DK959956 |
Clone id |
TST39A01NGRL0006_B13 |
Library |
TST39 |
Length |
660 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_B13. 5' end sequence. |
Accession |
DK959956 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1615Contig1 |
Sequence |
CGGCGATGGCGATCAGCTTGGCCAACAACGTCTGTGCATTCGTGGCCCCTAGCTCTAAGT GCAGCTCCTCACCCCGCTCAGCAGGCTTTGTGGAGAACAGGCGGCGATGGTGCAGAGGAT GGCGCCCCACACGGGATGCCCGAAACCTCGGTGTTCGAGTGGAATCACCATCAGACGGCA GAGATTCCTCGTCTTCTGTAGCTGTGACAACAGCTGAGAGATCAGAAGCAGACAGGTTAG TCGATGGGATGTCATTTGGGGAGCTTTGTGATGAGTTTCAATGCATTAGCAGTCCTGCCG TGGAGGCAACAGCCAGACAATTGGCAAGGGACATCCTGGAGTTGAGAGAGGGTAATCGAG CATTGGGAACTTTTGCTATCTCTGTAAAATATAAGGATCCACTGCGTTCATTTACGGGTC GAGATAAGTACAAAAGGCCCTCATGGATAGCAGGTGCCTTAGACAAGCCGTCAGTGGCGG TGCGTGAAATGGTGATGCAGTCGACAAGCGTGTTAATCATCAAATGGGTCTTGCGAGGCA AGCCCAAGATACCCGGGCCAGAACTAGTCCTAGCCATCAATGACACCTTTACTCTCAATC AAATAAGTGGACAGGTGGTGGAGCATGTGCAAGAGTGGGATTTGTCGCGCTCCTCTCCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7MNF8 |
Definition |
sp|Q7MNF8|HSCA_VIBVY Chaperone protein hscA homolog OS=Vibrio vulnificus (strain YJ016) |
Align length |
49 |
Score (bit) |
32.7 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5B3D0 |
Definition |
tr|A5B3D0|A5B3D0_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
152 |
Score (bit) |
222.0 |
E-value |
2.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK959956|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_B13, 5' (660 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5B3D0|A5B3D0_VITVI Putative uncharacterized protein OS=Vitis... 222 2e-56 tr|A9TEG2|A9TEG2_PHYPA Predicted protein (Fragment) OS=Physcomit... 209 9e-53 tr|A9SNV9|A9SNV9_PHYPA Predicted protein OS=Physcomitrella paten... 207 5e-52 tr|Q5N7X2|Q5N7X2_ORYSJ cDNA clone:J013155P10, full insert sequen... 203 7e-51 tr|B8A843|B8A843_ORYSI Putative uncharacterized protein OS=Oryza... 203 7e-51 tr|A3A0U0|A3A0U0_ORYSJ Putative uncharacterized protein OS=Oryza... 203 7e-51 tr|A7PV52|A7PV52_VITVI Chromosome chr4 scaffold_32, whole genome... 202 1e-50 tr|Q9S9K3|Q9S9K3_ARATH T23K8.14 protein OS=Arabidopsis thaliana ... 199 1e-49 tr|Q8L604|Q8L604_ARATH Putative uncharacterized protein At1g6523... 199 1e-49 tr|B4FIL4|B4FIL4_MAIZE Putative uncharacterized protein OS=Zea m... 198 3e-49 tr|B4FIF9|B4FIF9_MAIZE Putative uncharacterized protein OS=Zea m... 86 3e-15 tr|B4FGR2|B4FGR2_MAIZE Putative uncharacterized protein OS=Zea m... 84 6e-15 tr|A8IVH2|A8IVH2_CHLRE Predicted protein OS=Chlamydomonas reinha... 84 1e-14 tr|B6SGV4|B6SGV4_MAIZE Putative uncharacterized protein OS=Zea m... 82 4e-14 tr|Q00YK5|Q00YK5_OSTTA Homology to unknown gene OS=Ostreococcus ... 79 2e-13 tr|A4S522|A4S522_OSTLU Predicted protein OS=Ostreococcus lucimar... 78 6e-13 tr|B6T8V7|B6T8V7_MAIZE Putative uncharacterized protein OS=Zea m... 75 5e-12 tr|B6KHR3|B6KHR3_TOXGO Putative uncharacterized protein OS=Toxop... 40 0.097 tr|Q8YY98|Q8YY98_ANASP Alr0953 protein OS=Anabaena sp. (strain P... 40 0.13 tr|B0CDV7|B0CDV7_ACAM1 Putative uncharacterized protein OS=Acary... 40 0.13 tr|A3IXL6|A3IXL6_9CHRO Putative uncharacterized protein OS=Cyano... 40 0.17 tr|Q7NHQ0|Q7NHQ0_GLOVI Glr2485 protein OS=Gloeobacter violaceus ... 39 0.22 tr|Q4C2B1|Q4C2B1_CROWT Putative uncharacterized protein OS=Croco... 39 0.22 tr|B8HMI6|B8HMI6_9CHRO Putative uncharacterized protein OS=Cyano... 39 0.22 tr|B2IUZ9|B2IUZ9_NOSP7 Putative uncharacterized protein OS=Nosto... 39 0.28 tr|A7QMI6|A7QMI6_VITVI Chromosome chr19 scaffold_126, whole geno... 39 0.28 tr|B1WUH0|B1WUH0_CYAA5 Putative uncharacterized protein OS=Cyano... 38 0.48 tr|Q3MFT1|Q3MFT1_ANAVT Putative uncharacterized protein OS=Anaba... 38 0.63 tr|B4WMT2|B4WMT2_9SYNE Putative uncharacterized protein OS=Synec... 38 0.63 tr|Q9SA31|Q9SA31_ARATH F3O9.12 protein (At1g16320/F3O9_12) OS=Ar... 38 0.63
>tr|A5B3D0|A5B3D0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020863 PE=4 SV=1 Length = 298
Score = 222 bits (565), Expect = 2e-56 Identities = 109/152 (71%), Positives = 128/152 (84%), Gaps = 4/152 (2%) Frame = +3
Query: 213 AERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKY 392 +ERSEAD++VDGM FGELC+EF+CISSP VE+TARQLARDILELREGNRALGTFA+SVKY Sbjct: 61 SERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARDILELREGNRALGTFAVSVKY 120
Query: 393 KDPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPK----IPGP 560 KDP+RSFTGR+KYKR W+ ALD PSV V+EMVM STSVL IKW ++GKPK G Sbjct: 121 KDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSVLSIKWTIKGKPKSLLASIGG 180
Query: 561 ELVLAINDTFTLNQISGQVVEHVQEWDLSRSS 656 +L++ +N FTLNQISGQV+EH + WDLS SS Sbjct: 181 DLIIRVNSQFTLNQISGQVIEHEEFWDLSASS 212
>tr|A9TEG2|A9TEG2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144264 PE=4 SV=1 Length = 237
Score = 209 bits (533), Expect = 9e-53 Identities = 101/153 (66%), Positives = 125/153 (81%), Gaps = 5/153 (3%) Frame = +3
Query: 216 ERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYK 395 E++E DRL++G+SFG+LCDEF+CISSPAVE TARQL +DI++LREG R+L +F ++VKYK Sbjct: 1 EKTEVDRLMEGLSFGQLCDEFECISSPAVEKTARQLVKDIMDLREGRRSLSSFGVNVKYK 60
Query: 396 DPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPKIP-----GP 560 DPLRSF GRDKY+ +WI+ AL+KPSVAVREM M STSVL IKW L G PK+P G Sbjct: 61 DPLRSFKGRDKYRSANWISTALEKPSVAVREMKMLSTSVLNIKWTLTGTPKLPPASALGG 120
Query: 561 ELVLAINDTFTLNQISGQVVEHVQEWDLSRSSP 659 ++VLA+N TFT+NQISGQVV H +WDLS S P Sbjct: 121 KVVLAVNSTFTMNQISGQVVLHEDQWDLSASDP 153
>tr|A9SNV9|A9SNV9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_132914 PE=4 SV=1 Length = 271
Score = 207 bits (527), Expect = 5e-52 Identities = 101/155 (65%), Positives = 123/155 (79%), Gaps = 5/155 (3%) Frame = +3
Query: 210 TAERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVK 389 TAE++E DRL+DG+SFG+LCDEF+CISSPAVE TARQL +DI++LREG R+L F ++V+ Sbjct: 30 TAEKTEVDRLMDGLSFGQLCDEFECISSPAVERTARQLVKDIIDLREGERSLSNFGVNVE 89
Query: 390 YKDPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPKIP----- 554 YKDPLRSF GRDKYK +WI AL+KP+VAVREM M STSVL IKW + G PK+P Sbjct: 90 YKDPLRSFKGRDKYKGANWIKTALEKPTVAVREMKMISTSVLKIKWTVTGTPKLPPASAL 149
Query: 555 GPELVLAINDTFTLNQISGQVVEHVQEWDLSRSSP 659 G +VLA++ TFT+NQISGQV H EWDLS S P Sbjct: 150 GGRVVLAVSSTFTMNQISGQVTLHEDEWDLSASDP 184
>tr|Q5N7X2|Q5N7X2_ORYSJ cDNA clone:J013155P10, full insert sequence OS=Oryza sativa subsp. japonica GN=P0470A12.30 PE=2 SV=1 Length = 312
Score = 203 bits (517), Expect = 7e-51 Identities = 99/153 (64%), Positives = 120/153 (78%), Gaps = 5/153 (3%) Frame = +3
Query: 216 ERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYK 395 ERS+ D+LVDGM FGELC++F+CISSP VEATARQLARDIL+LR+ NRA +A+SVKYK Sbjct: 73 ERSQTDKLVDGMDFGELCNDFECISSPYVEATARQLARDILDLRDDNRAFTCYAVSVKYK 132
Query: 396 DPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPKIP-----GP 560 DP+R+F GR+KYKRP WI AL+ P+V V+EM MQSTS L IKW RGKPK P G Sbjct: 133 DPVRTFVGREKYKRPLWITKALENPTVTVQEMSMQSTSNLTIKWTFRGKPKNPIFATIGG 192
Query: 561 ELVLAINDTFTLNQISGQVVEHVQEWDLSRSSP 659 +L++++ F LNQISGQV+E V WDLS SSP Sbjct: 193 DLIVSVTSQFVLNQISGQVLEQVDSWDLSASSP 225
>tr|B8A843|B8A843_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04885 PE=4 SV=1 Length = 312
Score = 203 bits (517), Expect = 7e-51 Identities = 99/153 (64%), Positives = 120/153 (78%), Gaps = 5/153 (3%) Frame = +3
Query: 216 ERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYK 395 ERS+ D+LVDGM FGELC++F+CISSP VEATARQLARDIL+LR+ NRA +A+SVKYK Sbjct: 73 ERSQTDKLVDGMDFGELCNDFECISSPYVEATARQLARDILDLRDDNRAFTCYAVSVKYK 132
Query: 396 DPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPKIP-----GP 560 DP+R+F GR+KYKRP WI AL+ P+V V+EM MQSTS L IKW RGKPK P G Sbjct: 133 DPVRTFVGREKYKRPLWITKALENPTVTVQEMSMQSTSNLTIKWTFRGKPKNPIFATIGG 192
Query: 561 ELVLAINDTFTLNQISGQVVEHVQEWDLSRSSP 659 +L++++ F LNQISGQV+E V WDLS SSP Sbjct: 193 DLIVSVTSQFVLNQISGQVLEQVDSWDLSASSP 225
>tr|A3A0U0|A3A0U0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004412 PE=4 SV=1 Length = 329
Score = 203 bits (517), Expect = 7e-51 Identities = 99/153 (64%), Positives = 120/153 (78%), Gaps = 5/153 (3%) Frame = +3
Query: 216 ERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYK 395 ERS+ D+LVDGM FGELC++F+CISSP VEATARQLARDIL+LR+ NRA +A+SVKYK Sbjct: 90 ERSQTDKLVDGMDFGELCNDFECISSPYVEATARQLARDILDLRDDNRAFTCYAVSVKYK 149
Query: 396 DPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPKIP-----GP 560 DP+R+F GR+KYKRP WI AL+ P+V V+EM MQSTS L IKW RGKPK P G Sbjct: 150 DPVRTFVGREKYKRPLWITKALENPTVTVQEMSMQSTSNLTIKWTFRGKPKNPIFATIGG 209
Query: 561 ELVLAINDTFTLNQISGQVVEHVQEWDLSRSSP 659 +L++++ F LNQISGQV+E V WDLS SSP Sbjct: 210 DLIVSVTSQFVLNQISGQVLEQVDSWDLSASSP 242
>tr|A7PV52|A7PV52_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025052001 PE=4 SV=1 Length = 226
Score = 202 bits (515), Expect = 1e-50 Identities = 100/140 (71%), Positives = 116/140 (82%), Gaps = 4/140 (2%) Frame = +3
Query: 249 MSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYKDPLRSFTGRDK 428 M FGELC+EF+CISSP VE+TARQLARDILELREGNRALGTFA+SVKYKDP+RSFTGR+K Sbjct: 1 MDFGELCNEFECISSPLVESTARQLARDILELREGNRALGTFAVSVKYKDPVRSFTGREK 60
Query: 429 YKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPK----IPGPELVLAINDTFTL 596 YKR W+ ALD PSV V+EMVM STSVL IKW ++GKPK G +L++ +N FTL Sbjct: 61 YKRRLWVTDALDDPSVTVQEMVMLSTSVLSIKWTIKGKPKSLLASIGGDLIIRVNSQFTL 120
Query: 597 NQISGQVVEHVQEWDLSRSS 656 NQISGQV+EH + WDLS SS Sbjct: 121 NQISGQVIEHEEFWDLSASS 140
>tr|Q9S9K3|Q9S9K3_ARATH T23K8.14 protein OS=Arabidopsis thaliana GN=T23K8.14 PE=4 SV=1 Length = 218
Score = 199 bits (506), Expect = 1e-49 Identities = 95/152 (62%), Positives = 118/152 (77%), Gaps = 4/152 (2%) Frame = +3
Query: 216 ERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYK 395 ++SE D+LVD + FGELC++F+C SSP VE+TARQL RDILE+REGNRA +A+SVKYK Sbjct: 12 DKSEVDKLVDKIDFGELCNDFECTSSPQVESTARQLVRDILEIREGNRAFACYAVSVKYK 71
Query: 396 DPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPK----IPGPE 563 DP+RSFTGR+KYKRP WI L+ P+V V+EMVM STSVL IKW ++GKPK + Sbjct: 72 DPVRSFTGREKYKRPMWITSGLENPTVTVQEMVMLSTSVLRIKWTVKGKPKSILAAVSGD 131
Query: 564 LVLAINDTFTLNQISGQVVEHVQEWDLSRSSP 659 L++ + FTLNQISGQV EH + WDLS SSP Sbjct: 132 LIVKVKSEFTLNQISGQVFEHEESWDLSSSSP 163
>tr|Q8L604|Q8L604_ARATH Putative uncharacterized protein At1g65230 OS=Arabidopsis thaliana GN=At1g65230 PE=2 SV=1 Length = 286
Score = 199 bits (506), Expect = 1e-49 Identities = 95/152 (62%), Positives = 118/152 (77%), Gaps = 4/152 (2%) Frame = +3
Query: 216 ERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYK 395 ++SE D+LVD + FGELC++F+C SSP VE+TARQL RDILE+REGNRA +A+SVKYK Sbjct: 51 DKSEVDKLVDKIDFGELCNDFECTSSPQVESTARQLVRDILEIREGNRAFACYAVSVKYK 110
Query: 396 DPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPK----IPGPE 563 DP+RSFTGR+KYKRP WI L+ P+V V+EMVM STSVL IKW ++GKPK + Sbjct: 111 DPVRSFTGREKYKRPMWITSGLENPTVTVQEMVMLSTSVLRIKWTVKGKPKSILAAVSGD 170
Query: 564 LVLAINDTFTLNQISGQVVEHVQEWDLSRSSP 659 L++ + FTLNQISGQV EH + WDLS SSP Sbjct: 171 LIVKVKSEFTLNQISGQVFEHEESWDLSSSSP 202
>tr|B4FIL4|B4FIL4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 302
Score = 198 bits (503), Expect = 3e-49 Identities = 96/152 (63%), Positives = 117/152 (76%), Gaps = 5/152 (3%) Frame = +3
Query: 216 ERSEADRLVDGMSFGELCDEFQCISSPAVEATARQLARDILELREGNRALGTFAISVKYK 395 ERSE D++VDGM FGELC +F+CISSP VE+TARQ+ARDILELRE NRA +A+SVKYK Sbjct: 62 ERSETDKMVDGMDFGELCSDFECISSPYVESTARQVARDILELREDNRAFNCYAVSVKYK 121
Query: 396 DPLRSFTGRDKYKRPSWIAGALDKPSVAVREMVMQSTSVLIIKWVLRGKPKIP-----GP 560 DPLR+F GR+KY+RP WI AL+ P V V+EM MQSTS L I+W LRGKPK P G Sbjct: 122 DPLRTFVGREKYRRPLWITKALENPVVTVQEMSMQSTSNLTIRWALRGKPKNPLFASVGG 181
Query: 561 ELVLAINDTFTLNQISGQVVEHVQEWDLSRSS 656 ++++ + F LNQISGQV+E + WDLS SS Sbjct: 182 DVIVRVESRFVLNQISGQVLEQAESWDLSASS 213
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