DK959935 |
Clone id |
TST39A01NGRL0006_A14 |
Library |
TST39 |
Length |
697 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_A14. 5' end sequence. |
Accession |
DK959935 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL108Contig1 |
Sequence |
TTTTCAGAGAGTGCATCTTCTTCTGGCGAAGGAGGCGGCAGCATGGTGCACGTCAGTTTC TACCGCAACTATGGAAAGACGTTCAAGAAGCCCCGCCGTCCTTATGAGAAGGAGCGGCTC GATGCAGAACTGAAGCTCGTAGGGGAATATGGACTCCGTAACAAGAGAGAACTGTGGAGA GTTCAATATGCATTGAGCCGTATCCGCAACAATGCCCGAATGTTGCTTACACTCGATGAG AAGAACCCACGCAGAATCTTCGAGGGAGAGGCTCTTCTACGTCGCATGTTCAGATATGGT CTTCTAGATGAAAGCCAAAACAAGCTCGATTATGTTTTGGCATTGACAGTTGAGAACTTC TTGGAACGCCGTCTGCAGACTCTTGTCTTCAAGTCGGGCATGGCCAAATCGATTCATCAT GCCCGAGTGCTTATCAAGCAGAGGCATATTAGGGTTGGCAAGCAAGTTGTCAATGTTGCC TCTTTTCTGGTGAGAGTGGATTCACAGAAGCATATTGATTTTGCACTGTCGAGTCCCTTC GGTGGCGGTAGACCTGGCCGTGTGAAGAGAAGGAACATGAAGGCTGCCTCTAAGAAGGCT GCTGGTGGTGAAGAGGAGGAGGATGAAGATTAAAGTGACAGAGCTTCTGTTGTTTGAAGT CAAGAAACAAAGAGAGAGACTAGACATTTTTGACTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LXG1 |
Definition |
sp|Q9LXG1|RS91_ARATH 40S ribosomal protein S9-1 OS=Arabidopsis thaliana |
Align length |
178 |
Score (bit) |
325.0 |
E-value |
1.0e-88 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q60CZ2 |
Definition |
tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum |
Align length |
178 |
Score (bit) |
335.0 |
E-value |
2.0e-90 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959935|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_A14, 5' (697 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=So... 335 2e-90 tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genom... 334 3e-90 tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea... 334 4e-90 tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solan... 333 5e-90 tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medic... 332 1e-89 tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Popul... 331 2e-89 tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Popul... 331 2e-89 tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome... 331 2e-89 tr|Q6H8J2|Q6H8J2_CATRO 40S ribosomal protein S9 OS=Catharanthus ... 330 4e-89 tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea... 330 4e-89 tr|A9SLM0|A9SLM0_PHYPA Predicted protein OS=Physcomitrella paten... 330 4e-89 tr|A9RK26|A9RK26_PHYPA Predicted protein OS=Physcomitrella paten... 330 4e-89 tr|A9PJ59|A9PJ59_POPJC Putative uncharacterized protein OS=Popul... 330 5e-89 tr|A9P9U8|A9P9U8_POPTR Putative uncharacterized protein OS=Popul... 330 5e-89 tr|A9TG44|A9TG44_PHYPA Predicted protein OS=Physcomitrella paten... 330 7e-89 tr|A5HSG2|A5HSG2_ARTAN Putative 40S ribosomal protein S9 OS=Arte... 330 7e-89 tr|B3TM27|B3TM27_ELAGV Ribosomal protein OS=Elaeis guineensis va... 329 1e-88 tr|A9RKT7|A9RKT7_PHYPA Predicted protein OS=Physcomitrella paten... 329 1e-88 tr|A9PA82|A9PA82_POPTR Putative uncharacterized protein OS=Popul... 326 8e-88 tr|B3TM34|B3TM34_ELAGV 40S ribosomal protein S9 OS=Elaeis guinee... 324 4e-87 tr|A9S7K2|A9S7K2_PHYPA Predicted protein OS=Physcomitrella paten... 323 8e-87 tr|Q2R1J8|Q2R1J8_ORYSJ 40S ribosomal protein S9, putative, expre... 321 3e-86 tr|A2ZFU3|A2ZFU3_ORYSI Putative uncharacterized protein OS=Oryza... 321 3e-86 tr|Q676Y9|Q676Y9_HYAOR 40S ribosomal protein S9 OS=Hyacinthus or... 320 4e-86 tr|B6SZS2|B6SZS2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 318 3e-85 tr|B6T7B2|B6T7B2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 316 1e-84 tr|B6T8L0|B6T8L0_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 314 4e-84 tr|B6TH64|B6TH64_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 312 1e-83 tr|Q2R1J7|Q2R1J7_ORYSJ 40S ribosomal protein S9, putative, expre... 311 3e-83 tr|A8JGF8|A8JGF8_CHLRE Ribosomal protein S9, component of cytoso... 309 1e-82
>tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum GN=SDM1_52t00012 PE=3 SV=1 Length = 197
Score = 335 bits (858), Expect = 2e-90 Identities = 167/178 (93%), Positives = 175/178 (98%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 576 AKSIHHARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence (Chromosome chr17 scaffold_101, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00000124001 PE=3 SV=1 Length = 197
Score = 334 bits (857), Expect = 3e-90 Identities = 166/178 (93%), Positives = 173/178 (97%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEKNPRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 576 AKSIHHARVLI+QRHIRVG+QVVN+ SFLVR+DSQKHIDF+L+SP GGGRPGRVKR+N Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFLVRMDSQKHIDFSLTSPLGGGRPGRVKRKN 178
>tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 334 bits (856), Expect = 4e-90 Identities = 165/179 (92%), Positives = 174/179 (97%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARM Sbjct: 1 MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEKNPRRIFEGEALLRRM RYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 579 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+NM Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNM 179
>tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 197
Score = 333 bits (855), Expect = 5e-90 Identities = 166/178 (93%), Positives = 175/178 (98%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 576 AKSIHHARVLI+QRHIRVG+QVVNVASF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 197
Score = 332 bits (852), Expect = 1e-89 Identities = 163/179 (91%), Positives = 175/179 (97%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRNNAR Sbjct: 1 MVHVAFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNART 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEKNPRRIFEGEALLRRMF++GLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 579 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGG PGRVKR+N+ Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNL 179
>tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 197
Score = 331 bits (849), Expect = 2e-89 Identities = 165/178 (92%), Positives = 173/178 (97%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 576 AKSIHHARVLIKQRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 121 AKSIHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 197
Score = 331 bits (849), Expect = 2e-89 Identities = 165/178 (92%), Positives = 173/178 (97%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRN 576 AKSIHHARVLIKQRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SPFGGGRPGRVKR+N Sbjct: 121 AKSIHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178
>tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037003001 PE=3 SV=1 Length = 197
Score = 331 bits (849), Expect = 2e-89 Identities = 164/179 (91%), Positives = 173/179 (96%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEKNPRRIFEGEALLRRM +YGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNKYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 579 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRV+SQKHIDFA +SP GGGRPGRVKR+N+ Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVESQKHIDFANTSPLGGGRPGRVKRKNL 179
>tr|Q6H8J2|Q6H8J2_CATRO 40S ribosomal protein S9 OS=Catharanthus roseus GN=rps9 PE=2 SV=1 Length = 197
Score = 330 bits (847), Expect = 4e-89 Identities = 165/179 (92%), Positives = 172/179 (96%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRN AR Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNAARN 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEK+PRRIFEGEALLRRM RYGLLDE QNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKDPRRIFEGEALLRRMNRYGLLDEGQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 579 AKSIHHARVLI+QRHIRVGKQVVNV SF+VRVDSQKHIDF+++SPFGGGRPGRVKR+NM Sbjct: 121 AKSIHHARVLIRQRHIRVGKQVVNVPSFMVRVDSQKHIDFSITSPFGGGRPGRVKRKNM 179
>tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 330 bits (847), Expect = 4e-89 Identities = 163/179 (91%), Positives = 173/179 (96%) Frame = +1
Query: 43 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 222 MVHV FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARM Sbjct: 1 MVHVVFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARM 60
Query: 223 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 402 LLTLDEKNPRRIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQSKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 403 AKSIHHARVLIKQRHIRVGKQVVNVASFLVRVDSQKHIDFALSSPFGGGRPGRVKRRNM 579 AKSIHHARVLI+QRHIRVG+QVVN+ SF+VRVDSQKHIDF+L+SP GGGRPGRVKR+N+ Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 179
|