DK960001 |
Clone id |
TST39A01NGRL0006_D11 |
Library |
TST39 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_D11. 5' end sequence. |
Accession |
DK960001 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig12 |
Sequence |
CTGGGGCATGTACCTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTATGCCGCAAGTGT CATCCATTGTGGCGAATGCCTTCCATCGCTATCATCGTGGATGTTCGCACTTCTGTGTTT GGGACCTTAAAAAACTACCGTGGCTTGACTTTGCTTGTGTGTGTGGACTGTTGAATTGAA AGTGGCTATCAGTTGCCAAGGTTGTGTTGGTGCAGTGAAGAGGGTGCTTGGGAAGATGGA AGGGGTAAATACATATGATATAGACTTGTATGCGCAGAAAGTGACTGTGAAAGGGAACGT CGAGCCAGAGGATGTTCTTTCTACTGTTTCCTGAACTGGGAAAGCTACCTCGTTTTGGCC AAGTGAAGGACGTACAGCATCGTAGTTTTATTTGTGAATTGATTTTTGGCTATTGTGACA CGAGCTATGCTCATGAAGTGACTGATGATTAAAAAAAACTCTTGCATACTATACGACAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6BK66 |
Definition |
sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii |
Align length |
54 |
Score (bit) |
49.7 |
E-value |
9.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5ZF67 |
Definition |
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major |
Align length |
67 |
Score (bit) |
106.0 |
E-value |
9.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960001|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_D11, 5' (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch... 106 9e-22 tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana... 104 3e-21 tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 103 6e-21 tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea... 103 6e-21 tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populu... 103 7e-21 tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Popul... 103 7e-21 tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Popul... 103 7e-21 tr|O82089|O82089_ARATH Copper homeostasis factor (AT3g56240/F18O... 102 1e-20 tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genom... 102 1e-20 tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum ... 102 1e-20 tr|B2CM19|B2CM19_SOLCH Copper chaperone OS=Solanum chacoense PE=... 102 1e-20 tr|A9P875|A9P875_POPTR Putative uncharacterized protein OS=Popul... 101 2e-20 tr|B6T1K0|B6T1K0_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 101 3e-20 tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea m... 100 5e-20 tr|B6SQL3|B6SQL3_MAIZE Putative uncharacterized protein OS=Zea m... 100 5e-20 tr|B6SHX8|B6SHX8_MAIZE Putative uncharacterized protein OS=Zea m... 100 5e-20 tr|A1ECK4|A1ECK4_9ROSI Putative copper chaperone OS=Citrus hybri... 100 6e-20 tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sat... 99 1e-19 tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subs... 99 1e-19 tr|Q5QL92|Q5QL92_ORYSJ cDNA clone:001-016-H06, full insert seque... 99 1e-19 tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|Q70DK1|Q70DK1_HORVD Chopper chaperone OS=Hordeum vulgare var.... 99 2e-19 tr|Q6ZCF3|Q6ZCF3_ORYSJ Os08g0205400 protein OS=Oryza sativa subs... 98 2e-19 tr|A2YSB2|A2YSB2_ORYSI Putative uncharacterized protein OS=Oryza... 98 2e-19 tr|Q9SE03|Q9SE03_SOYBN Copper chaperone homolog CCH OS=Glycine m... 97 7e-19 tr|Q9C7U6|Q9C7U6_ARATH Copper homeostasis factor, putative; 2714... 96 9e-19 tr|A9SR07|A9SR07_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|B2MUN5|B2MUN5_9CARY Copper chaperone protein OS=Knorringia si... 93 1e-17 tr|B5M1W7|B5M1W7_RHEAU Copper homeostasis factor OS=Rheum austra... 92 2e-17 tr|B7FJ81|B7FJ81_MEDTR Putative uncharacterized protein OS=Medic... 91 3e-17
>tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch1 PE=4 SV=1 Length = 109
Score = 106 bits (264), Expect = 9e-22 Identities = 52/67 (77%), Positives = 56/67 (83%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TVELKV +SCQGCVGAVKRVLGKMEGV ++DID+ QKVTVKGNVE E VL TVS TGK Sbjct: 4 TVELKVGMSCQGCVGAVKRVLGKMEGVESFDIDIEKQKVTVKGNVEKEAVLQTVSKTGKK 63
Query: 407 TSFWPSE 427 T FWP E Sbjct: 64 TEFWPEE 70
>tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana GN=At1g66240 PE=4 SV=1 Length = 106
Score = 104 bits (259), Expect = 3e-21 Identities = 48/71 (67%), Positives = 61/71 (85%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV L+VA++C+GCVGAVKRVLGKMEGV ++D+D+ QKVTVKGNV+P+ VL TV+ TGK Sbjct: 34 TVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKK 93
Query: 407 TSFWPSEGRTA 439 T+FW +EG TA Sbjct: 94 TAFWEAEGETA 104
>tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 Length = 84
Score = 103 bits (257), Expect = 6e-21 Identities = 50/71 (70%), Positives = 58/71 (81%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SC+GCVGAVKRVLGKMEGV +YD+D+ QKVTVKGNV P+ VL TVS TGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDVDIMEQKVTVKGNVTPDAVLQTVSKTGKK 63
Query: 407 TSFWPSEGRTA 439 TSFW +E T+ Sbjct: 64 TSFWEAEAVTS 74
>tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 75
Score = 103 bits (257), Expect = 6e-21 Identities = 50/67 (74%), Positives = 56/67 (83%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SC+GCVGAVKRVL KMEGV TYD++L QKVTVKGNV+P+ VL TVS TGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLNKMEGVETYDVNLKEQKVTVKGNVKPDAVLQTVSKTGKE 63
Query: 407 TSFWPSE 427 TSFWP E Sbjct: 64 TSFWPEE 70
>tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populus tremula var. glandulosa GN=CCH PE=4 SV=1 Length = 85
Score = 103 bits (256), Expect = 7e-21 Identities = 50/67 (74%), Positives = 57/67 (85%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVS TGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKK 63
Query: 407 TSFWPSE 427 T+FW +E Sbjct: 64 TAFWEAE 70
>tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 85
Score = 103 bits (256), Expect = 7e-21 Identities = 50/67 (74%), Positives = 57/67 (85%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVS TGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKK 63
Query: 407 TSFWPSE 427 T+FW +E Sbjct: 64 TAFWEAE 70
>tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 85
Score = 103 bits (256), Expect = 7e-21 Identities = 50/67 (74%), Positives = 57/67 (85%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVS TGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKK 63
Query: 407 TSFWPSE 427 T+FW +E Sbjct: 64 TAFWEAE 70
>tr|O82089|O82089_ARATH Copper homeostasis factor (AT3g56240/F18O21_200) OS=Arabidopsis thaliana GN=CCH PE=2 SV=1 Length = 121
Score = 102 bits (255), Expect = 1e-20 Identities = 50/67 (74%), Positives = 55/67 (82%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SCQGCVGAV RVLGKMEGV ++DID+ QKVTVKGNVEPE V TVS TGK Sbjct: 4 TVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGKK 63
Query: 407 TSFWPSE 427 TS+WP E Sbjct: 64 TSYWPVE 70
>tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034927001 PE=4 SV=1 Length = 134
Score = 102 bits (255), Expect = 1e-20 Identities = 50/67 (74%), Positives = 57/67 (85%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SC+GCVGAVKRVLGKMEGV ++DIDL QKVTVKGNV+P+ VL TVS TGK Sbjct: 52 TVVLKVGMSCEGCVGAVKRVLGKMEGVESFDIDLKEQKVTVKGNVQPDAVLKTVSKTGKK 111
Query: 407 TSFWPSE 427 TSFW +E Sbjct: 112 TSFWEAE 118
>tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum GN=LeCCH PE=4 SV=1 Length = 81
Score = 102 bits (254), Expect = 1e-20 Identities = 50/64 (78%), Positives = 55/64 (85%) Frame = +2
Query: 227 TVELKVAISCQGCVGAVKRVLGKMEGVNTYDIDLYAQKVTVKGNVEPEDVLSTVS*TGKA 406 TV LKV +SC+GCVGAVKRVLGKMEGV T+DIDL QKVTVKGNV+P+ VL TVS TGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVETFDIDLKEQKVTVKGNVQPDAVLKTVSKTGKP 63
Query: 407 TSFW 418 TSFW Sbjct: 64 TSFW 67
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