DK959921 |
Clone id |
TST39A01NGRL0005_P24 |
Library |
TST39 |
Length |
673 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0005_P24. 5' end sequence. |
Accession |
DK959921 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL960Contig1 |
Sequence |
GCTGGTTGACGAAGGAAAGCGTCCGGAGCTCACAGATCACCTCCATCTCTGCAACCATGC AGATATTCGTTAAAACCTTGACCGGTAAGACTATCACCTTAGAGGTTGAGTCCTCTGATA CAATCGTCAATGTGAAAACTAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGC GACTCATTTTCGCTGGAAAACAGCTTGAGGATGGCCGAACTCTAGCCGATTACAACATTC AGAAAGAATCCACCCTTCACCTTGTGCTCAGGTTGAGGGGAGGTGCCAAAAAGAGGAAAA AGAAGACTTACACCAAGCCCAAGAAGCTCAAGCACAAGAAGAAAAAGGTGAAGCTTGCGG CGCTTCAGTTTTACAAGGTGGATGATTCTGGCAAGGTGCAGCGCCTGCGCAAGGAGTGCC CGAATGGGGAGTGTGGTGCCGGGACTTTCATGGCAAATCATCATGATCGACACTACTGTG GCAAGTGTGGTCTTACATATGTTTATCAGAAGGCTTGATTTTGAAATCAATGGCAACAAT TTTGGGTGGAAATGGGGACTTTTACGGCAAACCATCAGGACCGCCATGATTATGACGAGT GTGGGCTTGAATTTTAATTGTCATTCCACAAGATTTTTGTGGTTACCATGTGTGATTTGT TAGTGTGGAGTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P42740 |
Definition |
sp|P42740|UBIQ_AGLNE Ubiquitin OS=Aglaothamnion neglectum |
Align length |
76 |
Score (bit) |
146.0 |
E-value |
8.0e-35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T8M3 |
Definition |
tr|A9T8M3|A9T8M3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
153 |
Score (bit) |
249.0 |
E-value |
8.0e-65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959921|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0005_P24, 5' (673 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T8M3|A9T8M3_PHYPA Predicted protein OS=Physcomitrella paten... 249 8e-65 tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tu... 248 2e-64 tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medic... 248 2e-64 tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Zizip... 248 2e-64 tr|A9RJI9|A9RJI9_PHYPA Predicted protein OS=Physcomitrella paten... 248 2e-64 tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Popul... 248 2e-64 tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromos... 248 2e-64 tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromos... 248 2e-64 tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea bras... 248 2e-64 tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arach... 248 3e-64 tr|Q0MW35|Q0MW35_9ROSA Ubiquitin extension protein OS=Morus bomb... 247 4e-64 tr|Q45FL8|Q45FL8_TOBAC Ubiquitin extension protein OS=Nicotiana ... 247 5e-64 tr|Q2QDG1|Q2QDG1_GOSHI Ubiquitin extension protein OS=Gossypium ... 247 5e-64 tr|A9S8F4|A9S8F4_PHYPA Predicted protein OS=Physcomitrella paten... 247 5e-64 tr|A7Q059|A7Q059_VITVI Chromosome chr8 scaffold_41, whole genome... 247 5e-64 tr|Q6UCJ3|Q6UCJ3_CUCSA Ubiquitin extension protein OS=Cucumis sa... 246 7e-64 tr|Q5EC25|Q5EC25_NICBE Ubiquitin/s27a 40S ribosomal protein OS=N... 246 7e-64 tr|O49906|O49906_TOBAC Ubiquitin extension protein OS=Nicotiana ... 246 7e-64 tr|A5B102|A5B102_VITVI Putative uncharacterized protein OS=Vitis... 246 7e-64 tr|A0MKC8|A0MKC8_CAPAN Ubiquitin extension protein OS=Capsicum a... 246 7e-64 tr|B7FH93|B7FH93_MEDTR Putative uncharacterized protein OS=Medic... 246 9e-64 tr|B3TLP8|B3TLP8_ELAGV Ubiquitin extension protein-like protein ... 246 9e-64 tr|A9P8M2|A9P8M2_POPTR Putative uncharacterized protein OS=Popul... 246 9e-64 tr|Q8W217|Q8W217_PYRCO Ubiquitin extension protein OS=Pyrus comm... 245 2e-63 tr|B8LKJ2|B8LKJ2_PICSI Putative uncharacterized protein OS=Picea... 245 2e-63 tr|A9YTY9|A9YTY9_SOLTU Putative ubiquitin extension protein OS=S... 245 2e-63 tr|Q9FUL5|Q9FUL5_PRUAV Ubiquitin/ribosomal protein 27a OS=Prunus... 244 3e-63 tr|Q84XC3|Q84XC3_MALDO Ubiquitin/ribosomal fusion protein OS=Mal... 243 8e-63 tr|Q0DKI9|Q0DKI9_ORYSJ Os05g0160200 protein (Fragment) OS=Oryza ... 236 7e-61 tr|Q9ARZ9|Q9ARZ9_ORYSJ cDNA clone:001-043-B08, full insert seque... 235 2e-60
>tr|A9T8M3|A9T8M3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168664 PE=4 SV=1 Length = 156
Score = 249 bits (637), Expect = 8e-65 Identities = 127/153 (83%), Positives = 127/153 (83%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKLKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNPECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tuberosum PE=2 SV=1 Length = 156
Score = 248 bits (634), Expect = 2e-64 Identities = 126/153 (82%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 155
Score = 248 bits (634), Expect = 2e-64 Identities = 126/153 (82%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Ziziphus jujuba GN=UBQ PE=2 SV=1 Length = 156
Score = 248 bits (634), Expect = 2e-64 Identities = 126/153 (82%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A9RJI9|A9RJI9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159452 PE=4 SV=1 Length = 155
Score = 248 bits (634), Expect = 2e-64 Identities = 126/153 (82%), Positives = 127/153 (83%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKLKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN +CGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNPDCGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 156
Score = 248 bits (634), Expect = 2e-64 Identities = 126/153 (82%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_174, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00006610001 PE=4 SV=1 Length = 156
Score = 248 bits (634), Expect = 2e-64 Identities = 126/153 (82%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNSECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00028185001 PE=4 SV=1 Length = 156
Score = 248 bits (634), Expect = 2e-64 Identities = 126/153 (82%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea brasiliensis GN=UEP1 PE=2 SV=1 Length = 156
Score = 248 bits (633), Expect = 2e-64 Identities = 126/153 (82%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYKVDDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAILQFYKVDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arachis hypogaea PE=2 SV=1 Length = 155
Score = 248 bits (632), Expect = 3e-64 Identities = 125/153 (81%), Positives = 126/153 (82%) Frame = +3
Query: 57 MQIFVKTLTGKTITLEVESSDTIVNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 236 MQIFVKTLTGKTITLEVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 237 IQKESTLHLVLRLRGGAXXXXXXXXXXXXXXXXXXXXXXLAALQFYKVDDSGKVQRLRKE 416 IQKESTLHLVLRLRGGA LA LQFYK+DDSGKVQRLRKE Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAILQFYKIDDSGKVQRLRKE 120
Query: 417 CPNGECGAGTFMANHHDRHYCGKCGLTYVYQKA 515 CPN ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
|