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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960005
Clone id TST39A01NGRL0006_D15
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_D15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGCAGCAGCGACTCCGTAAGTGCAGCAGGATGCTGAGAGACAACGTTGAAAGCGTTTAC
TACCTCATTCCTCCTCCTCCTTCGTCTACCGACAGGAAGCACGTGTATCCAAAATCTAAG
TATAACAAAGAATCGGACACGTTTATGACCTGTGCTAAATCTAGAACATCGAGAGCAACT
TTTGGCCACCCAAATGGATCACTCAATCCCCGGACAAATGAGTATTTAAGAAAATATTCA
TGGCGCAATCTTAGTCCCTTTGTGATACGTACCCCAAAAGTACATATCAAGCCACCCATT
CCCCTTGAAAGAGCGCGTTTGAGACATCGGAGAGTGGATTTCATAAACAACAATGGCTAT
GACATGGTATATTCTTGTTGGAGGAATGGGAGAAGAAGGAGCTTATTGAAGGGCTCAAGA
AGAAGTGGCAGCAAGTAAACACGACATATCAGAAAACTACAGTCACTCTTGATACATGGG
CAAAGAAAGCCCGCAAAGAGAGATTTGAAGACCAGCTGATGGAAATTGAGAGAGACATCC
AAACTTTGTCAAGGCGTGTGGTCCTTGTCGTAGATAATGGCAAGTCACAGTCATCTAGCA
GCT
■■Homology search results ■■ -
sp_hit_id Q8TC29
Definition sp|Q8TC29|ENKUR_HUMAN Enkurin OS=Homo sapiens
Align length 51
Score (bit) 42.4
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960005|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_D15, 5'
         (590 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TC29|ENKUR_HUMAN Enkurin OS=Homo sapiens GN=C10orf63 PE=2 SV=1    42   0.002
sp|Q6SP97|ENKUR_MOUSE Enkurin OS=Mus musculus PE=1 SV=1                41   0.004
sp|Q97N28|Y010_CLOAB UPF0182 protein CA_C0010 OS=Clostridium ace...    32   1.8  
sp|Q13U46|MTGA_BURXL Monofunctional biosynthetic peptidoglycan t...    32   1.8  
sp|Q5LTY7|THYX_SILPO Thymidylate synthase thyX OS=Silicibacter p...    31   4.0  
sp|P42403|BGL2_BACSU Probable beta-glucosidase OS=Bacillus subti...    31   4.0  
sp|Q73FX5|THYX_WOLPM Thymidylate synthase thyX OS=Wolbachia pipi...    31   5.3  
sp|Q1LSR7|SSRP_BAUCH SsrA-binding protein OS=Baumannia cicadelli...    31   5.3  
sp|P79944|EOMES_XENLA Eomesodermin OS=Xenopus laevis GN=eomes PE...    31   5.3  
sp|B2RY04|DOCK5_MOUSE Dedicator of cytokinesis protein 5 OS=Mus ...    30   6.9  
sp|Q66H04|FBX43_RAT F-box only protein 43 OS=Rattus norvegicus G...    30   9.0  

>sp|Q8TC29|ENKUR_HUMAN Enkurin OS=Homo sapiens GN=C10orf63 PE=2 SV=1
          Length = 256

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 15/51 (29%), Positives = 33/51 (64%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W++V+  +Q  +V +D+  KK RK+R E+++ ++E DI  + +  ++ + N
Sbjct: 204 WEEVHKEFQSLSVFIDSIPKKIRKQRLEEEMKQLEHDIGIIEKHKIIYIAN 254


>sp|Q6SP97|ENKUR_MOUSE Enkurin OS=Mus musculus PE=1 SV=1
          Length = 255

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 14/51 (27%), Positives = 32/51 (62%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W++V+  +Q  +V +D+  KK RK++ E ++ ++E DI  + +  ++ + N
Sbjct: 204 WEEVHKEFQSLSVFIDSVPKKIRKQKLEKEMKQLEHDISVIEKHKIIYIAN 254


>sp|Q97N28|Y010_CLOAB UPF0182 protein CA_C0010 OS=Clostridium
           acetobutylicum GN=CA_C0010 PE=3 SV=1
          Length = 906

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +3

Query: 60  PPPSSTDRKHVYPKSKYNKESDTFMTCAKSRTSRATFGHPNGSLNPRTNEY 212
           PP +ST+ K   P+  Y +E+D +   A +  +   F +P+GS N +TN Y
Sbjct: 454 PPQNSTNLKITNPRIYYGEETDDY---AIANNTLGEFDYPDGSKN-KTNNY 500


>sp|Q13U46|MTGA_BURXL Monofunctional biosynthetic peptidoglycan
           transglycosylase OS=Burkholderia xenovorans (strain
           LB400) GN=mtgA PE=3 SV=1
          Length = 240

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
 Frame = +3

Query: 189 LNPRTNEYLRKYSWRNLSPFVIRTPKVHIKPPIP-----LERARLRHRRVDFINNNGY-- 347
           +NPRT  ++R  +WR LS         H   P       L+RA +     +F+NNNGY  
Sbjct: 44  VNPRTTSFMRSDAWR-LSQDRPDLSVQHTWVPYDQISRNLKRAIIASEDANFVNNNGYET 102

Query: 348 DMVYSCW 368
           D +   W
Sbjct: 103 DAILQAW 109


>sp|Q5LTY7|THYX_SILPO Thymidylate synthase thyX OS=Silicibacter
           pomeroyi GN=thyX PE=3 SV=2
          Length = 302

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +3

Query: 123 DTFMTCAKSRTSRATFGHPNGSLNPRTNEYLRKYSWRNL--SPFVIRTPKVHIKPPIPLE 296
           D    C  +R S  T     G+ + + +E L +Y  R+   +PF +   K+H+K P+ + 
Sbjct: 53  DDAAICQAARVSYGT-----GTKSVQNDEGLIRYLMRHWHSTPFEMCELKLHVKLPVFVA 107

Query: 297 RARLRHRRVDFINNNGYDMVYS 362
           R  +RHR     N N Y   YS
Sbjct: 108 RQWIRHRTA---NVNEYSARYS 126


>sp|P42403|BGL2_BACSU Probable beta-glucosidase OS=Bacillus subtilis
           GN=yckE PE=3 SV=1
          Length = 477

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -1

Query: 296 FKGNGWLDMYFWGTY 252
           F  N WLDMY WGTY
Sbjct: 249 FTNNWWLDMYCWGTY 263


>sp|Q73FX5|THYX_WOLPM Thymidylate synthase thyX OS=Wolbachia
           pipientis wMel GN=thyX PE=3 SV=1
          Length = 284

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +3

Query: 150 RTSRATFGHPNGSLNPRTNEYLRKYSWRN--LSPFVIRTPKVHIKPPIPLERARLRHRRV 323
           + +R ++G   G+     +E L KY  R+   +PF +   K H+K PI + R  +RHR  
Sbjct: 43  QAARVSYG--KGTKQISQDEALIKYLMRHHHTTPFEMCEIKFHVKLPIFVARQWIRHRTA 100

Query: 324 DFINNNGYDMVYSCWRN 374
              N N Y   YS   N
Sbjct: 101 ---NVNEYSARYSILDN 114


>sp|Q1LSR7|SSRP_BAUCH SsrA-binding protein OS=Baumannia
           cicadellinicola subsp. Homalodisca coagulata GN=smpB
           PE=3 SV=1
          Length = 161

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 17/50 (34%), Positives = 30/50 (60%)
 Frame = -2

Query: 253 ITKGLRLRHEYFLKYSFVRGLSDPFGWPKVALDVLDLAQVINVSDSLLYL 104
           IT+  R+R+EYF++  F  G+S   GW   +L     A +++++DS + L
Sbjct: 15  ITQNKRVRYEYFIEQEFEAGIS-LLGWEVKSL----RAGIVHINDSYILL 59


>sp|P79944|EOMES_XENLA Eomesodermin OS=Xenopus laevis GN=eomes PE=2
           SV=1
          Length = 692

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
 Frame = +3

Query: 24  RDNVESVYYL-----IPPPPSSTDRKH-VYPKSKYNKE---SDTFMTC---AKSRTSRAT 167
           RDN +S+Y       + P P+ + R H + P ++Y+ +    D F+     A+  +   T
Sbjct: 442 RDNYDSMYTASESDRLTPSPADSPRSHQIVPGTRYSVQPFFQDQFVNNLPPARYYSGERT 501

Query: 168 FGHPNGSLNPRTNE 209
               NG L+P+TNE
Sbjct: 502 VPQANGLLSPQTNE 515


>sp|B2RY04|DOCK5_MOUSE Dedicator of cytokinesis protein 5 OS=Mus
            musculus GN=Dock5 PE=1 SV=1
          Length = 1868

 Score = 30.4 bits (67), Expect = 6.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 9    CSRMLRDNVESVYYLIPPPPSSTDRK 86
            C R L++ VE +Y +I  PPS T+RK
Sbjct: 1625 CFRELKEKVEKLYGVITLPPSMTERK 1650
tr_hit_id A9SPZ3
Definition tr|A9SPZ3|A9SPZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 59
Score (bit) 58.9
E-value 2.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960005|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_D15, 5'
         (590 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SPZ3|A9SPZ3_PHYPA Predicted protein OS=Physcomitrella paten...    59   2e-07
tr|A9RGC0|A9RGC0_PHYPA Predicted protein OS=Physcomitrella paten...    56   2e-06
tr|A8J098|A8J098_CHLRE Flagellar associated protein OS=Chlamydom...    55   2e-06
tr|B5THN4|B5THN4_SACKO Enkurin-like protein OS=Saccoglossus kowa...    49   3e-04
tr|Q7ZWE8|Q7ZWE8_DANRE C10orf63 protein (Fragment) OS=Danio reri...    46   0.002
tr|Q5PQ29|Q5PQ29_XENLA LOC496000 protein OS=Xenopus laevis GN=LO...    46   0.002
tr|A7S040|A7S040_NEMVE Predicted protein OS=Nematostella vectens...    46   0.002
tr|A9UMJ3|A9UMJ3_XENTR LOC100135370 protein OS=Xenopus tropicali...    45   0.002
tr|B6NRC2|B6NRC2_BRAFL Putative uncharacterized protein OS=Branc...    45   0.002
tr|B6N0L4|B6N0L4_BRAFL Putative uncharacterized protein OS=Branc...    45   0.002
tr|Q1JSW2|Q1JSW2_TOXGO Putative uncharacterized protein OS=Toxop...    44   0.009
tr|B6KP10|B6KP10_TOXGO Putative uncharacterized protein OS=Toxop...    44   0.009
tr|Q4R9A6|Q4R9A6_MACFA Testis cDNA clone: QtsA-10395, similar to...    43   0.015
tr|Q5VV23|Q5VV23_HUMAN Chromosome 10 open reading frame 63 OS=Ho...    42   0.020
tr|A8K8Y0|A8K8Y0_HUMAN Chromosome 10 open reading frame 63, isof...    42   0.020
tr|B5XFQ9|B5XFQ9_SALSA Enkurin OS=Salmo salar GN=ENKUR PE=2 SV=1       42   0.026
tr|Q4KL11|Q4KL11_MOUSE Novel protein (4933434I06Rik) OS=Mus musc...    41   0.044
tr|Q018B5|Q018B5_OSTTA Nuclear pore complex protein-related (ISS...    41   0.044
tr|A0CYG1|A0CYG1_PARTE Chromosome undetermined scaffold_31, whol...    39   0.29 
tr|A0CXT4|A0CXT4_PARTE Chromosome undetermined scaffold_30, whol...    39   0.29 
tr|A0BCK6|A0BCK6_PARTE Chromosome undetermined scaffold_10, whol...    39   0.29 
tr|A0DPA8|A0DPA8_PARTE Chromosome undetermined scaffold_59, whol...    38   0.37 
tr|A0D1J6|A0D1J6_PARTE Chromosome undetermined scaffold_34, whol...    38   0.37 
tr|A4RY73|A4RY73_OSTLU Predicted protein OS=Ostreococcus lucimar...    37   0.64 
tr|B0X8F0|B0X8F0_CULQU Putative uncharacterized protein OS=Culex...    37   0.83 
tr|B8C030|B8C030_THAPS Predicted protein OS=Thalassiosira pseudo...    37   1.1  
tr|A9V3A8|A9V3A8_MONBE Predicted protein OS=Monosiga brevicollis...    37   1.1  
tr|A0DEP0|A0DEP0_PARTE Chromosome undetermined scaffold_48, whol...    37   1.1  
tr|A2E7V9|A2E7V9_TRIVA LOC402794 protein, putative OS=Trichomona...    36   1.4  
tr|A0CRP3|A0CRP3_PARTE Chromosome undetermined scaffold_25, whol...    36   1.4  

>tr|A9SPZ3|A9SPZ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_82357 PE=4 SV=1
          Length = 283

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 40/59 (67%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDNGKSQSSSS 589
           W  +N  YQ+ +V LD  +KK RKER+E+ L ++ERDI  LSR V+LV D+  ++  SS
Sbjct: 185 WADMNARYQRMSVVLDIESKKRRKERYEENLSQLERDIALLSRSVILVSDSVPAKVKSS 243


>tr|A9RGC0|A9RGC0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65754 PE=4 SV=1
          Length = 383

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDNGKSQSSSS 589
           W  VN  Y K     DT A+K RK R+E +L  ++RDI  LSR+ VLV D+G SQ + S
Sbjct: 323 WAVVNAEYLKLPFIADTDAQKIRKNRYEQELENLQRDISLLSRKTVLVADSGPSQINPS 381


>tr|A8J098|A8J098_CHLRE Flagellar associated protein
           OS=Chlamydomonas reinhardtii GN=FAP106 PE=4 SV=1
          Length = 240

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSR-RVVLVVDN 565
           W  VNT YQ  ++++D+  KK RKE  E +L EIERDI+TL R  VVLVVD+
Sbjct: 189 WGSVNTAYQGLSLSVDSAVKKGRKEAMERELAEIERDIRTLERGEVVLVVDD 240


>tr|B5THN4|B5THN4_SACKO Enkurin-like protein OS=Saccoglossus
           kowalevskii PE=2 SV=1
          Length = 253

 Score = 48.5 bits (114), Expect = 3e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W+ ++  YQ  +V  DT  KKARKER E ++ ++ERDI+ L + + + + N
Sbjct: 203 WEAIHHQYQGLSVVTDTAPKKARKERMEAEMKQLERDIELLEKHMTIYIGN 253


>tr|Q7ZWE8|Q7ZWE8_DANRE C10orf63 protein (Fragment) OS=Danio rerio
           GN=c10orf63 PE=2 SV=1
          Length = 299

 Score = 45.8 bits (107), Expect = 0.002
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W  ++  YQ  +V +DT  KK RKER E ++ ++ERDI  + R   + + N
Sbjct: 248 WDDLHYQYQGLSVVIDTAPKKYRKERLEQEMKQLERDIDMIERHKTIYISN 298


>tr|Q5PQ29|Q5PQ29_XENLA LOC496000 protein OS=Xenopus laevis
           GN=LOC496000 PE=2 SV=1
          Length = 265

 Score = 45.8 bits (107), Expect = 0.002
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W +++  YQ  +V +DT  KKA KER E ++ ++E+DI  L R  ++ + N
Sbjct: 214 WDKLHHDYQALSVVIDTPPKKAHKERLEAEMKQLEKDIDRLERHKIIYIAN 264


>tr|A7S040|A7S040_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g164783 PE=4 SV=1
          Length = 263

 Score = 45.8 bits (107), Expect = 0.002
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W+ ++  YQ  +V  DT  KKARKER E ++ ++ERDI  + +  V+ + N
Sbjct: 213 WEDLHHQYQGLSVVTDTAPKKARKERMEAEMKQLERDIDMIEKHQVIYLAN 263


>tr|A9UMJ3|A9UMJ3_XENTR LOC100135370 protein OS=Xenopus tropicalis
           GN=LOC100135370 PE=2 SV=1
          Length = 265

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W +++  YQ  +V +DT  KKA KER E ++ ++E+DI  L R  ++ + N
Sbjct: 214 WDKLHHDYQGLSVVIDTPPKKAHKERLEAEMKQLEKDIDRLERHKIIYIAN 264


>tr|B6NRC2|B6NRC2_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_234721 PE=4 SV=1
          Length = 261

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W+ ++  YQ  +V  DT  KKARKER E ++ ++ERDI+ + +   + + N
Sbjct: 210 WELLHHQYQGLSVVTDTAPKKARKERMEAEMKQLERDIEAIEKHKTIYIAN 260


>tr|B6N0L4|B6N0L4_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_125432 PE=4 SV=1
          Length = 276

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 19/51 (37%), Positives = 32/51 (62%)
 Frame = +2

Query: 413 WQQVNTTYQKTTVTLDTWAKKARKERFEDQLMEIERDIQTLSRRVVLVVDN 565
           W+ ++  YQ  +V  DT  KKARKER E ++ ++ERDI+ + +   + + N
Sbjct: 225 WELLHHQYQGLSVVTDTAPKKARKERMEAEMKQLERDIEAIEKHKTIYIAN 275