DK959937 |
Clone id |
TST39A01NGRL0006_A16 |
Library |
TST39 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_A16. 5' end sequence. |
Accession |
DK959937 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL42Contig1 |
Sequence |
ATTTGATTGGGGGTCTGCTCTTCTGACGCGTTTAGGGTTTCGCTACTGCTGTTAGGGTTT CTCCACGTGCCATCGTGATTTAGTTCGAGCTACCGTAATTCGGTCTTGTAGATCACTACA GAATTTCCGTATCGACGCGAGGTTTTGGGACACAGCAGATCTCTCTCGTTCTACTTCAGA TCTGTGTCCAGGAGCTAAGCGAGCTCAGGATTGATGGAGAATATTTATTCTTTCTGGAGT CTAAATGACAATAATCGGCGCTCTCCCACTGAGATGCAAGAGGATCAAAGCTGGAAAGTA GCAGCTACCAAGCTTGCTTTTGCGGATCAGATGAGGCTGAAGTTTGATAGGTCTAGATCT GATGCGAAGGTTGTGGCCCCTCATGAGAAGAACATTAAACAAGCAAAGGGACGATCCAAG GGCAGAGCTGAAGACATGCTGAAGGGGGAAGGTTTCAACCAGAAGTTTTCGGATGGGGAT TTGAGATATGGAGATTTGGGTCAGAAGCTTGGAGCAGGTAACATGTCAACATCACAGATT GTTGGCAGTGCAGATAAACGATTCAAGTCTCTTCCGCCTGCTGAAACACTTCCTAGACAC GAAACTTTGGGTGGCTACATATTTGTCTGCAACAATGATACCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37707 |
Definition |
sp|P37707|B2_DAUCA B2 protein OS=Daucus carota |
Align length |
43 |
Score (bit) |
63.5 |
E-value |
9.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQZ7 |
Definition |
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
164 |
Score (bit) |
91.7 |
E-value |
4.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959937|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_A16, 5' (644 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 92 4e-17 tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 79 2e-13 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 77 9e-13 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 76 2e-12 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 75 3e-12 tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/... 71 6e-11 tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P... 71 6e-11 tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul... 64 6e-09 tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella paten... 64 1e-08 tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 63 1e-08 tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08 tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromos... 62 3e-08 tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g4205... 62 3e-08 tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m... 62 3e-08 tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ... 61 7e-08 tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m... 59 2e-07 tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2... 59 3e-07 tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella paten... 59 3e-07 tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs... 59 3e-07 tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza... 59 3e-07 tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 59 3e-07 tr|A3B5I3|A3B5I3_ORYSJ Putative uncharacterized protein OS=Oryza... 59 3e-07 tr|Q5JK83|Q5JK83_ORYSJ cDNA clone:001-207-H09, full insert seque... 56 2e-06 tr|Q5JK82|Q5JK82_ORYSJ Putative GDA2 protein (Os01g0550300 prote... 56 2e-06 tr|B8AA12|B8AA12_ORYSI Putative uncharacterized protein OS=Oryza... 56 2e-06 tr|A2ZU93|A2ZU93_ORYSJ Putative uncharacterized protein OS=Oryza... 56 2e-06 tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1 55 5e-06 tr|B7ZZ36|B7ZZ36_MAIZE Putative uncharacterized protein OS=Zea m... 54 8e-06 tr|B7ZYQ7|B7ZYQ7_MAIZE Putative uncharacterized protein OS=Zea m... 54 8e-06 tr|B4F858|B4F858_MAIZE Putative uncharacterized protein OS=Zea m... 54 8e-06
>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 91.7 bits (226), Expect = 4e-17 Identities = 61/164 (37%), Positives = 80/164 (48%), Gaps = 21/164 (12%) Frame = +1
Query: 214 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 393 M N YSFW + R +D W +AA++LA A+ R K DR+ +P E Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58
Query: 394 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 516 + KG+ KG++E L+ N K + D + GD G K GA Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116
Query: 517 --GNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 642 N + S + DKRFK+LP E LPR+E LGGYIFVCNNDT Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTEMLPRNEILGGYIFVCNNDT 160
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 79.0 bits (193), Expect = 2e-13 Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 14/157 (8%) Frame = +1
Query: 214 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 393 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 394 IKQAKGRSKGRAEDMLKGEGFNQ--KFSDGDLRYG------DLGQKLGAGNMSTSQIVG- 546 +K G+S G+ E++ + FN K ++ + G ++ + N +TS Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114
Query: 547 -----SADKRFKSLPPAETLPRHETLGGYIFVCNNDT 642 S +KRFK+LP +E LPR+E LGGYIFVCNNDT Sbjct: 115 NYNNNSFEKRFKTLPSSEMLPRNEILGGYIFVCNNDT 151
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 77.0 bits (188), Expect = 9e-13 Identities = 61/182 (33%), Positives = 81/182 (44%), Gaps = 39/182 (21%) Frame = +1
Query: 214 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 393 M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56
Query: 394 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 531 + G + D L F + S LR G QK AGNM++ Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116
Query: 532 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 636 ++ G+ DKRFK+LP AETLPR+E LGGYIFVCNN Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNN 176
Query: 637 DT 642 DT Sbjct: 177 DT 178
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 75.9 bits (185), Expect = 2e-12 Identities = 57/180 (31%), Positives = 79/180 (43%), Gaps = 37/180 (20%) Frame = +1
Query: 214 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 381 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A++ P Sbjct: 1 MENMQSYWQFGDE-LRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAEI-RP 58
Query: 382 HEKNI-------------------KQAKGRSKGRAEDMLK--------------GEGFNQ 462 ++ K + SK R D + G Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118
Query: 463 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 642 KF+ + Y K N+ ++ S DKRFK+LP AETLP++E LGGYIFVCNNDT Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAETLPKNEVLGGYIFVCNNDT 176
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 75.5 bits (184), Expect = 3e-12 Identities = 64/195 (32%), Positives = 84/195 (43%), Gaps = 52/195 (26%) Frame = +1
Query: 214 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 393 M+N++SFW L D R + EDQSW AA++LA +Q R K +R N Sbjct: 1 MDNMHSFWQLGDE-LRGQSRTSEDQSWLRAASRLA--EQTRFKGERMN-----------N 46
Query: 394 IKQAKGRSKGRAEDML------KGEGFNQKFS-------------DGDLRYG-------- 492 + +KG ++ R D + E FN F+ LR G Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106
Query: 493 ------DLGQ----KLGAGNMST---------------SQIVGSADKRFKSLPPAETLPR 597 ++G K G N+S S + DKRFK+LP ETLPR Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATETLPR 166
Query: 598 HETLGGYIFVCNNDT 642 +E LGGYIFVCNNDT Sbjct: 167 NEVLGGYIFVCNNDT 181
>tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/MOJ10_18) OS=Arabidopsis thaliana GN=At3g27090 PE=2 SV=1 Length = 296
Score = 70.9 bits (172), Expect = 6e-11 Identities = 56/182 (30%), Positives = 75/182 (41%), Gaps = 44/182 (24%) Frame = +1
Query: 229 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 375 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 376 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 531 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 532 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 636 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 637 DT 642 DT Sbjct: 172 DT 173
>tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 296
Score = 70.9 bits (172), Expect = 6e-11 Identities = 56/182 (30%), Positives = 75/182 (41%), Gaps = 44/182 (24%) Frame = +1
Query: 229 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 375 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 376 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 531 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 532 SQIVGS-------------------------ADKRFKSLPPAETLPRHETLGGYIFVCNN 636 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNIVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 637 DT 642 DT Sbjct: 172 DT 173
>tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 390
Score = 64.3 bits (155), Expect = 6e-09 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 7/57 (12%) Frame = +1
Query: 493 DLGQKLGAGNMS-------TSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 642 D G K G N + + +ADKRFK+LPP+E+LPR+ET+GGYIFVCNNDT Sbjct: 212 DFGSKSGKKNSNKKSNSNDNNDNKSAADKRFKTLPPSESLPRYETIGGYIFVCNNDT 268
>tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113222 PE=4 SV=1 Length = 174
Score = 63.5 bits (153), Expect = 1e-08 Identities = 29/36 (80%), Positives = 31/36 (86%) Frame = +1
Query: 535 QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 642 QI + DKRFKSLPPAE LPR+ TLGGYIFVCNNDT Sbjct: 12 QITVNPDKRFKSLPPAEILPRNTTLGGYIFVCNNDT 47
>tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 Length = 301
Score = 63.2 bits (152), Expect = 1e-08 Identities = 53/178 (29%), Positives = 74/178 (41%), Gaps = 40/178 (22%) Frame = +1
Query: 229 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAF-----ADQMRLKFDRSRSDAKVVAPHEKN 393 S W L D R P ++ ED+ W + +KLA ++M D + D H+ + Sbjct: 3 SLWHLGDELRGQP-KVVEDRQWSLMTSKLAEITRSKGERMNTVPDAKQWDKTSYQLHDDS 61
Query: 394 ---------------IKQA-------KGRSKGRAEDMLKGEGFNQKFSDGDLRYG----- 492 + +A +G + LKG N + + G Sbjct: 62 RMGHINLGLMNLDLKMNEAAAMKLPFRGMPYNMNQMYLKGSNANSNVNAFKMNVGVNKYS 121
Query: 493 ------DLGQKLGAGNMSTSQIVGS--ADKRFKSLPPAETLPRHETLGGYIFVCNNDT 642 D K GN + G+ ADKRFK+LP +E LPR+E LGGYIFVCNNDT Sbjct: 122 NSPNGKDANGKNNGGNNNNGSANGTSVADKRFKTLPTSEMLPRNEVLGGYIFVCNNDT 179
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