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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960023
Clone id TST39A01NGRL0006_E11
Library
Length 613
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_E11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTTTAAGCAGGATGAAGCACAACAATGTTATCCCCAATGGCCACTTCAAGAAGGATTGG
CAGTCTTACGTGAGGACCTGGTTCAACCAGCCCGCAAGGAAGAAGCGCAGACGCCTTGCC
CGTCAAAAGAAGGCTGTGCGGATCTTCCCTCGTCCAACAAGCGGGCCTCTTCGCCCTGTT
GTGCATTCGCAAACACTCAAATACAACATGAAGGTCCGTGCTGGCCGCGGGTTTACCTTG
GAAGAGTTGAAGGTGGCGGGGATTTCCATAAAACTGGCACCAACCATAGGTATTGCAGTT
GATCATCGAAGGAAAAATCGATGCCTTGAAAGTCTCCAGTCGAATGTGCAGAGGCTTAAC
ACCTATAAAGCGAAATTGATTGTCTTCCCTCGCCGATCAAAGAAGACTAAGGCTGGTGAT
GCTAGCCAGGAGGAGCTTGCAAGTGCCATGCAGGTCCAGGGCCCTGTTATTCCTATTACT
CGGGAGAAGCCAGGTGTGGAGGTTGTTGCCATTACAGATGACTTGAAGGCCAACAAAGCT
TTTGCCAAGCTTCGACTGGAAAGGATGAATAAGCGCTTGATGGGTGTGCGCAAAAAGAGA
GCAGCAGAAGCTG
■■Homology search results ■■ -
sp_hit_id P41127
Definition sp|P41127|RL131_ARATH 60S ribosomal protein L13-1 OS=Arabidopsis thaliana
Align length 200
Score (bit) 283.0
E-value 5.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960023|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_E11, 5'
         (613 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P41127|RL131_ARATH 60S ribosomal protein L13-1 OS=Arabidopsis...   283   5e-76
sp|P41128|RL131_BRANA 60S ribosomal protein L13-1 OS=Brassica na...   279   9e-75
sp|P41129|RL132_BRANA 60S ribosomal protein L13-2 OS=Brassica na...   275   1e-73
sp|Q9FF90|RL133_ARATH 60S ribosomal protein L13-3 OS=Arabidopsis...   274   3e-73
sp|Q9SMT4|RL132_ARATH Putative 60S ribosomal protein L13-2 OS=Ar...   256   8e-68
sp|O48513|RL13_CHLSW 60S ribosomal protein L13 OS=Chlamydomonas ...   224   2e-58
sp|Q90Z10|RL13_DANRE 60S ribosomal protein L13 OS=Danio rerio GN...   213   8e-55
sp|P49627|RL13_TOBAC 60S ribosomal protein L13 OS=Nicotiana taba...   211   2e-54
sp|P41126|RL13_DROME 60S ribosomal protein L13 OS=Drosophila mel...   208   2e-53
sp|Q56JZ1|RL13_BOVIN 60S ribosomal protein L13 OS=Bos taurus GN=...   203   6e-52
sp|Q90YV5|RL13_ICTPU 60S ribosomal protein L13 OS=Ictalurus punc...   201   2e-51
sp|P41123|RL13_RAT 60S ribosomal protein L13 OS=Rattus norvegicu...   200   5e-51
sp|P47963|RL13_MOUSE 60S ribosomal protein L13 OS=Mus musculus G...   198   2e-50
sp|P26373|RL13_HUMAN 60S ribosomal protein L13 OS=Homo sapiens G...   197   4e-50
sp|P41125|RL13_CHICK 60S ribosomal protein L13 OS=Gallus gallus ...   195   2e-49
sp|Q9Z313|RL13_CRIGR 60S ribosomal protein L13 OS=Cricetulus gri...   194   3e-49
sp|Q962U1|RL13_SPOFR 60S ribosomal protein L13 OS=Spodoptera fru...   192   1e-48
sp|O74175|RL13_SCHPO 60S ribosomal protein L13 OS=Schizosaccharo...   172   1e-42
sp|Q95043|RL13_SCHMA 60S ribosomal protein L13 OS=Schistosoma ma...   165   2e-40
sp|P91128|RL13_CAEEL 60S ribosomal protein L13 OS=Caenorhabditis...   163   6e-40
sp|Q54E20|RL13_DICDI 60S ribosomal protein L13 OS=Dictyostelium ...   161   3e-39
sp|O46157|RL13_LUMRU 60S ribosomal protein L13 OS=Lumbricus rube...   154   5e-37
sp|Q12690|RL13A_YEAST 60S ribosomal protein L13-A OS=Saccharomyc...   140   4e-33
sp|P40212|RL13B_YEAST 60S ribosomal protein L13-B OS=Saccharomyc...   140   7e-33
sp|O59931|RL13_CANAL 60S ribosomal protein L13 OS=Candida albica...   139   9e-33
sp|Q876B2|RL13_SACEX 60S ribosomal protein L13 OS=Saccharomyces ...   132   2e-30
sp|Q97W05|RL13E_SULSO 50S ribosomal protein L13e OS=Sulfolobus s...    39   0.016
sp|P58469|RL13E_SULTO 50S ribosomal protein L13e OS=Sulfolobus t...    39   0.028
sp|Q9YEN9|RL13E_AERPE 50S ribosomal protein L13e OS=Aeropyrum pe...    38   0.036
sp|Q9SY33|PER7_ARATH Peroxidase 7 OS=Arabidopsis thaliana GN=PER...    37   0.10 

>sp|P41127|RL131_ARATH 60S ribosomal protein L13-1 OS=Arabidopsis
           thaliana GN=RPL13B PE=1 SV=1
          Length = 206

 Score =  283 bits (724), Expect = 5e-76
 Identities = 139/200 (69%), Positives = 158/200 (79%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           MKHNNVIPNGHFKK WQ+YV+TWFNQP                IFPRPTSGPLRPVVH Q
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYNMKVR G+GFTLEELK AGI  KLAPTIGIAVDHRRKNR LE LQ+NVQRL TYK 
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL++FPRR++K KAGD++ EELA+A QVQG  +PI REKP +E+V +T ++K+ KAF K+
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           RLER NKR  G R KRAAEA
Sbjct: 181 RLERTNKRHAGARAKRAAEA 200


>sp|P41128|RL131_BRANA 60S ribosomal protein L13-1 OS=Brassica napus
           PE=2 SV=1
          Length = 206

 Score =  279 bits (713), Expect = 9e-75
 Identities = 138/200 (69%), Positives = 157/200 (78%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           MKHNNVIPNGHFKK WQ+YV+TWFNQP                IFPRPT+GPLRPVVH Q
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQ 60

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYNMKVR G+GFTLEELK AGI  KLAPTIGIAVDHRRKNR LE LQSNVQRL TYKA
Sbjct: 61  TLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL++FPRR++K KAGD++ EELA+A QVQG  +PI REK   E+V +T ++K+ KAF K+
Sbjct: 121 KLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKI 180

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           RLER NKR  G R KRAA+A
Sbjct: 181 RLERTNKRHAGARAKRAADA 200


>sp|P41129|RL132_BRANA 60S ribosomal protein L13-2 OS=Brassica napus
           PE=2 SV=1
          Length = 206

 Score =  275 bits (704), Expect = 1e-73
 Identities = 134/200 (67%), Positives = 157/200 (78%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           MKHNNVIPNGHFKK WQ+YV+TWFNQP                IFPRPT+GPLRPVVH Q
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQ 60

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYNMKVR G+GFTLEELK AGI  KLAPTIGI++DHRRKNR LE LQSNVQRL TYKA
Sbjct: 61  TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL++FPRR++K KAGD++ EELA+A QVQG  +PI REK  +E+V +T ++K+  A+ K+
Sbjct: 121 KLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKI 180

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           RLER NKR  G R KRAA+A
Sbjct: 181 RLERTNKRHAGARAKRAADA 200


>sp|Q9FF90|RL133_ARATH 60S ribosomal protein L13-3 OS=Arabidopsis
           thaliana GN=RPL13D PE=2 SV=1
          Length = 206

 Score =  274 bits (700), Expect = 3e-73
 Identities = 138/200 (69%), Positives = 156/200 (78%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           MKHNNVIP+ HF+K WQ+YV+TWFNQP                IFPRPTSGPLRPVVH Q
Sbjct: 1   MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQ 60

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYNMKVRAG+GFTLEELKVAGI  KLAPTIGI+VDHRRKNR LE LQSNVQRL TYKA
Sbjct: 61  TLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKA 120

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPRRS++ KAGD++ EELA+A QVQG  +PI   K  +E+V +T DLKA KA+ K+
Sbjct: 121 KLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           RLER N R  G R KRAAEA
Sbjct: 181 RLERTNARHAGARAKRAAEA 200


>sp|Q9SMT4|RL132_ARATH Putative 60S ribosomal protein L13-2
           OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1
          Length = 206

 Score =  256 bits (653), Expect = 8e-68
 Identities = 127/200 (63%), Positives = 152/200 (76%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           MKHNNVIPNGHFKK W++YV+T FNQP                IFPRPT+GP+RPVVH+Q
Sbjct: 1   MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQ 60

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TL YNMKVRAG+GFTLEELK AGI  KLAPTIGI+VDH RKNR LE  Q+NVQRL TYKA
Sbjct: 61  TLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKA 120

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL++FPR ++  K GD++Q+ELA+A QVQ   +PI RE P +E+V +T D+K   A+ K+
Sbjct: 121 KLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKI 180

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           RLE +NKR  GVR KRAAEA
Sbjct: 181 RLEGINKRHAGVRAKRAAEA 200


>sp|O48513|RL13_CHLSW 60S ribosomal protein L13 OS=Chlamydomonas sp.
           (strain W80) GN=RPL13 PE=2 SV=1
          Length = 208

 Score =  224 bits (572), Expect = 2e-58
 Identities = 107/199 (53%), Positives = 141/199 (70%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           ++ N+++PNGHF K WQ +V+TWFNQP                 FPRP +G L+P+V  Q
Sbjct: 2   VRGNDMLPNGHFHKKWQFHVKTWFNQPARKQRRRNARAEKAKATFPRPVAGSLKPIVRCQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           T+KYN K R GRGFTLEELK AGI  K APT+GIAVDHRRKNR LE+LQ+NVQRL TY+A
Sbjct: 62  TVKYNTKQRLGRGFTLEELKEAGIPAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
            L++FPR  KK KA +AS  + ++A Q +G ++P+   KP +E+V IT D+K    + KL
Sbjct: 122 SLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELVKITADMKEGSQYGKL 181

Query: 553 RLERMNKRLMGVRKKRAAE 609
           R+ER+N RL G+R+KRAA+
Sbjct: 182 RIERVNARLKGMREKRAAD 200


>sp|Q90Z10|RL13_DANRE 60S ribosomal protein L13 OS=Danio rerio
           GN=rpl13 PE=2 SV=3
          Length = 211

 Score =  213 bits (541), Expect = 8e-55
 Identities = 110/197 (55%), Positives = 134/197 (68%)
 Frame = +1

Query: 22  NNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLK 201
           N +I N HF KDWQ  VRTWFNQP                I PRP SGPLRPVV   T++
Sbjct: 6   NGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIR 65

Query: 202 YNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLI 381
           Y+ KVRAGRGFTLEELK AGI+ K+A TIGI+VD RR+NR  ESLQ+NVQRL  Y+ KLI
Sbjct: 66  YHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLI 125

Query: 382 VFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLE 561
           +FPR++ K K GD+++EEL  A Q+ GPV+PI +     +   I++D K  KAFA LR+ 
Sbjct: 126 IFPRKAAKPKKGDSTEEELKMATQLTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMA 185

Query: 562 RMNKRLMGVRKKRAAEA 612
           R N RL G+R KRA EA
Sbjct: 186 RANARLFGIRAKRAKEA 202


>sp|P49627|RL13_TOBAC 60S ribosomal protein L13 OS=Nicotiana tabacum
           GN=RPL13 PE=2 SV=1
          Length = 202

 Score =  211 bits (537), Expect = 2e-54
 Identities = 107/192 (55%), Positives = 133/192 (69%)
 Frame = +1

Query: 37  NGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLKYNMKV 216
           NGHFKK WQ+YV+TWFNQP                I PRPT+G LRP+VH QTLKYNMKV
Sbjct: 5   NGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKISPRPTAGTLRPIVHGQTLKYNMKV 64

Query: 217 RAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLIVFPRR 396
           R+GRGF+LEELK AGI  KLAPTIGIAVDHRR+NR LE LQ+NVQRL   + +L+VFPRR
Sbjct: 65  RSGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRR 124

Query: 397 SKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLERMNKR 576
           + +++          +A QV G  +PI REK  + +  +   +K+  A+AKLR+ER N+R
Sbjct: 125 ASRSRLVILPPRNCLTATQVHGAYMPIEREKHQLILSKVLKKMKSFNAYAKLRVERTNER 184

Query: 577 LMGVRKKRAAEA 612
            +G R KRAAEA
Sbjct: 185 HIGARMKRAAEA 196


>sp|P41126|RL13_DROME 60S ribosomal protein L13 OS=Drosophila
           melanogaster GN=RpL13 PE=1 SV=1
          Length = 218

 Score =  208 bits (529), Expect = 2e-53
 Identities = 109/200 (54%), Positives = 134/200 (67%), Gaps = 1/200 (0%)
 Frame = +1

Query: 16  KHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQT 195
           K NN+IPN H+ K WQ +V+TWFNQP                +FPRP SG LRPVV   T
Sbjct: 3   KGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPT 62

Query: 196 LKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAK 375
           ++Y+ K+RAGRGFTLEELK AGI    A TIGIAVD RRKN+ LES Q N+QRL  Y++K
Sbjct: 63  IRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSK 122

Query: 376 LIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPG-VEVVAITDDLKANKAFAKL 552
           LI+FP   KK +AG++S EE   A Q++GPV+PI  E+P  VE   +T D K  KAFA L
Sbjct: 123 LILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATL 182

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R  R + RL+G+R KRA EA
Sbjct: 183 RKARTDARLVGIRAKRAKEA 202


>sp|Q56JZ1|RL13_BOVIN 60S ribosomal protein L13 OS=Bos taurus
           GN=RPL13 PE=2 SV=3
          Length = 211

 Score =  203 bits (516), Expect = 6e-52
 Identities = 107/197 (54%), Positives = 130/197 (65%)
 Frame = +1

Query: 22  NNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQTLK 201
           N +I   HF KDWQ  V TWFNQP                I PRP SGPLRPVV   T++
Sbjct: 6   NGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPLRPVVRCPTVR 65

Query: 202 YNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKAKLI 381
           Y+ KVRAGRGF+LEEL+VAGI  K+A TIGI+VD RR+N+C ESLQ+NVQRL  Y++KLI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLI 125

Query: 382 VFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKLRLE 561
           +FPR+    K GD+S EEL  A Q+ GPV+PI       +   IT++ K  KAFA LR+ 
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMA 185

Query: 562 RMNKRLMGVRKKRAAEA 612
           R N RL G+R KRA EA
Sbjct: 186 RANARLFGIRAKRAKEA 202
tr_hit_id A9SVU5
Definition tr|A9SVU5|A9SVU5_PHYPA 60S ribosomal protein L13 OS=Physcomitrella patens subsp. patens
Align length 200
Score (bit) 296.0
E-value 6.0e-79
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960023|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_E11, 5'
         (613 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SVU5|A9SVU5_PHYPA 60S ribosomal protein L13 OS=Physcomitrel...   296   6e-79
tr|A9S995|A9S995_PHYPA 60S ribosomal protein L13 OS=Physcomitrel...   295   2e-78
tr|A9U376|A9U376_PHYPA 60S ribosomal protein L13 OS=Physcomitrel...   293   5e-78
tr|A9S4N9|A9S4N9_PHYPA 60S ribosomal protein L13 OS=Physcomitrel...   290   6e-77
tr|A7PRE6|A7PRE6_VITVI 60S ribosomal protein L13 OS=Vitis vinife...   290   6e-77
tr|A9RPU7|A9RPU7_PHYPA 60S ribosomal protein L13 OS=Physcomitrel...   289   1e-76
tr|A5CB91|A5CB91_VITVI 60S ribosomal protein L13 OS=Vitis vinife...   288   2e-76
tr|Q3HRY7|Q3HRY7_SOLTU 60S ribosomal protein L13 OS=Solanum tube...   286   9e-76
tr|Q9AVT4|Q9AVT4_PICAB 60S ribosomal protein L13 OS=Picea abies ...   285   1e-75
tr|B8LQY1|B8LQY1_PICSI Putative uncharacterized protein OS=Picea...   284   3e-75
tr|A9NXV5|A9NXV5_PICSI 60S ribosomal protein L13 OS=Picea sitche...   284   3e-75
tr|A9NTR4|A9NTR4_PICSI 60S ribosomal protein L13 OS=Picea sitche...   283   4e-75
tr|B3TM25|B3TM25_ELAGV 60S ribosomal protein L13E OS=Elaeis guin...   282   1e-74
tr|Q9LWS2|Q9LWS2_ORYSJ 60S ribosomal protein L13 OS=Oryza sativa...   282   1e-74
tr|A5AZF5|A5AZF5_VITVI 60S ribosomal protein L13 OS=Vitis vinife...   282   1e-74
tr|A2Y8K1|A2Y8K1_ORYSI 60S ribosomal protein L13 OS=Oryza sativa...   282   1e-74
tr|A7QLM4|A7QLM4_VITVI 60S ribosomal protein L13 OS=Vitis vinife...   281   2e-74
tr|Q6TKT4|Q6TKT4_SOLBR 60S ribosomal protein L13 (Fragment) OS=S...   281   3e-74
tr|B7FGS0|B7FGS0_MEDTR Putative uncharacterized protein OS=Medic...   281   3e-74
tr|B3TM24|B3TM24_ELAGV 60S ribosomal protein L13E OS=Elaeis guin...   281   3e-74
tr|A9PAV6|A9PAV6_POPTR 60S ribosomal protein L13 OS=Populus tric...   279   1e-73
tr|Q8S9G2|Q8S9G2_ORYSA 60S ribosomal protein L13 OS=Oryza sativa...   278   2e-73
tr|Q7XJB4|Q7XJB4_ORYSJ 60S ribosomal protein L13 OS=Oryza sativa...   278   2e-73
tr|A2XIT5|A2XIT5_ORYSI 60S ribosomal protein L13 OS=Oryza sativa...   278   2e-73
tr|B7FGV8|B7FGV8_MEDTR Putative uncharacterized protein OS=Medic...   277   3e-73
tr|A8MQA1|A8MQA1_ARATH 60S ribosomal protein L13 OS=Arabidopsis ...   276   7e-73
tr|B7FMY6|B7FMY6_MEDTR Putative uncharacterized protein OS=Medic...   276   9e-73
tr|A1YMY6|A1YMY6_BRACM 60S ribosomal protein L13 OS=Brassica cam...   275   2e-72
tr|B6UIJ6|B6UIJ6_MAIZE 60S ribosomal protein L13-2 OS=Zea mays P...   273   4e-72
tr|B6T5F2|B6T5F2_MAIZE 60S ribosomal protein L13-2 OS=Zea mays P...   273   8e-72

>tr|A9SVU5|A9SVU5_PHYPA 60S ribosomal protein L13 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_188911 PE=3 SV=1
          Length = 207

 Score =  296 bits (758), Expect = 6e-79
 Identities = 142/200 (71%), Positives = 166/200 (83%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNVIPNGHFKKDWQ+YVRTWFNQP                +FPRPT+GPLRPVVHSQ
Sbjct: 2   VKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKAVAVFPRPTAGPLRPVVHSQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYN K+R+GRGFTLEELK AGI  KLAPTIGIAVDHRRKNRCLESLQ NV RLNTY+A
Sbjct: 62  TLKYNSKIRSGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNTYRA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPRRSKKTKAGD+S EEL+S  QV GPV+PI + +P V++V+ITD++K+ K + KL
Sbjct: 122 KLVVFPRRSKKTKAGDSSAEELSSFTQVIGPVLPIVKPRPTVDIVSITDEMKSQKGYYKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R ERMN+RL+GVRKK+A +A
Sbjct: 182 RQERMNERLVGVRKKKAEQA 201


>tr|A9S995|A9S995_PHYPA 60S ribosomal protein L13 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_182493 PE=3 SV=1
          Length = 207

 Score =  295 bits (754), Expect = 2e-78
 Identities = 140/200 (70%), Positives = 165/200 (82%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNVIPNGHFKKDWQ+YVRTWFNQP                +FPRPT+GPLRPVVHSQ
Sbjct: 2   VKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKAVAVFPRPTAGPLRPVVHSQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYN K+R+GRGFTLEELK AGI  KLAPTIGIAVDHRRKNRCLESLQ N+ RLNTY+A
Sbjct: 62  TLKYNSKIRSGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENINRLNTYRA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPRRSKKTKAGDA+ EEL+S  Q+  PV+PI + +P  E+V+ITD++K+ K + KL
Sbjct: 122 KLVVFPRRSKKTKAGDATAEELSSVTQLTRPVLPIVKPQPTAEIVSITDEMKSQKGYYKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           RLERMN+RL+GVRKK+A +A
Sbjct: 182 RLERMNERLVGVRKKKAEQA 201


>tr|A9U376|A9U376_PHYPA 60S ribosomal protein L13 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_227920 PE=3 SV=1
          Length = 207

 Score =  293 bits (750), Expect = 5e-78
 Identities = 141/200 (70%), Positives = 162/200 (81%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNVIPNGHFKKDWQ+YVRTWFNQP                +FPRPT+GPLRPVVHSQ
Sbjct: 2   VKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQRKAVAVFPRPTAGPLRPVVHSQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TL+YN K+RAGRGFTLEELK AGI  KLAPTIGIAVDHRRKNRCLESLQ NV RLN Y+A
Sbjct: 62  TLRYNAKIRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNMYRA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPRRSKKTKAGDAS EEL+S  QV G V+PI + +P  E+V+ITD++KA   + KL
Sbjct: 122 KLVVFPRRSKKTKAGDASAEELSSVTQVTGDVLPIVKSRPSAEIVSITDEMKAQMGYYKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R ERMN+RL+GVRKK+A +A
Sbjct: 182 RQERMNERLVGVRKKKAEQA 201


>tr|A9S4N9|A9S4N9_PHYPA 60S ribosomal protein L13 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_181260 PE=3 SV=1
          Length = 207

 Score =  290 bits (741), Expect = 6e-77
 Identities = 138/200 (69%), Positives = 161/200 (80%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNVIPNGHFKKDWQ+YVRTWFNQP                +FPRPT+GPLRPVVHSQ
Sbjct: 2   VKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKSVAVFPRPTAGPLRPVVHSQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYN K+RAGRGFTLEELK AG+  KLAPTIGIAVDHRRKNRCLESLQ NV RLNTY+A
Sbjct: 62  TLKYNAKIRAGRGFTLEELKAAGVPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNTYRA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPR SKKTKAGDAS EEL+S  Q  G  +PI + +P  E+V+ITD++K+ + + KL
Sbjct: 122 KLVVFPRLSKKTKAGDASAEELSSVTQATGEFLPIVKPRPSAEIVSITDEMKSQRGYYKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R ERMN+RL+GVRKK+A +A
Sbjct: 182 RQERMNERLVGVRKKKAEQA 201


>tr|A7PRE6|A7PRE6_VITVI 60S ribosomal protein L13 OS=Vitis vinifera
           GN=GSVIVT00022475001 PE=3 SV=1
          Length = 207

 Score =  290 bits (741), Expect = 6e-77
 Identities = 142/200 (71%), Positives = 166/200 (83%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNV+PNGHFKK WQ+YV+TWFNQP                IFPRPTSGPLRP+VH Q
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHGQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYNMKVRAGRGF+LEELKVAGI  KLAPTIGIAVDHRR+NR LESLQ+NVQRL TYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKVAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPRR++K KAGD+S EELA+A QVQG  +PI REKP VE+V +TD++K+ KA+ KL
Sbjct: 122 KLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R+ERMN+R +GVR K+AAEA
Sbjct: 182 RVERMNQRHVGVRMKKAAEA 201


>tr|A9RPU7|A9RPU7_PHYPA 60S ribosomal protein L13 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_204501 PE=3 SV=1
          Length = 207

 Score =  289 bits (739), Expect = 1e-76
 Identities = 137/200 (68%), Positives = 165/200 (82%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNVIPNGHFKKDWQ+YVRTWFNQP                +FPRPT+GPLRPVVHSQ
Sbjct: 2   VKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKAAAVFPRPTAGPLRPVVHSQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TL+YN K+RAGRGFTL+ELK AGI  KLAPTIGIAVDHRRKNRCLESLQ NV RLNTY+A
Sbjct: 62  TLRYNAKIRAGRGFTLDELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNTYRA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPRR++K+KAGDA+ EEL+SA QV   V+PI + +P VE+V++TD++K+ K + KL
Sbjct: 122 KLVVFPRRARKSKAGDATAEELSSATQVTRSVLPIVKPRPTVEIVSVTDEMKSQKGYYKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R ERMN+RL+GVRKK+A +A
Sbjct: 182 RQERMNERLVGVRKKKAEQA 201


>tr|A5CB91|A5CB91_VITVI 60S ribosomal protein L13 OS=Vitis vinifera
           GN=VITISV_018882 PE=3 SV=1
          Length = 207

 Score =  288 bits (737), Expect = 2e-76
 Identities = 141/200 (70%), Positives = 165/200 (82%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNV+PNGHFKK WQ+YV+TWFNQP                IFPRPTSGPLRP+VH Q
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPIVHGQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYNMKVRAGRGF+LEELK AGI  KLAPTIGIAVDHRR+NR LESLQ+NVQRL TYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPRR++K KAGD+S EELA+A QVQG  +PI REKP VE+V +TD++K+ KA+ KL
Sbjct: 122 KLVVFPRRTRKFKAGDSSVEELATATQVQGLYMPIVREKPTVELVKVTDEMKSFKAYGKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R+ERMN+R +GVR K+AAEA
Sbjct: 182 RVERMNQRHVGVRMKKAAEA 201


>tr|Q3HRY7|Q3HRY7_SOLTU 60S ribosomal protein L13 OS=Solanum
           tuberosum PE=2 SV=1
          Length = 206

 Score =  286 bits (731), Expect = 9e-76
 Identities = 140/200 (70%), Positives = 160/200 (80%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           MKHNNVIPNGHFKK WQ+YVRTWFNQP                IFPRPT+G LRP+VH Q
Sbjct: 1   MKHNNVIPNGHFKKHWQNYVRTWFNQPARKTRRRAARQQKAVKIFPRPTAGSLRPIVHGQ 60

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           TLKYNMKVRAGRGF+LEELK AGI  KLAPTIGIAVDHRR+NR LE LQ+NVQRL TYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 120

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL++FPRR+KK KAGD+S EELA+A QVQG  +PITRE+P V+ V +TD++K+ KA+ KL
Sbjct: 121 KLVIFPRRAKKVKAGDSSAEELATATQVQGSYLPITREQPAVDFVKVTDEMKSFKAYGKL 180

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R+ER N R MG R KRAAEA
Sbjct: 181 RIERTNARHMGARLKRAAEA 200


>tr|Q9AVT4|Q9AVT4_PICAB 60S ribosomal protein L13 OS=Picea abies
           PE=2 SV=1
          Length = 207

 Score =  285 bits (729), Expect = 1e-75
 Identities = 139/200 (69%), Positives = 164/200 (82%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNV+PNGHFKK WQ+YV+TWFNQP                IFPRPT+GPLRP+VH Q
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKKRRRIARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           T KYNMKVRAGRGF+LEELK AGI  KLAPTIGIAVDHRR+NR LESLQ+NVQRL TYKA
Sbjct: 62  TQKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPR ++K KAGD+S EELA+A QVQG  + IT+EKP +E+V +TD++K  KA+AKL
Sbjct: 122 KLVVFPRTARKLKAGDSSPEELATATQVQGKYMTITQEKPSLELVKVTDEMKNFKAYAKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R+ERMNKRL+GVR K+AAEA
Sbjct: 182 RVERMNKRLVGVRLKKAAEA 201


>tr|B8LQY1|B8LQY1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 207

 Score =  284 bits (726), Expect = 3e-75
 Identities = 136/200 (68%), Positives = 162/200 (81%)
 Frame = +1

Query: 13  MKHNNVIPNGHFKKDWQSYVRTWFNQPXXXXXXXXXXXXXXXXIFPRPTSGPLRPVVHSQ 192
           +KHNNV+PNGHFKK WQ+YV+TWFNQP                IFPRPTSGPLRP+VH Q
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKKRRRIARQKKAVKIFPRPTSGPLRPIVHGQ 61

Query: 193 TLKYNMKVRAGRGFTLEELKVAGISIKLAPTIGIAVDHRRKNRCLESLQSNVQRLNTYKA 372
           T KYNMK+RAGRGF+LEELK AGI  K APTIGIAVDHRR+NR LE LQ+NVQRL TYKA
Sbjct: 62  TQKYNMKIRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 121

Query: 373 KLIVFPRRSKKTKAGDASQEELASAMQVQGPVIPITREKPGVEVVAITDDLKANKAFAKL 552
           KL+VFPR + K KAGD+SQEELA+A QVQG  +PI++EKP V+++ +TD++K  KA+AKL
Sbjct: 122 KLVVFPRSAGKLKAGDSSQEELATATQVQGTYMPISQEKPSVDIIKVTDEMKNFKAYAKL 181

Query: 553 RLERMNKRLMGVRKKRAAEA 612
           R+ERMNKRL+G R K+AAEA
Sbjct: 182 RVERMNKRLVGARMKKAAEA 201