DK960014 |
Clone id |
TST39A01NGRL0006_D24 |
Library |
TST39 |
Length |
541 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_D24. 5' end sequence. |
Accession |
DK960014 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CCTCAAGCTGGGGAATGGTGGGGGCAAGTGCGCTGGTGGCCTTTCAAGCACACAATGGCA CTAACGTGCTGCCTTTCAAGCTGTCACCGGCGGCGCAAGGGGGGCAGCGGCTGGTGAGCG GCGCGGTGGACATGGCCATAATCAGCAGGCAGGCGGTTATCAGAGGGGCGTCGTTCACCA TTTTCGCGACACTGCAGCTGCGCCCATCGCAGTCCACTTACCTGAACATGATTTGGAATC GCGGTTCCGCTGTGGCGGGCTTTTCTCCTCTTCCCCATAGTCTGCTGCCCCAGGACCTGC GCGGCTTCATGTCCATCAATGTGGCTGCTTGAAAAAGCGCCCCCCTCTTTCGCTCTCTCC GGTCGCACGTCTTGAGTTCGAAACTCGTCGGATTGATGTTTGGGGTCTGTTCCCACGACG TTAAAACTTATCCTTCTTCTATTGCCATTTGTGAATACTTTTGCAAGTTACATCAAGAGG CATACATGGCCTACATATCAAGGAAGAAGGGCAATTTCTAGAGTGTGAAACAAAAAAAAA A |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1J5X4 |
Definition |
sp|Q1J5X4|KUP_STRPF Probable potassium transport system protein kup OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) |
Align length |
58 |
Score (bit) |
34.3 |
E-value |
0.38 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TSY0 |
Definition |
tr|A9TSY0|A9TSY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
81 |
Score (bit) |
65.5 |
E-value |
2.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960014|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_D24, 5' (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TSY0|A9TSY0_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|A9TQG0|A9TQG0_PHYPA Predicted protein OS=Physcomitrella paten... 64 5e-09 tr|A9S916|A9S916_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06 tr|A7NX01|A7NX01_VITVI Chromosome chr5 scaffold_2, whole genome ... 54 4e-06 tr|A5AZK7|A5AZK7_VITVI Putative uncharacterized protein OS=Vitis... 54 4e-06 tr|Q8H7W3|Q8H7W3_ORYSJ cDNA, clone: J075156H17, full insert sequ... 53 8e-06 tr|Q0DUC4|Q0DUC4_ORYSJ Os03g0194300 protein OS=Oryza sativa subs... 53 8e-06 tr|A2XDH6|A2XDH6_ORYSI Putative uncharacterized protein OS=Oryza... 53 8e-06 tr|A6XN02|A6XN02_PRUPE Expressed protein (Fragment) OS=Prunus pe... 51 4e-05 tr|B6UBB1|B6UBB1_MAIZE Dopamine beta-monooxygenase OS=Zea mays P... 50 5e-05 tr|B4FL32|B4FL32_MAIZE Putative uncharacterized protein OS=Zea m... 50 5e-05 tr|Q2A9P4|Q2A9P4_BRAOL Putative uncharacterized protein OS=Brass... 50 7e-05 tr|Q9FGK4|Q9FGK4_ARATH Genomic DNA, chromosome 5, P1 clone:MNJ7 ... 48 3e-04 tr|Q9SJ74|Q9SJ74_ARATH Expressed protein (At2g04850) OS=Arabidop... 47 5e-04 tr|Q8LFW0|Q8LFW0_ARATH Putative uncharacterized protein OS=Arabi... 47 5e-04 tr|Q4PL86|Q4PL86_ARATH Putative uncharacterized protein OS=Arabi... 47 5e-04 tr|Q2A9Y4|Q2A9Y4_BRAOL Putative uncharacterized protein OS=Brass... 47 8e-04 tr|Q2A9E4|Q2A9E4_BRAOL Putative uncharacterized protein OS=Brass... 46 0.001 tr|B6SK92|B6SK92_MAIZE Dopamine beta-monooxygenase OS=Zea mays P... 46 0.001 tr|A9TZ47|A9TZ47_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|A9TA20|A9TA20_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|Q9FKH6|Q9FKH6_ARATH Arabidopsis thaliana genomic DNA, chromos... 46 0.001 tr|Q8LBJ4|Q8LBJ4_ARATH Putative membrane protein OS=Arabidopsis ... 46 0.001 tr|A9NV90|A9NV90_PICSI Putative uncharacterized protein OS=Picea... 45 0.002 tr|Q6YUI4|Q6YUI4_ORYSJ Os08g0335600 protein OS=Oryza sativa subs... 45 0.002 tr|A2YU31|A2YU31_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A9PFK8|A9PFK8_POPTR Putative uncharacterized protein OS=Popul... 45 0.003 tr|A7R534|A7R534_VITVI Chromosome undetermined scaffold_845, who... 44 0.005 tr|A7QZU0|A7QZU0_VITVI Chromosome undetermined scaffold_287, who... 44 0.005 tr|A7QZU2|A7QZU2_VITVI Chromosome undetermined scaffold_287, who... 43 0.009
>tr|A9TSY0|A9TSY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_150088 PE=4 SV=1 Length = 388
Score = 65.5 bits (158), Expect = 2e-09 Identities = 31/81 (38%), Positives = 46/81 (56%) Frame = +3
Query: 12 GMVGASALVAFQAHNGTNVLPFKLSPAAQGGQRLVSGAVDMAIISRQAVIRGASFTIFAT 191 GMVG AL+AFQ+ G V + ++ A +GGQ L+ G + + AV+ GA TIF+T Sbjct: 74 GMVGTQALIAFQSTTGAVVYQYPVTGAVKGGQSLIPGDLTLNFTDTSAVVSGAEMTIFST 133
Query: 192 LQLRPSQSTYLNMIWNRGSAV 254 L L+ S + +W +G V Sbjct: 134 LNLKAGDSMSMQYVWGQGRTV 154
>tr|A9TQG0|A9TQG0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197255 PE=4 SV=1 Length = 387
Score = 63.9 bits (154), Expect = 5e-09 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 3/106 (2%) Frame = +3
Query: 15 MVGASALVAFQAHNGTNVLPFKLSPAAQGGQRLVSGAVDMAIISRQAVIRGASFTIFATL 194 MVG AL AF + G ++ + ++ A +GG LV G V +A + AV+ G + TI T+ Sbjct: 85 MVGTQALAAFSNNTGVSIRTYNVNGAVKGGVPLVPGTVSVAYSNYSAVVVGTTATITGTV 144
Query: 195 QLRPSQSTYLNMIWNRGSA--VAGFSPLPHSLLPQD-LRGFMSINV 323 L+ Q T N++WNRGS VA + HSL D LR + I++ Sbjct: 145 LLKSGQLTSFNVVWNRGSEVDVATAALRSHSLTNADNLRSTLVIDM 190
>tr|A9S916|A9S916_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126011 PE=4 SV=1 Length = 393
Score = 55.1 bits (131), Expect = 2e-06 Identities = 29/80 (36%), Positives = 41/80 (51%) Frame = +3
Query: 15 MVGASALVAFQAHNGTNVLPFKLSPAAQGGQRLVSGAVDMAIISRQAVIRGASFTIFATL 194 MVG AL+AFQ+ G V + ++ +GG V G + + I G TIFATL Sbjct: 74 MVGTQALIAFQSGQGAIVHSYAITGPIKGGAPCVPGNLSLDFTGTSVEISGTEITIFATL 133
Query: 195 QLRPSQSTYLNMIWNRGSAV 254 + + S +N +WN GS V Sbjct: 134 TKKSNGSWTMNHVWNEGSTV 153
>tr|A7NX01|A7NX01_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020124001 PE=4 SV=1 Length = 386
Score = 54.3 bits (129), Expect = 4e-06 Identities = 37/110 (33%), Positives = 57/110 (51%) Frame = +3
Query: 12 GMVGASALVAFQAHNGTNVLPFKLSPAAQGGQRLVSGAVDMAIISRQAVIRGASFTIFAT 191 GMVG+ ALVAFQ +G+ + SP +L G++ + A+ IFAT Sbjct: 87 GMVGSQALVAFQGTDGS--MTVYTSPITSYQTQLQQGSLSFPVFDLSAMQENCDMIIFAT 144
Query: 192 LQLRPSQSTYLNMIWNRGSAVAGFSPLPHSLLPQDLRGFMSINVAA*KSA 341 +QL P +T +N +W G V G P H+L +++ F SI+ + K+A Sbjct: 145 IQL-PGNTTMVNHVWQEG-PVYGNVPGIHALSGANMQSFGSIDFLSKKTA 192
>tr|A5AZK7|A5AZK7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024486 PE=4 SV=1 Length = 386
Score = 54.3 bits (129), Expect = 4e-06 Identities = 37/110 (33%), Positives = 57/110 (51%) Frame = +3
Query: 12 GMVGASALVAFQAHNGTNVLPFKLSPAAQGGQRLVSGAVDMAIISRQAVIRGASFTIFAT 191 GMVG+ ALVAFQ +G+ + SP +L G++ + A+ IFAT Sbjct: 87 GMVGSQALVAFQGTDGS--MTVYTSPITSYQTQLQQGSLSFPVFDLSAMQENCDMIIFAT 144
Query: 192 LQLRPSQSTYLNMIWNRGSAVAGFSPLPHSLLPQDLRGFMSINVAA*KSA 341 +QL P +T +N +W G V G P H+L +++ F SI+ + K+A Sbjct: 145 IQL-PGNTTMVNHVWQEG-PVYGNVPGIHALSGANMQSFGSIDFLSRKTA 192
>tr|Q8H7W3|Q8H7W3_ORYSJ cDNA, clone: J075156H17, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0064E16.14 PE=2 SV=1 Length = 417
Score = 53.1 bits (126), Expect = 8e-06 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 11/114 (9%) Frame = +3
Query: 15 MVGASALVAFQ--AHNGTNVLPFKLSPAAQ-GGQRLVSGAVDMAIISRQA--------VI 161 M GA L AF + LPF LSP + LVS +D+ +++ A V Sbjct: 100 MTGARVLAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVR 159
Query: 162 RGASFTIFATLQLRPSQSTYLNMIWNRGSAVAGFSPLPHSLLPQDLRGFMSINV 323 GA+ TI AT++L P++ T L+ +WNRG V G+SP H DL ++++ Sbjct: 160 DGATVTIAATIRLSPNR-TKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI 212
>tr|Q0DUC4|Q0DUC4_ORYSJ Os03g0194300 protein OS=Oryza sativa subsp. japonica GN=Os03g0194300 PE=4 SV=1 Length = 439
Score = 53.1 bits (126), Expect = 8e-06 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 11/114 (9%) Frame = +3
Query: 15 MVGASALVAFQ--AHNGTNVLPFKLSPAAQ-GGQRLVSGAVDMAIISRQA--------VI 161 M GA L AF + LPF LSP + LVS +D+ +++ A V Sbjct: 122 MTGARVLAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVR 181
Query: 162 RGASFTIFATLQLRPSQSTYLNMIWNRGSAVAGFSPLPHSLLPQDLRGFMSINV 323 GA+ TI AT++L P++ T L+ +WNRG V G+SP H DL ++++ Sbjct: 182 DGATVTIAATIRLSPNR-TKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI 234
>tr|A2XDH6|A2XDH6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10365 PE=4 SV=1 Length = 417
Score = 53.1 bits (126), Expect = 8e-06 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 11/114 (9%) Frame = +3
Query: 15 MVGASALVAFQ--AHNGTNVLPFKLSPAAQ-GGQRLVSGAVDMAIISRQA--------VI 161 M GA L AF + LPF LSP + LVS +D+ +++ A V Sbjct: 100 MTGARVLAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVGPARTVR 159
Query: 162 RGASFTIFATLQLRPSQSTYLNMIWNRGSAVAGFSPLPHSLLPQDLRGFMSINV 323 GA+ TI AT++L P++ T L+ +WNRG V G+SP H DL ++++ Sbjct: 160 DGATVTIAATIRLSPNR-TKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI 212
>tr|A6XN02|A6XN02_PRUPE Expressed protein (Fragment) OS=Prunus persica PE=4 SV=1 Length = 324
Score = 50.8 bits (120), Expect = 4e-05 Identities = 32/106 (30%), Positives = 58/106 (54%) Frame = +3
Query: 3 SSWGMVGASALVAFQAHNGTNVLPFKLSPAAQGGQRLVSGAVDMAIISRQAVIRGASFTI 182 +S GMVG+ A+VAF+ +G + SP G RL G + + AV I Sbjct: 24 TSTGMVGSQAIVAFKRTDG--AMSVYSSPIKSYGTRLEQGNLSFPLFDVSAVYENNQIVI 81
Query: 183 FATLQLRPSQSTYLNMIWNRGSAVAGFSPLPHSLLPQDLRGFMSIN 320 FAT+ L P+ ++ +N +W +G+ ++G +P HS+ +++ F +++ Sbjct: 82 FATVGL-PNNASVVNHVWQQGT-LSGNTPQMHSVSGPNVQSFGTLD 125
>tr|B6UBB1|B6UBB1_MAIZE Dopamine beta-monooxygenase OS=Zea mays PE=2 SV=1 Length = 408
Score = 50.4 bits (119), Expect = 5e-05 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 11/114 (9%) Frame = +3
Query: 15 MVGASALVAFQ--AHNGTNVLPFKLSPAAQ-GGQRLVSGAVDMAIISRQAVIR------- 164 M GA L AF + LPF LSP + LVS +D+ +++ A + Sbjct: 91 MTGARVLAAFADPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLASPARTVR 150
Query: 165 -GASFTIFATLQLRPSQSTYLNMIWNRGSAVAGFSPLPHSLLPQDLRGFMSINV 323 GA T+ AT++L P++ T ++ +WNRG V G+SP H DL ++++ Sbjct: 151 DGARVTVAATIRLSPNR-TRVHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI 203
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