DK960024
Clone id TST39A01NGRL0006_E12
Library
Length 639
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_E12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
ATGGAGTCCACCCACAATGATCTCTCTTCTGCTGAGCTCTCCAGCTGTGACATGGAGTTG
GAACCAGAGGAGTTCGTGCTGGCAGACATCGTCGAGTCCAGCCCGTTCGGATACATAAAG
TCGCTGTTTAAGTCCTGGTCTAAAGATGGAGTTCCGCCGCTTTCCAAGCAGGGCGTTGGG
ACGACCGACCACAGTGCTACCGGGGTTAGTCCGAGCTTGAAGACATCCGGACACACAACC
TGTCGCAACTATCATCTGAGCTGGGCAGCCATATGCTCCATCATTCTCATGAAGATTCTC
CTCCTCTTTGCCACCCCTGTTGAGATCTTTGGAAACATTCTGGAGTATATCCTGAATCTG
TTTTACATGAACAATGGTCTCAGGGCCTTTTTTGTTACGCTCTTTTTTGACCTTGGTAAG
CCCAATTAGTTTCAGCTCAATCTCCAGCTCTTTGGGCAGTCTATTACTACTTTTTCTGTC
TGATAATTCTGCGTTAAAGGGATGACTTATGTATTGGAGCTCTCTCCACACACACACACA
CACACACACACCCCTTCCATGCATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCACACACACACACACACACACACACACACACA
■■Homology search results ■■ -
sp_hit_id Q5U2X2
Definition sp|Q5U2X2|SPAG1_RAT Sperm-associated antigen 1 OS=Rattus norvegicus
Align length 140
Score (bit) 32.0
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960024|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_E12, 5'
(639 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5U2X2|SPAG1_RAT Sperm-associated antigen 1 OS=Rattus norvegi... 32 2.8
sp|Q5F464|LPP_CHICK Lipoma-preferred partner homolog OS=Gallus g... 32 2.8
sp|Q9Y566|SHAN1_HUMAN SH3 and multiple ankyrin repeat domains pr... 30 8.1
sp|Q5RF36|NARFL_PONAB Nuclear prelamin A recognition factor-like... 30 8.1
sp|Q9H6Q4|NARFL_HUMAN Nuclear prelamin A recognition factor-like... 30 8.1
sp|Q8TSH7|MDH_METAC Malate dehydrogenase OS=Methanosarcina aceti... 30 8.1

>sp|Q5U2X2|SPAG1_RAT Sperm-associated antigen 1 OS=Rattus norvegicus
GN=Spag1 PE=2 SV=1
Length = 893

Score = 32.0 bits (71), Expect = 2.8
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = -1

Query: 420 LTKVKKERNKKGPETIVHVKQIQDILQNVSKDLNRGGKEEENLHENDGAYGCPAQMIVAT 241
L++V++E P + + K + +++ V + GGK +E+ HE+DG + A
Sbjct: 320 LSEVERELKNSEPASELQTKGKRMVIEEVENSGDEGGKGDEDDHEDDGV------DMAAM 373

Query: 240 GCVSGCLQARTNPGSTVVGRPNALLGKRRNSIFRPGLKQRLYVSERAGLDDVCQHELLWF 61
G + L R+ G RR PG +Q+ E H+L
Sbjct: 374 GNIQKKLMVRSQGGRR----------SRRARTPMPGAEQQEGQPETGTASTSDNHDLEER 423

Query: 60 QLHVTAGELSRR--EIIVGG 7
+ + G+L R E+ GG
Sbjct: 424 RAADSPGDLKSRGNELFRGG 443


>sp|Q5F464|LPP_CHICK Lipoma-preferred partner homolog OS=Gallus
gallus GN=LPP PE=2 SV=1
Length = 604

Score = 32.0 bits (71), Expect = 2.8
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1

Query: 40 SSCDMELEPEEFVLADIVESSPFGYIKSLFKSWSKDGVPPLSKQGVGTTDHSATGVSPSL 219
SS D E++ +LAD+ SSP+ P +QG GT+ +AT S S
Sbjct: 114 SSLDAEIDSLTSILADLESSSPY---------------KPRIQQGSGTSSSAATTPSVST 158

Query: 220 KTSGH 234
+GH
Sbjct: 159 PVTGH 163


>sp|Q9Y566|SHAN1_HUMAN SH3 and multiple ankyrin repeat domains protein
1 OS=Homo sapiens GN=SHANK1 PE=1 SV=1
Length = 2161

Score = 30.4 bits (67), Expect = 8.1
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1

Query: 115 IKSLFKSWSKDGVPPL-SKQGVGTTDHSATG-VSPSLKTSGHTT 240
+ SLF++W K +PPL + GV T +A G SPS +S +T
Sbjct: 1937 VSSLFQNWPKPPLPPLPTGTGVSPTAAAAPGATSPSASSSSTST 1980


>sp|Q5RF36|NARFL_PONAB Nuclear prelamin A recognition factor-like
protein OS=Pongo abelii GN=NARFL PE=2 SV=1
Length = 476

Score = 30.4 bits (67), Expect = 8.1
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 8/96 (8%)
Frame = -1

Query: 315 GGKEEENLHENDGAYGCPAQMIVATGCVSGC------LQARTNPGSTVVGRPNALLGKRR 154
G + +NL + CP + C SGC LQA P ++ L G R
Sbjct: 369 GFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPSRELLQHVERLYGMVR 428

Query: 153 NSI--FRPGLKQRLYVSERAGLDDVCQHELLWFQLH 52
PG+ Q LY G D C LL Q H
Sbjct: 429 AEAPEDAPGV-QELYTHWLQGTDSECAGRLLHTQYH 463


>sp|Q9H6Q4|NARFL_HUMAN Nuclear prelamin A recognition factor-like
protein OS=Homo sapiens GN=NARFL PE=1 SV=1
Length = 476

Score = 30.4 bits (67), Expect = 8.1
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 8/96 (8%)
Frame = -1

Query: 315 GGKEEENLHENDGAYGCPAQMIVATGCVSGC------LQARTNPGSTVVGRPNALLGKRR 154
G + +NL + CP + C SGC LQA P ++ L G R
Sbjct: 369 GFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPSRELLQHVERLYGMVR 428

Query: 153 NSI--FRPGLKQRLYVSERAGLDDVCQHELLWFQLH 52
PG+ Q LY G D C LL Q H
Sbjct: 429 AEAPEDAPGV-QELYTHWLQGTDSECAGRLLHTQYH 463


>sp|Q8TSH7|MDH_METAC Malate dehydrogenase OS=Methanosarcina
acetivorans GN=mdh PE=3 SV=1
Length = 307

Score = 30.4 bits (67), Expect = 8.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1

Query: 55 ELEPEEFVLADIVESSPFGYIKSLFKSWSKDGVPPLSKQGVGTTDHS 195
ELEP E V+ DIVE P G L ++ + +G Q GT D++
Sbjct: 22 ELEPGEIVMTDIVEGLPQGKALDLMQAGAING---YDTQVTGTNDYA 65


tr_hit_id Q1W632
Definition tr|Q1W632|Q1W632_RICCO LipRC1p OS=Ricinus communis
Align length 43
Score (bit) 42.7
E-value 0.019
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960024|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_E12, 5'
(639 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1W632|Q1W632_RICCO LipRC1p OS=Ricinus communis PE=2 SV=1 43 0.019
tr|A0T1K1|A0T1K1_RICCO Acidic triacylglycerol lipase 2 OS=Ricinu... 43 0.019
tr|A5ALY8|A5ALY8_VITVI Putative uncharacterized protein OS=Vitis... 41 0.054
tr|Q9LUL3|Q9LUL3_ARATH Genomic DNA, chromosome 3, P1 clone: MLN2... 40 0.12
tr|Q93ZZ5|Q93ZZ5_ARATH Putative uncharacterized protein At3g1436... 40 0.12
tr|Q8H1D5|Q8H1D5_ARATH Putative uncharacterized protein At3g1436... 40 0.12
tr|A7P696|A7P696_VITVI Chromosome chr9 scaffold_7, whole genome ... 39 0.27
tr|Q5VKJ7|Q5VKJ7_RICCO Lipase OS=Ricinus communis GN=OBL1 PE=2 SV=1 39 0.35
tr|Q5S8F1|Q5S8F1_RICCO Lipase OS=Ricinus communis GN=OBL2 PE=2 SV=1 37 0.78
tr|A9PEF2|A9PEF2_POPTR Putative uncharacterized protein OS=Popul... 37 0.78
tr|Q4XJT6|Q4XJT6_PLACH Putative uncharacterized protein (Fragmen... 30 1.1
tr|Q3Z8J3|Q3Z8J3_DEHE1 Metallopeptidase, M24 family OS=Dehalococ... 35 3.0
tr|A9RBS5|A9RBS5_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.0
tr|Q4T1K3|Q4T1K3_TETNG Chromosome 16 SCAF10562, whole genome sho... 27 3.0
tr|A9V347|A9V347_MONBE Ubiquitin carboxyl-terminal hydrolase OS=... 28 3.2
tr|B8LK97|B8LK97_PICSI Putative uncharacterized protein OS=Picea... 35 3.9
tr|A7NTX4|A7NTX4_VITVI Chromosome chr18 scaffold_1, whole genome... 35 3.9
tr|A9VA29|A9VA29_MONBE Predicted protein OS=Monosiga brevicollis... 27 5.2
tr|A9RBT5|A9RBT5_PHYPA Predicted protein OS=Physcomitrella paten... 34 6.6
tr|Q2NV84|Q2NV84_SODGM Cytochrome o ubiquinol oxidase subunit I ... 34 8.7
tr|Q8L7S1|Q8L7S1_ARATH At1g45200 (At1g45200/At1g45200) OS=Arabid... 34 8.7
tr|Q2V4I5|Q2V4I5_ARATH Uncharacterized protein At1g45201.2 OS=Ar... 34 8.7
tr|B6TZH5|B6TZH5_MAIZE Putative uncharacterized protein OS=Zea m... 34 8.7
tr|Q4Y6J9|Q4Y6J9_PLACH Putative uncharacterized protein OS=Plasm... 34 8.7
tr|Q4T2J6|Q4T2J6_TETNG Chromosome undetermined SCAF10255, whole ... 27 8.9

>tr|Q1W632|Q1W632_RICCO LipRC1p OS=Ricinus communis PE=2 SV=1
Length = 526

Score = 42.7 bits (99), Expect = 0.019
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1

Query: 250 YHLSWAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNG 378
Y+ W+ S+++ K L LF TP+EI G + E+ LN +Y N+G
Sbjct: 54 YYSRWSV--SVLICKTLKLFETPLEILGRVTEFSLNFYYQNHG 94


>tr|A0T1K1|A0T1K1_RICCO Acidic triacylglycerol lipase 2 OS=Ricinus
communis PE=2 SV=1
Length = 526

Score = 42.7 bits (99), Expect = 0.019
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1

Query: 250 YHLSWAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNG 378
Y+ W+ S+++ K L LF TP+EI G + E+ LN +Y N+G
Sbjct: 54 YYSRWSV--SVLICKTLKLFETPLEILGRVTEFSLNFYYQNHG 94


>tr|A5ALY8|A5ALY8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_027895 PE=4 SV=1
Length = 487

Score = 41.2 bits (95), Expect = 0.054
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1

Query: 262 WAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNGLRAFFVTL 402
W + S+I KI+ +F P+E G ++E++LNLF N L F L
Sbjct: 61 WVILVSVIACKIIAVFGKPMEWTGCLVEFLLNLFSQNGSLLGLFYNL 107


>tr|Q9LUL3|Q9LUL3_ARATH Genomic DNA, chromosome 3, P1 clone: MLN21
OS=Arabidopsis thaliana PE=4 SV=1
Length = 507

Score = 40.0 bits (92), Expect = 0.12
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1

Query: 262 WAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNGLRAFFVTL 402
W + SI++ KI+ L TP+E G ++++ LNLF N G + L
Sbjct: 70 WVIVVSILVRKIIRLLRTPMEFTGFVVDFFLNLFSANGGFFGLLLRL 116


>tr|Q93ZZ5|Q93ZZ5_ARATH Putative uncharacterized protein At3g14360
OS=Arabidopsis thaliana GN=At3g14360 PE=2 SV=1
Length = 469

Score = 40.0 bits (92), Expect = 0.12
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1

Query: 262 WAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNGLRAFFVTL 402
W + SI++ KI+ L TP+E G ++++ LNLF N G + L
Sbjct: 21 WVIVVSILVRKIIRLLRTPMEFTGFVVDFFLNLFSANGGFFGLLLRL 67


>tr|Q8H1D5|Q8H1D5_ARATH Putative uncharacterized protein At3g14360
OS=Arabidopsis thaliana GN=At3g14360 PE=2 SV=1
Length = 469

Score = 40.0 bits (92), Expect = 0.12
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1

Query: 262 WAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNGLRAFFVTL 402
W + SI++ KI+ L TP+E G ++++ LNLF N G + L
Sbjct: 21 WVIVVSILVRKIIRLLRTPMEFTGFVVDFFLNLFSANGGFFGLLLRL 67


>tr|A7P696|A7P696_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00033982001
PE=4 SV=1
Length = 510

Score = 38.9 bits (89), Expect = 0.27
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1

Query: 262 WAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNGLRAFFVTL 402
W + S+I KI+ +F P+E G ++E++LNLF N L L
Sbjct: 61 WVILVSVIACKIIAVFGKPMEWTGCLVEFLLNLFSQNGSLLGLLYNL 107


>tr|Q5VKJ7|Q5VKJ7_RICCO Lipase OS=Ricinus communis GN=OBL1 PE=2 SV=1
Length = 526

Score = 38.5 bits (88), Expect = 0.35
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1

Query: 250 YHLSWAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNGLRAFFVTLF 405
Y+ W S+ + KIL LF P + G++ +++LN +Y N+G +F
Sbjct: 54 YYSRWPV--SVFICKILQLFQMPAAMLGHLTDFLLNFYYQNHGFLGILRNIF 103


>tr|Q5S8F1|Q5S8F1_RICCO Lipase OS=Ricinus communis GN=OBL2 PE=2 SV=1
Length = 519

Score = 37.4 bits (85), Expect = 0.78
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1

Query: 262 WAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNG 378
W + SII+ ++L L TP++ G ++++ LNL N+G
Sbjct: 61 WILLVSIIIRRVLALIDTPLKYLGYVIDFFLNLISQNSG 99


>tr|A9PEF2|A9PEF2_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 471

Score = 37.4 bits (85), Expect = 0.78
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1

Query: 247 NYHLSWAAICSIILMKILLLFATPVEIFGNILEYILNLFYMNNG 378
++ W SII+ K+L F+ P+ FG++ E LNL N G
Sbjct: 48 DFQRRWLIFISIIVQKLLQFFSKPISFFGSLTEMWLNLLSSNGG 91