGNIEEAESSLREGLSLNFEEARALLGRLEYQRGNVEGALRVFDG 84

Query: 623 IDISTVRSRMKASITSKSSQR 685
           ID+     R++ S + +   R
Sbjct: 85  IDLQAAIQRLQPSFSERLHPR 105


>tr|A5BI73|A5BI73_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_000132 PE=4 SV=1
          Length = 556

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 43/81 (53%), Positives = 51/81 (62%)
 Frame = +2

Query: 443 SGLSAKTIEGEAKLDEGNIXXXXXXXXXXXXXNYEEARALLGRLEYXRGNVEAALQVFDG 622
           +GL  KT E EAKLDEGNI             N+EEARALLGRLEY RGNVE AL+VFDG
Sbjct: 25  NGLCMKTTEVEAKLDEGNIEEAESSLREGLSLNFEEARALLGRLEYQRGNVEGALRVFDG 84

Query: 623 IDISTVRSRMKASITSKSSQR 685
           ID+     R++ S + +   R
Sbjct: 85  IDLQAAIQRLQPSFSERLHPR 105


>tr|A5ASV5|A5ASV5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_011972 PE=4 SV=1
          Length = 700

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 43/81 (53%), Positives = 51/81 (62%)
 Frame = +2

Query: 443 SGLSAKTIEGEAKLDEGNIXXXXXXXXXXXXXNYEEARALLGRLEYXRGNVEAALQVFDG 622
           +GL  KT E EAKLDEGNI             N+EEARALLGRLEY RGNVE AL+VFDG
Sbjct: 25  NGLCMKTTEVEAKLDEGNIEEAESSLREGLSLNFEEARALLGRLEYQRGNVEGALRVFDG 84

Query: 623 IDISTVRSRMKASITSKSSQR 685
           ID+     R++ S + +   R
Sbjct: 85  IDLQAAIQRLQPSFSERLHPR 105


>tr|A5BC29|A5BC29_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_018246 PE=4 SV=1
          Length = 753

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = +2

Query: 359 MMCACSSEQFKADRD-SIXXXXXXXXXXTSGLSAKTIEGEAKLDEGNIXXXXXXXXXXXX 535
           M C CS E+ +AD+   +           S  S++  E E K D GNI            
Sbjct: 44  MKCLCSGEELRADKMIPLSEILATNDYSASCSSSRAAELEQKQDIGNIEEAESSLRESGC 103

Query: 536 XNYEEARALLGRLEYXRGNVEAALQVFDGIDISTVRSRMKASITSKSSQR 685
            NYEEARALLGR EY +GN+EAAL VF+GIDI+ V  +MK ++  +  +R
Sbjct: 104 LNYEEARALLGRYEYQKGNIEAALHVFEGIDIAAVTPKMKLTLAKRGERR 153