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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK959987
Clone id TST39A01NGRL0006_C21
Library
Length 640
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_C21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCCATCTCCAGCAGGTCGATGGCGCCGCGTGCCTCAGCGCAAAAGGTACTTACCCAGGAT
GAGCTAAAGATGATGGCAGCTGACAAGGCTGTGGAGTATGTGAAGAGCGGGATGGTTTTG
GGATTGGGAACAGGATCTACAGCAGCATTTGTTGTTGCCAAAATTGGGCAACTTCTTAAG
GAGGGAAAACTCAAGGACATTGTCGGTGTTCCGACATCCAAGCGGACAGAAGAACAAGCG
GCATCACTTGGAATTCCCCTTTCAGTGCTGGATGATCATCCTAAGATTGATCTGGCTATT
GATGGTGCTGATGAGGTCGATCCAGATCTCAACTTGGTGAAAGGAAGAGGAGGAGCTCTT
CTACGTGAGAAGATGGTTGAAGCAGCGTCAGCAAAGTTCGTTGTAGTCGTGGATGAGACA
AAGCTGGTAGATGGTCTAGGTGGCAGTCAGCTGGCCATGCCAGTTGAAATAGTGCAGTTT
TGCTGGAAATATAATGCGGAAAGACTGAAGAATCTACCAGAGGTTGCCGGCTGTGAGGCC
AAATTAAGGATGGATGGAGACAAGCCCTATGTTACCGATAACTCCAACTATATTGTCGAT
CTCTATTTCAAGTCACCCATAAAGGATGCCCGGGCAGCAG
■■Homology search results ■■ -
sp_hit_id Q9ZU38
Definition sp|Q9ZU38|RPIA_ARATH Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana
Align length 197
Score (bit) 261.0
E-value 3.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959987|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_C21, 5'
         (626 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZU38|RPIA_ARATH Probable ribose-5-phosphate isomerase OS=Ar...   261   3e-69
sp|Q9V0L6|RPIA_PYRAB Ribose-5-phosphate isomerase A OS=Pyrococcu...   168   2e-41
sp|A5VI94|RPIA_LACRD Ribose-5-phosphate isomerase A OS=Lactobaci...   166   7e-41
sp|Q6HHU6|RPIA_BACHK Ribose-5-phosphate isomerase A OS=Bacillus ...   166   7e-41
sp|Q81PL1|RPIA_BACAN Ribose-5-phosphate isomerase A OS=Bacillus ...   166   7e-41
sp|Q63AF7|RPIA_BACCZ Ribose-5-phosphate isomerase A OS=Bacillus ...   166   9e-41
sp|A7NNA4|RPIA_ROSCS Ribose-5-phosphate isomerase A OS=Roseiflex...   164   4e-40
sp|Q5JH26|RPIA_PYRKO Ribose-5-phosphate isomerase A OS=Pyrococcu...   164   4e-40
sp|A7HS32|RPIA_PARL1 Ribose-5-phosphate isomerase A OS=Parvibacu...   163   6e-40
sp|Q8DZC6|RPIA_STRA5 Ribose-5-phosphate isomerase A OS=Streptoco...   163   8e-40
sp|Q8E4Y6|RPIA_STRA3 Ribose-5-phosphate isomerase A OS=Streptoco...   163   8e-40
sp|Q81CG8|RPIA_BACCR Ribose-5-phosphate isomerase A OS=Bacillus ...   163   8e-40
sp|Q7VA25|RPIA_PROMA Ribose-5-phosphate isomerase A OS=Prochloro...   161   2e-39
sp|Q72J47|RPIA_THET2 Ribose-5-phosphate isomerase A OS=Thermus t...   161   3e-39
sp|O50083|RPIA_PYRHO Ribose-5-phosphate isomerase A OS=Pyrococcu...   161   3e-39
sp|Q3K0S0|RPIA_STRA1 Ribose-5-phosphate isomerase A OS=Streptoco...   160   4e-39
sp|Q736S8|RPIA_BACC1 Ribose-5-phosphate isomerase A OS=Bacillus ...   160   6e-39
sp|Q5SIR5|RPIA_THET8 Ribose-5-phosphate isomerase A OS=Thermus t...   159   8e-39
sp|Q1GF74|RPIA_SILST Ribose-5-phosphate isomerase A OS=Silicibac...   159   8e-39
sp|Q28MH0|RPIA_JANSC Ribose-5-phosphate isomerase A OS=Jannaschi...   159   1e-38
sp|Q3STA8|RPIA_NITWN Ribose-5-phosphate isomerase A OS=Nitrobact...   157   4e-38
sp|Q8DJF2|RPIA_THEEB Ribose-5-phosphate isomerase A OS=Thermosyn...   155   1e-37
sp|Q5LZM5|RPIA_STRT1 Ribose-5-phosphate isomerase A OS=Streptoco...   155   1e-37
sp|Q3AHX1|RPIA_SYNSC Ribose-5-phosphate isomerase A OS=Synechoco...   155   2e-37
sp|Q7U8K8|RPIA_SYNPX Ribose-5-phosphate isomerase A OS=Synechoco...   155   2e-37
sp|Q03KJ8|RPIA_STRTD Ribose-5-phosphate isomerase A OS=Streptoco...   155   2e-37
sp|Q5M481|RPIA_STRT2 Ribose-5-phosphate isomerase A OS=Streptoco...   155   2e-37
sp|A5UXC5|RPIA_ROSS1 Ribose-5-phosphate isomerase A OS=Roseiflex...   155   2e-37
sp|A2RF13|RPIA_STRPG Ribose-5-phosphate isomerase A OS=Streptoco...   155   2e-37
sp|Q1J737|RPIA_STRPF Ribose-5-phosphate isomerase A OS=Streptoco...   155   2e-37

>sp|Q9ZU38|RPIA_ARATH Probable ribose-5-phosphate isomerase
           OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1
          Length = 265

 Score =  261 bits (666), Expect = 3e-69
 Identities = 132/197 (67%), Positives = 165/197 (83%), Gaps = 1/197 (0%)
 Frame = +2

Query: 35  LTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRT 214
           LTQDELK +AA KAVE+V+SGMVLGLGTGSTA   V +IG+LL++GKL++IVG+PTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 215 EEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVV 394
           +EQA SLGIPLS LD HP IDL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KFVV+
Sbjct: 91  QEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVI 150

Query: 395 VDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRM-DGDKPYVTDNS 571
           VD++K+V  +GGS+LA+PVEIV FCWK+ AE+L++L E  GCEA LR+ +  K +VTDN 
Sbjct: 151 VDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNG 210

Query: 572 NYIVDLYFKSPIKDARA 622
           NYIVD++ +  + D  A
Sbjct: 211 NYIVDMHVEEDMGDLGA 227


>sp|Q9V0L6|RPIA_PYRAB Ribose-5-phosphate isomerase A OS=Pyrococcus
           abyssi GN=rpiA PE=3 SV=1
          Length = 229

 Score =  168 bits (425), Expect = 2e-41
 Identities = 85/186 (45%), Positives = 129/186 (69%), Gaps = 2/186 (1%)
 Frame = +2

Query: 44  DELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRTEEQ 223
           +E+K +AA +A+++++  MV+GLGTGST A+ +  +G ++K+G++ DIVGVPTS ++   
Sbjct: 4   EEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIRLLGDMIKKGEVSDIVGVPTSYQSRLL 63

Query: 224 AASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVVVDE 403
           A   GIP++ LD    ID+A+DGADEVDP+LNL+KGRG AL  EK++E+ +  F+V+VDE
Sbjct: 64  AIESGIPVATLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIESRAGMFIVLVDE 123

Query: 404 TKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRM--DGDKPYVTDNSNY 577
            KLVD L   ++ +P+E++   W+   E L     +   EAKLRM  + D P +TDN N+
Sbjct: 124 RKLVDYL-CQKMPVPIEVIPQAWRAIVEEL----SIFNAEAKLRMGVNKDGPVITDNGNF 178

Query: 578 IVDLYF 595
           I+D  F
Sbjct: 179 IIDAKF 184


>sp|A5VI94|RPIA_LACRD Ribose-5-phosphate isomerase A
           OS=Lactobacillus reuteri (strain DSM 20016) GN=rpiA PE=3
           SV=1
          Length = 227

 Score =  166 bits (421), Expect = 7e-41
 Identities = 92/196 (46%), Positives = 130/196 (66%)
 Frame = +2

Query: 35  LTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRT 214
           + Q+ LK     ++V+Y+KSGM++GLGTGST  ++V ++G+ ++EGK+KDI+GV TS RT
Sbjct: 1   MDQNALKEQTGKESVKYIKSGMIVGLGTGSTVKYMVDELGKQVQEGKIKDIIGVTTSNRT 60

Query: 215 EEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVV 394
            +QA  LGI +  +DD   IDL IDGADE+  D   +KG GGALL EK+V  AS K + +
Sbjct: 61  AKQARDLGITIKDIDDVDHIDLTIDGADEISDDFQGIKGGGGALLWEKIVANASNKVMWI 120

Query: 395 VDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGDKPYVTDNSN 574
           VDE+KLV  LG     +PVE++ F  ++  +RL    E  G +   RMDGDK + TD +N
Sbjct: 121 VDESKLVHKLGA--FPLPVEVIPFGSQHVFDRL----EKKGYKPTWRMDGDKKFRTDENN 174

Query: 575 YIVDLYFKSPIKDARA 622
           YI+DL+    I D +A
Sbjct: 175 YIIDLHL-GEIDDPKA 189


>sp|Q6HHU6|RPIA_BACHK Ribose-5-phosphate isomerase A OS=Bacillus
           thuringiensis subsp. konkukian GN=rpiA PE=3 SV=1
          Length = 220

 Score =  166 bits (421), Expect = 7e-41
 Identities = 87/187 (46%), Positives = 125/187 (66%)
 Frame = +2

Query: 47  ELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRTEEQA 226
           +LK +A + A  +VK GM +GLGTGSTA + + K+GQ +KEG    I  VPTSK TE  A
Sbjct: 2   DLKQIAGEYAATFVKDGMKVGLGTGSTAYWTIQKLGQRVKEGL--SIQAVPTSKETEALA 59

Query: 227 ASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVVVDET 406
             L IPL  L+D   +DL IDGADE+D +L L+KG GGALLREK+V ++S + +++VDE+
Sbjct: 60  QQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDES 119

Query: 407 KLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGDKPYVTDNSNYIVD 586
           K+V  LG     +P+EI+ F WK    ++++L    GC+  LR+  ++ ++TDN+N IVD
Sbjct: 120 KVVTRLG--TFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIVD 173

Query: 587 LYFKSPI 607
             F + I
Sbjct: 174 CIFPNHI 180


>sp|Q81PL1|RPIA_BACAN Ribose-5-phosphate isomerase A OS=Bacillus
           anthracis GN=rpiA PE=3 SV=1
          Length = 220

 Score =  166 bits (421), Expect = 7e-41
 Identities = 86/187 (45%), Positives = 125/187 (66%)
 Frame = +2

Query: 47  ELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRTEEQA 226
           +LK +A + A  +VK GM +GLGTGSTA + + K+GQ +KEG    I  VPTSK TE  A
Sbjct: 2   DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGL--SIQAVPTSKETEALA 59

Query: 227 ASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVVVDET 406
             L IPL  L+D   +DL IDGADE+D +L L+KG GGALLREK+V ++S + +++VDE+
Sbjct: 60  QQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIVDES 119

Query: 407 KLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGDKPYVTDNSNYIVD 586
           K+V  LG     +P+EI+ F WK    ++++L    GC+  LR+  ++ ++TDN+N I+D
Sbjct: 120 KVVTRLG--TFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIID 173

Query: 587 LYFKSPI 607
             F + I
Sbjct: 174 CIFPNHI 180


>sp|Q63AF7|RPIA_BACCZ Ribose-5-phosphate isomerase A OS=Bacillus
           cereus (strain ZK / E33L) GN=rpiA PE=3 SV=1
          Length = 220

 Score =  166 bits (420), Expect = 9e-41
 Identities = 85/187 (45%), Positives = 125/187 (66%)
 Frame = +2

Query: 47  ELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRTEEQA 226
           +LK +A + A  +VK GM +GLGTGSTA + + K+GQ +KEG    I  VPTSK TE  A
Sbjct: 2   DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEGL--SIQAVPTSKETEALA 59

Query: 227 ASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVVVDET 406
             L IPL  L+D   +DL IDGADE+D +L L+KG GGALLREK+V ++S + ++++DE+
Sbjct: 60  QQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKELIIIIDES 119

Query: 407 KLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGDKPYVTDNSNYIVD 586
           K+V  LG     +P+EI+ F WK    ++++L    GC+  LR+  ++ ++TDN+N I+D
Sbjct: 120 KVVTRLG--TFPLPIEIIPFAWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIID 173

Query: 587 LYFKSPI 607
             F + I
Sbjct: 174 CIFPNHI 180


>sp|A7NNA4|RPIA_ROSCS Ribose-5-phosphate isomerase A OS=Roseiflexus
           castenholzii (strain DSM 13941 / HLO8) GN=rpiA PE=3 SV=1
          Length = 234

 Score =  164 bits (414), Expect = 4e-40
 Identities = 89/179 (49%), Positives = 124/179 (69%), Gaps = 1/179 (0%)
 Frame = +2

Query: 62  AADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRTEEQAASLGI 241
           AA++A++YV+SGM +GLGTGSTA+F++  +   L +G+L+ +VGVPTS++T   A  LGI
Sbjct: 10  AAERALDYVESGMAIGLGTGSTASFMLRGLAARLADGRLQRVVGVPTSEQTAVLARELGI 69

Query: 242 PLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVVVDETKLVDG 421
           PL+ LD HP +DLA+DGADE+DP L L+KG GGA+LREK+V A++A+FVV+   +K V+ 
Sbjct: 70  PLTTLDRHPSLDLALDGADEIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVER 129

Query: 422 LGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMD-GDKPYVTDNSNYIVDLYF 595
           L G +  +PVE+V F       RL  L    G E  LR D    P+VTD  N I+D +F
Sbjct: 130 L-GERSPLPVEVVTFGMPLCIRRLAAL----GGEPVLRCDHSGAPFVTDEGNLILDCHF 183


>sp|Q5JH26|RPIA_PYRKO Ribose-5-phosphate isomerase A OS=Pyrococcus
           kodakaraensis GN=rpiA PE=3 SV=1
          Length = 229

 Score =  164 bits (414), Expect = 4e-40
 Identities = 86/186 (46%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
 Frame = +2

Query: 44  DELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRTEEQ 223
           +E+K   A +A+++++  MV+GLGTGST A+ +  +G+LL EG+L+D+ GVPTS +    
Sbjct: 4   EEMKKAVAKEALKFIEDEMVVGLGTGSTTAYFINYLGKLLMEGELEDVYGVPTSHQARLL 63

Query: 224 AASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVVVDE 403
           A   GIP+  LD+   ID+A+DGADEVDP +NL+KGRG AL  EK++E  +  F+V+VDE
Sbjct: 64  ALEAGIPVVSLDEVDAIDIAVDGADEVDPHMNLIKGRGAALTMEKIIEYRAGMFIVLVDE 123

Query: 404 TKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRM--DGDKPYVTDNSNY 577
           +KLV+ L G ++ +P+E++   W+  AE L    EV    A+LRM    D P VTDN N+
Sbjct: 124 SKLVEYL-GQKMPVPIEVIPAAWRAIAEEL----EVFNATAELRMAVKKDGPVVTDNGNF 178

Query: 578 IVDLYF 595
           I+D  F
Sbjct: 179 ILDAKF 184


>sp|A7HS32|RPIA_PARL1 Ribose-5-phosphate isomerase A OS=Parvibaculum
           lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
           GN=rpiA PE=3 SV=1
          Length = 231

 Score =  163 bits (413), Expect = 6e-40
 Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 3/192 (1%)
 Frame = +2

Query: 35  LTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRT 214
           +  D+ K  AA +A+E+VK GM LG+GTGSTA   V  +G+ +K G   DIVGVPTS+RT
Sbjct: 1   MNADDQKKAAAVRALEFVKPGMKLGMGTGSTAEHFVRALGEKVKAGL--DIVGVPTSERT 58

Query: 215 EEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVV 394
            + AASLGIPL+ LDD P +D+ +DGADE+D  L L+KG GGALLREK+V  AS + +V+
Sbjct: 59  AKLAASLGIPLTNLDDTPHLDITVDGADELDGKLRLIKGGGGALLREKIVATASDRMIVI 118

Query: 395 VDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGD---KPYVTD 565
            D +KLV  LG     +PVE++ F     A ++  +    GC  K+    D   +P+ TD
Sbjct: 119 ADASKLVKTLG--SFPLPVEVIPFGSAVTARKIAEVASAHGCTGKMSRRADEYGEPFFTD 176

Query: 566 NSNYIVDLYFKS 601
           + N+I D  F S
Sbjct: 177 SENFIYDCAFGS 188


>sp|Q8DZC6|RPIA_STRA5 Ribose-5-phosphate isomerase A
           OS=Streptococcus agalactiae serotype V GN=rpiA PE=3 SV=1
          Length = 223

 Score =  163 bits (412), Expect = 8e-40
 Identities = 95/186 (51%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
 Frame = +2

Query: 44  DELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVPTSKRTEEQ 223
           DELK +A   A +YVK+GM++GLGTGSTA F V +IG+ +KE  L+ +VGV TS RT EQ
Sbjct: 2   DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQ 60

Query: 224 AASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASAKFVVVVDE 403
           A  LGIPL   DD   ID+ +DGADEVDPD N +KG GGALL EK+V   + +++ VVDE
Sbjct: 61  ARGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDE 120

Query: 404 TKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAG-CEAKLRMDGDKPYVTDNSNYI 580
           +KLV+ LG  +L  PVE+V    +Y +ERL  + +  G C +    +GD+ ++TD  NYI
Sbjct: 121 SKLVETLGAFKL--PVEVV----RYGSERLFRVFKSKGYCPSFRETEGDR-FITDMGNYI 173

Query: 581 VDLYFK 598
           +DL  K
Sbjct: 174 IDLDLK 179
tr_hit_id A9TF97
Definition tr|A9TF97|A9TF97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 210
Score (bit) 362.0
E-value 1.0e-98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK959987|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_C21, 5'
         (626 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TF97|A9TF97_PHYPA Predicted protein OS=Physcomitrella paten...   362   1e-98
tr|A9SR64|A9SR64_PHYPA Predicted protein OS=Physcomitrella paten...   358   1e-97
tr|A9NMV1|A9NMV1_PICSI Putative uncharacterized protein OS=Picea...   334   3e-90
tr|A7Q5Y6|A7Q5Y6_VITVI Chromosome chr14 scaffold_54, whole genom...   324   3e-87
tr|Q8RU73|Q8RU73_SPIOL Chloroplast ribose-5-phosphate isomerase ...   319   1e-85
tr|Q6ZEZ2|Q6ZEZ2_ORYSJ Os07g0176900 protein OS=Oryza sativa subs...   315   1e-84
tr|B8B7P6|B8B7P6_ORYSI Putative uncharacterized protein OS=Oryza...   315   1e-84
tr|Q6ZEZ1|Q6ZEZ1_ORYSJ Putative ribose-5-phosphate isomerase OS=...   315   2e-84
tr|B6TI56|B6TI56_MAIZE Ribose-5-phosphate isomerase OS=Zea mays ...   314   3e-84
tr|A8IRQ1|A8IRQ1_CHLRE Ribose-5-phosphate isomerase OS=Chlamydom...   313   5e-84
tr|Q9S726|Q9S726_ARATH Putative ribose 5-phosphate isomerase (Pu...   292   1e-77
tr|Q8L9K5|Q8L9K5_ARATH Putative ribose 5-phosphate isomerase OS=...   292   1e-77
tr|B6SGJ7|B6SGJ7_MAIZE Ribose-5-phosphate isomerase OS=Zea mays ...   286   5e-76
tr|A7P3I3|A7P3I3_VITVI Chromosome chr1 scaffold_5, whole genome ...   274   4e-72
tr|A7NZE2|A7NZE2_VITVI Chromosome chr6 scaffold_3, whole genome ...   271   2e-71
tr|Q1PFB3|Q1PFB3_ARATH Putative uncharacterized protein OS=Arabi...   261   3e-68
tr|A9PI74|A9PI74_POPTR Putative uncharacterized protein OS=Popul...   261   3e-68
tr|Q8LBQ2|Q8LBQ2_ARATH Putative ribose 5-phosphate isomerase OS=...   247   4e-64
tr|Q9C998|Q9C998_ARATH Putative ribose 5-phosphate isomerase; 39...   247   5e-64
tr|Q9C5D1|Q9C5D1_ARATH Putative ribose 5-phosphate isomerase OS=...   247   5e-64
tr|Q5ENN9|Q5ENN9_HETTR Chloroplast ribose-5-phosphate isomerase ...   241   3e-62
tr|B8BUF2|B8BUF2_THAPS Predicted protein OS=Thalassiosira pseudo...   237   4e-61
tr|Q2IA08|Q2IA08_PAVLU Chloroplast ribulose phosphate isomerase ...   237   5e-61
tr|Q018K0|Q018K0_OSTTA Chloroplast ribose-5-phosphate isomerase ...   221   3e-56
tr|A9P9K7|A9P9K7_POPTR Putative uncharacterized protein OS=Popul...   218   2e-55
tr|B5Y3N7|B5Y3N7_PHATR Predicted protein OS=Phaeodactylum tricor...   217   5e-55
tr|B8BUF5|B8BUF5_THAPS Ribose-5-phosphate isomerase OS=Thalassio...   216   1e-54
tr|A5BTA5|A5BTA5_VITVI Putative uncharacterized protein OS=Vitis...   214   4e-54
tr|A4RY01|A4RY01_OSTLU Predicted protein OS=Ostreococcus lucimar...   213   8e-54
tr|B6U823|B6U823_MAIZE Ribose-5-phosphate isomerase OS=Zea mays ...   191   4e-47

>tr|A9TF97|A9TF97_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_221767 PE=4 SV=1
          Length = 320

 Score =  362 bits (929), Expect = 1e-98
 Identities = 184/210 (87%), Positives = 195/210 (92%), Gaps = 2/210 (0%)
 Frame = +2

Query: 2   SMAPRASAQ--KVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGK 175
           + APRA +Q  + LTQDELK +AA+KAVEYVKSGMVLGLGTGSTAAF VAKIG+LLKEGK
Sbjct: 73  TFAPRAQSQATQALTQDELKKIAAEKAVEYVKSGMVLGLGTGSTAAFAVAKIGELLKEGK 132

Query: 176 LKDIVGVPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLRE 355
           L DIVGVPTSKRT EQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLRE
Sbjct: 133 LTDIVGVPTSKRTAEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLRE 192

Query: 356 KMVEAASAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLR 535
           KMVE ASAKFVV+VDETKLV GLGGS LAMPVE+VQFCWKYNAERLKNLPEVAGCE +LR
Sbjct: 193 KMVEKASAKFVVIVDETKLVKGLGGSGLAMPVEVVQFCWKYNAERLKNLPEVAGCEVELR 252

Query: 536 MDGDKPYVTDNSNYIVDLYFKSPIKDARAA 625
           MDGDKPYVTDNSNYI+DLYF+ PIKDA AA
Sbjct: 253 MDGDKPYVTDNSNYIIDLYFQEPIKDANAA 282


>tr|A9SR64|A9SR64_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_133835 PE=4 SV=1
          Length = 253

 Score =  358 bits (919), Expect = 1e-97
 Identities = 181/206 (87%), Positives = 191/206 (92%)
 Frame = +2

Query: 8   APRASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDI 187
           A  + A   LTQDELK +AA+KAVEYVKSGMVLGLGTGSTAAF VAKIG+LLKEGKL DI
Sbjct: 10  ASESDAGTKLTQDELKKIAAEKAVEYVKSGMVLGLGTGSTAAFAVAKIGELLKEGKLTDI 69

Query: 188 VGVPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 367
           VGVPTSKRT EQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVE
Sbjct: 70  VGVPTSKRTAEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 129

Query: 368 AASAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGD 547
           AASAKFVV+VDETKLV GLGGS+LAMPVE+VQFCWKYNAERLKNLPE+AGCE KLRMDGD
Sbjct: 130 AASAKFVVIVDETKLVKGLGGSKLAMPVEVVQFCWKYNAERLKNLPELAGCEVKLRMDGD 189

Query: 548 KPYVTDNSNYIVDLYFKSPIKDARAA 625
           KPYVTDNSNYI+DLYF+ PI DA AA
Sbjct: 190 KPYVTDNSNYIIDLYFEEPIVDANAA 215


>tr|A9NMV1|A9NMV1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 295

 Score =  334 bits (856), Expect = 3e-90
 Identities = 168/210 (80%), Positives = 192/210 (91%), Gaps = 2/210 (0%)
 Frame = +2

Query: 2   SMAPRASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLK 181
           S+   +S+  VLTQD+LK +AA+KAVEYV+SGMVLGLGTGSTAAF VA+IG+L+K G+LK
Sbjct: 50  SVRAMSSSTSVLTQDQLKKLAAEKAVEYVESGMVLGLGTGSTAAFAVARIGELMKAGELK 109

Query: 182 DIVGVPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKM 361
           DIVGVPTSKRT EQA SLGIPLSVLD+HPKIDLAIDGADEVDP+LNLVKGRGGALLREKM
Sbjct: 110 DIVGVPTSKRTAEQAESLGIPLSVLDEHPKIDLAIDGADEVDPELNLVKGRGGALLREKM 169

Query: 362 VEAASAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRM- 538
           VEAASAKFVV+VDE+KLV+GLGGS LAMPVE+V FCWKYNA RL++L +  GCEAKLRM 
Sbjct: 170 VEAASAKFVVIVDESKLVNGLGGSGLAMPVEVVPFCWKYNASRLQSLFQAEGCEAKLRMD 229

Query: 539 -DGDKPYVTDNSNYIVDLYFKSPIKDARAA 625
            DGDKPY+TDN+NYIVDLYFK+PIKD+RAA
Sbjct: 230 GDGDKPYITDNANYIVDLYFKTPIKDSRAA 259


>tr|A7Q5Y6|A7Q5Y6_VITVI Chromosome chr14 scaffold_54, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031147001
           PE=4 SV=1
          Length = 283

 Score =  324 bits (830), Expect = 3e-87
 Identities = 168/205 (81%), Positives = 183/205 (89%), Gaps = 1/205 (0%)
 Frame = +2

Query: 14  RASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVG 193
           RA +   LTQD+LK +AADKAV+YVKSGMVLGLGTGSTAAFVVAK+G LLK G+L DIVG
Sbjct: 43  RAFSAPALTQDDLKKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGHLLKTGQLSDIVG 102

Query: 194 VPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAA 373
           VPTSKRTEEQA SLGIPLSVLD HP IDLAIDGADEVDPDLNLVKGRGGALLREKMVEAA
Sbjct: 103 VPTSKRTEEQALSLGIPLSVLDHHPSIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAA 162

Query: 374 SAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGD-K 550
           S KFVVVVD+TKLV+GLGGS LAMPVE+VQFCWKYN  RL+ L +  GCEAKLR++ D K
Sbjct: 163 SDKFVVVVDDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLNPDGK 222

Query: 551 PYVTDNSNYIVDLYFKSPIKDARAA 625
           PYVTDNSNYIVDLYFK+PIKD+ AA
Sbjct: 223 PYVTDNSNYIVDLYFKTPIKDSIAA 247


>tr|Q8RU73|Q8RU73_SPIOL Chloroplast ribose-5-phosphate isomerase
           OS=Spinacia oleracea PE=2 SV=1
          Length = 289

 Score =  319 bits (817), Expect = 1e-85
 Identities = 162/203 (79%), Positives = 182/203 (89%), Gaps = 1/203 (0%)
 Frame = +2

Query: 20  SAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGVP 199
           S   VLTQD+LK +AA+KAV+ VKSGMVLGLGTGSTAAF V++IG+LL  GKL +IVG+P
Sbjct: 51  SPTPVLTQDDLKKLAAEKAVDSVKSGMVLGLGTGSTAAFAVSRIGELLSAGKLTNIVGIP 110

Query: 200 TSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASA 379
           TSKRT EQAASLGIPLSVLDDHP+IDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS 
Sbjct: 111 TSKRTAEQAASLGIPLSVLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASD 170

Query: 380 KFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGD-KPY 556
           KF+VVVD+TKLVDGLGGS+LAMPVE+VQFCWKYN +RL+ + +  GCEAKLRM+GD  PY
Sbjct: 171 KFIVVVDDTKLVDGLGGSRLAMPVEVVQFCWKYNLKRLQEIFKELGCEAKLRMEGDSSPY 230

Query: 557 VTDNSNYIVDLYFKSPIKDARAA 625
           VTDNSNYIVDLYF + IKDA AA
Sbjct: 231 VTDNSNYIVDLYFPTSIKDAEAA 253


>tr|Q6ZEZ2|Q6ZEZ2_ORYSJ Os07g0176900 protein OS=Oryza sativa subsp.
           japonica GN=P0534H07.29-1 PE=2 SV=1
          Length = 280

 Score =  315 bits (808), Expect = 1e-84
 Identities = 165/207 (79%), Positives = 179/207 (86%), Gaps = 1/207 (0%)
 Frame = +2

Query: 8   APRASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDI 187
           AP ++A   LTQD+LK +AA +AVE V+SGMVLGLGTGSTAAF VA+IG LL  GKL  I
Sbjct: 38  APASAAAAALTQDDLKRLAAVRAVEQVESGMVLGLGTGSTAAFAVAEIGALLASGKLSGI 97

Query: 188 VGVPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 367
           VGVPTSKRT EQA SLGIPLS LDDHP+IDLAIDGADEVDPDLNLVKGRGGALLREKMVE
Sbjct: 98  VGVPTSKRTFEQAQSLGIPLSTLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 157

Query: 368 AASAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMD-G 544
           AAS KF+VVVDETKLV GLGGS LAMPVE+VQFCWKYN  RL++L    GCEAKLR+D G
Sbjct: 158 AASDKFIVVVDETKLVTGLGGSGLAMPVEVVQFCWKYNQVRLQDLFNDEGCEAKLRLDEG 217

Query: 545 DKPYVTDNSNYIVDLYFKSPIKDARAA 625
            KPYVTDNSNYIVDLYFK+PIKDA AA
Sbjct: 218 GKPYVTDNSNYIVDLYFKTPIKDALAA 244


>tr|B8B7P6|B8B7P6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25096 PE=4 SV=1
          Length = 280

 Score =  315 bits (808), Expect = 1e-84
 Identities = 165/207 (79%), Positives = 179/207 (86%), Gaps = 1/207 (0%)
 Frame = +2

Query: 8   APRASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDI 187
           AP ++A   LTQD+LK +AA +AVE V+SGMVLGLGTGSTAAF VA+IG LL  GKL  I
Sbjct: 38  APASAAAAALTQDDLKRLAAVRAVEQVESGMVLGLGTGSTAAFAVAEIGALLASGKLSGI 97

Query: 188 VGVPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 367
           VGVPTSKRT EQA SLGIPLS LDDHP+IDLAIDGADEVDPDLNLVKGRGGALLREKMVE
Sbjct: 98  VGVPTSKRTFEQAQSLGIPLSTLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 157

Query: 368 AASAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMD-G 544
           AAS KF+VVVDETKLV GLGGS LAMPVE+VQFCWKYN  RL++L    GCEAKLR+D G
Sbjct: 158 AASDKFIVVVDETKLVTGLGGSGLAMPVEVVQFCWKYNQVRLQDLFNDEGCEAKLRLDEG 217

Query: 545 DKPYVTDNSNYIVDLYFKSPIKDARAA 625
            KPYVTDNSNYIVDLYFK+PIKDA AA
Sbjct: 218 GKPYVTDNSNYIVDLYFKTPIKDALAA 244


>tr|Q6ZEZ1|Q6ZEZ1_ORYSJ Putative ribose-5-phosphate isomerase
           OS=Oryza sativa subsp. japonica GN=P0534H07.29-2 PE=4
           SV=1
          Length = 258

 Score =  315 bits (806), Expect = 2e-84
 Identities = 165/207 (79%), Positives = 179/207 (86%), Gaps = 1/207 (0%)
 Frame = +2

Query: 8   APRASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDI 187
           A R++A   LTQD+LK +AA +AVE V+SGMVLGLGTGSTAAF VA+IG LL  GKL  I
Sbjct: 16  AARSAAAAALTQDDLKRLAAVRAVEQVESGMVLGLGTGSTAAFAVAEIGALLASGKLSGI 75

Query: 188 VGVPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 367
           VGVPTSKRT EQA SLGIPLS LDDHP+IDLAIDGADEVDPDLNLVKGRGGALLREKMVE
Sbjct: 76  VGVPTSKRTFEQAQSLGIPLSTLDDHPRIDLAIDGADEVDPDLNLVKGRGGALLREKMVE 135

Query: 368 AASAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMD-G 544
           AAS KF+VVVDETKLV GLGGS LAMPVE+VQFCWKYN  RL++L    GCEAKLR+D G
Sbjct: 136 AASDKFIVVVDETKLVTGLGGSGLAMPVEVVQFCWKYNQVRLQDLFNDEGCEAKLRLDEG 195

Query: 545 DKPYVTDNSNYIVDLYFKSPIKDARAA 625
            KPYVTDNSNYIVDLYFK+PIKDA AA
Sbjct: 196 GKPYVTDNSNYIVDLYFKTPIKDALAA 222


>tr|B6TI56|B6TI56_MAIZE Ribose-5-phosphate isomerase OS=Zea mays
           PE=2 SV=1
          Length = 274

 Score =  314 bits (804), Expect = 3e-84
 Identities = 163/203 (80%), Positives = 177/203 (87%)
 Frame = +2

Query: 17  ASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKDIVGV 196
           A+A   LTQD+LK +AA +AVE VKSGMVLGLGTGSTAAF VA+IG LL  GKL+ IVGV
Sbjct: 36  AAAAAALTQDDLKRLAAVRAVEQVKSGMVLGLGTGSTAAFAVAEIGALLAAGKLEKIVGV 95

Query: 197 PTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS 376
           PTSKRT EQA SLGIPLS LDD+P IDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS
Sbjct: 96  PTSKRTFEQAQSLGIPLSTLDDNPLIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS 155

Query: 377 AKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDGDKPY 556
            KF+V+VDETKLVDGLGGS LAMPVE+VQFCWKYN  RL+ L +  G EAKLR +GDKPY
Sbjct: 156 DKFIVIVDETKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGVEAKLRFEGDKPY 215

Query: 557 VTDNSNYIVDLYFKSPIKDARAA 625
           VTDNSNYIVDLYFK+PIKDA AA
Sbjct: 216 VTDNSNYIVDLYFKTPIKDALAA 238


>tr|A8IRQ1|A8IRQ1_CHLRE Ribose-5-phosphate isomerase
           OS=Chlamydomonas reinhardtii GN=RPI1 PE=4 SV=1
          Length = 269

 Score =  313 bits (802), Expect = 5e-84
 Identities = 161/207 (77%), Positives = 184/207 (88%)
 Frame = +2

Query: 5   MAPRASAQKVLTQDELKMMAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGQLLKEGKLKD 184
           MA   S Q  L+QDELK  AA KAVEYVKSGMV+GLGTGSTAAF V +IGQLLKEGKL++
Sbjct: 23  MAAPVSTQ--LSQDELKKQAAWKAVEYVKSGMVVGLGTGSTAAFAVDRIGQLLKEGKLQN 80

Query: 185 IVGVPTSKRTEEQAASLGIPLSVLDDHPKIDLAIDGADEVDPDLNLVKGRGGALLREKMV 364
           IVGVPTS RT EQA SLGIPL+ LD+ PK+D+AIDGADEVDP+L++VKGRGGALLREKMV
Sbjct: 81  IVGVPTSIRTYEQALSLGIPLATLDEQPKLDVAIDGADEVDPNLDVVKGRGGALLREKMV 140

Query: 365 EAASAKFVVVVDETKLVDGLGGSQLAMPVEIVQFCWKYNAERLKNLPEVAGCEAKLRMDG 544
           E ASAKFV +VD++KLV+GLGGS+LAMPVEIVQFC KY  +RL NLPEV GCEAKLRM+G
Sbjct: 141 EMASAKFVCIVDDSKLVEGLGGSKLAMPVEIVQFCHKYTLQRLANLPEVKGCEAKLRMNG 200

Query: 545 DKPYVTDNSNYIVDLYFKSPIKDARAA 625
           DKPYVTDNSNYIVDLYF++PIKD++AA
Sbjct: 201 DKPYVTDNSNYIVDLYFQTPIKDSQAA 227