DK960036 |
Clone id |
TST39A01NGRL0006_F02 |
Library |
TST39 |
Length |
659 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_F02. 5' end sequence. |
Accession |
DK960036 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCTCGTCGTCGTCTCCGGTTGATCCGCGCTCTTGCTTCTGCTCCATTGTTCTGTGCTTTC ACGTAGATGGATCGTGATTACGACGAAGAAGGCGAACCCATTTTTGATCCTGATAGGGAG CCCAGCCCGGAGCCCGAGGAGGAAGAAAATTGGGAGCAAGATGCAGGATTTGGTGCAGAG TCAGGGGATGATGACGAGGCTACGGCTTCTGCAAAGCCAAAGCCTAGAAAACGTTTGATT AAGAAGACGGTACGAGAACTTAGCCCCTCTGATGATGAAGGTCCTGCTCCAGAAGAAGTT GAAGAGGAAGAAGAGGTTGAGGAACGACCCAAAAAAAAACCGAAAGAGAAGGACAACAGG CCTTTGAAAGAGACAGGGAAGCCAAAATCTAAAGCGGCAGTAGCAATTAAACTGGCCAAG CTTGCCAAAGGCACTAGGAAAGCTGAGAAAGCTAGCACATCTCATGCCAGCAAAAGAGGA GACATTGAAGAAAAAGAAATGTGGGCCTCTGTTGCCGGAAATGAATCAGAGGATGACAAC GAAGGCATTAGGACGGGGGACGATGATGCTTTTATTGATGACACTGGAGTTGATCCGGAT ACTCGGTTGGCCTACAGTGATGATGAGGCAGGCTCCATTGGTGATGCTCCACAGGCTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P15381 |
Definition |
sp|P15381|CAC1C_RABIT Voltage-dependent L-type calcium channel subunit alpha-1C OS=Oryctolagus cuniculus |
Align length |
63 |
Score (bit) |
35.0 |
E-value |
0.35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BWS3 |
Definition |
tr|A5BWS3|A5BWS3_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
167 |
Score (bit) |
81.6 |
E-value |
4.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960036|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_F02, 5' (659 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BWS3|A5BWS3_VITVI Putative uncharacterized protein OS=Vitis... 82 4e-14 tr|A7PU85|A7PU85_VITVI Chromosome chr7 scaffold_31, whole genome... 78 4e-13 tr|B6TBF4|B6TBF4_MAIZE IWS1 C-terminus family protein OS=Zea may... 76 2e-12 tr|Q5ZDL8|Q5ZDL8_ORYSJ Putative uncharacterized protein P0416D03... 66 2e-09 tr|B8AD88|B8AD88_ORYSI Putative uncharacterized protein OS=Oryza... 66 2e-09 tr|Q9FVQ8|Q9FVQ8_ARATH Putative uncharacterized protein F3C3.8 O... 55 4e-06 tr|Q99CZ2|Q99CZ2_BHV4 Putative uncharacterized protein OS=Bovine... 41 0.057 tr|A4H753|A4H753_LEIBR Putative uncharacterized protein OS=Leish... 39 0.37 tr|Q22RI6|Q22RI6_TETTH Putative uncharacterized protein OS=Tetra... 37 1.1 tr|Q2R1Q3|Q2R1Q3_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 37 1.4 tr|Q4QG90|Q4QG90_LEIMA Putative uncharacterized protein OS=Leish... 37 1.4 tr|B5DS75|B5DS75_DROPS GA24977 OS=Drosophila pseudoobscura pseud... 36 1.8 tr|Q7RZ94|Q7RZ94_NEUCR Putative uncharacterized protein OS=Neuro... 36 1.8 tr|Q4CSH9|Q4CSH9_TRYCR Zinc carboxypeptidase, putative (Fragment... 36 2.4 tr|B4GKP9|B4GKP9_DROPE GL25646 OS=Drosophila persimilis GN=GL256... 36 2.4 tr|A1DDP7|A1DDP7_NEOFI Microfibrillar-associated protein MfaP1, ... 36 2.4 tr|B8PDM7|B8PDM7_9APHY Predicted protein OS=Postia placenta Mad-... 35 3.1 tr|Q9VEP9|Q9VEP9_DROME CG16941 OS=Drosophila melanogaster GN=CG1... 35 4.1 tr|B4M2N5|B4M2N5_DROVI GJ18616 OS=Drosophila virilis GN=GJ18616 ... 35 4.1 tr|B4IBP1|B4IBP1_DROSE GM15394 OS=Drosophila sechellia GN=GM1539... 35 4.1 tr|Q23MN4|Q23MN4_TETTH FtsJ-like methyltransferase family protei... 35 5.3 tr|A4HVJ2|A4HVJ2_LEIIN Putative uncharacterized protein OS=Leish... 35 5.3 tr|Q4WVQ0|Q4WVQ0_ASPFU Microfibrillar-associated protein MfaP1, ... 35 5.3 tr|B6QF26|B6QF26_PENMA NAP family protein OS=Penicillium marneff... 35 5.3 tr|B0Y1R7|B0Y1R7_ASPFC Microfibrillar-associated protein MfaP1, ... 35 5.3 tr|Q016F1|Q016F1_OSTTA [S] KOG1793 Uncharacterized conserved pro... 34 7.0 tr|B8CBT4|B8CBT4_THAPS Predicted protein OS=Thalassiosira pseudo... 34 7.0 tr|B6NJU7|B6NJU7_BRAFL Putative uncharacterized protein OS=Branc... 34 7.0 tr|B4Q0H3|B4Q0H3_DROYA GE16320 OS=Drosophila yakuba GN=GE16320 P... 34 7.0 tr|A6NP45|A6NP45_HUMAN Putative uncharacterized protein MBP OS=H... 34 7.0
>tr|A5BWS3|A5BWS3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006539 PE=4 SV=1 Length = 508
Score = 81.6 bits (200), Expect = 4e-14 Identities = 63/167 (37%), Positives = 77/167 (46%), Gaps = 9/167 (5%) Frame = +1
Query: 184 GDDDEATASAKPKPRKRLIKKTVRELSP------SDDEGPAXXXXXXXXXXXXXXXXXXX 345 GDD + +K KPRKRL+KK+ + SP +D+ PA Sbjct: 59 GDD---SGFSKSKPRKRLVKKSAKX-SPLHYPGIDEDDSPAAFQGDVDEDDFLRKRKDID 114
Query: 346 XXDNRPLKETGKPXXXXXXXXXXXXXXXGTRKAEKASTSHASKR---GDIEEKEMWASVA 516 R K+ G + K A R GD E KE+W ++A Sbjct: 115 SGSKRKEKKL-----------RLEKKDKGFKSGLKKGMFEAVPRIQDGDAEVKELWDTIA 163
Query: 517 GNESEDDNEGIRTGDDDAFIDDTGVDPDTRLAYSDDEAGSIGDAPQA 657 G +SEDD+EG RT DDD FIDDTGVDP R SD EA S GDAPQA Sbjct: 164 GGDSEDDHEGPRTVDDDNFIDDTGVDPADRYG-SDREARSPGDAPQA 209
>tr|A7PU85|A7PU85_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023696001 PE=4 SV=1 Length = 367
Score = 78.2 bits (191), Expect = 4e-13 Identities = 40/60 (66%), Positives = 45/60 (75%) Frame = +1
Query: 478 GDIEEKEMWASVAGNESEDDNEGIRTGDDDAFIDDTGVDPDTRLAYSDDEAGSIGDAPQA 657 GD E KE+W ++AG +SEDD+EG RT DDD FIDDTGVDP R SD EA S GDAPQA Sbjct: 10 GDAEVKELWDTIAGGDSEDDHEGPRTVDDDNFIDDTGVDPADRYG-SDREARSPGDAPQA 68
>tr|B6TBF4|B6TBF4_MAIZE IWS1 C-terminus family protein OS=Zea mays PE=2 SV=1 Length = 513
Score = 76.3 bits (186), Expect = 2e-12 Identities = 69/218 (31%), Positives = 86/218 (39%), Gaps = 21/218 (9%) Frame = +1
Query: 67 MDRDYDEEGEPIFD-----------PDRXXXXXXXXXXNWEQDAGFGAESGDDDEATASA 213 M +YD+EGEPI + P +W +D GDD A +S+ Sbjct: 1 MGDNYDDEGEPIVNLDEREPSPEHQPYEDLDDDLDGGGDWTRDRSPTPVHGDDGGAGSSS 60
Query: 214 KPKPRKRLIKKTVRELSPSDDEGPAXXXXXXXXXXXXXXXXXXXXXDNRPLKETG----K 381 KP RKRL+KK P DD R L G K Sbjct: 61 KP--RKRLLKKGGGGGMPGDDGLDDFGLEDEDADPSAEARKRKGSSSLRDLARGGAGREK 118
Query: 382 PXXXXXXXXXXXXXXXGTRKAEKASTSHAS------KRGDIEEKEMWASVAGNESEDDNE 543 G + + S S G+ E +E+W ++AG ESEDD E Sbjct: 119 KAKKMRMEDDGRGRDTGMVRDRRGSGGRDSGGRDDQDDGEREIQELWDTIAGGESEDDQE 178
Query: 544 GIRTGDDDAFIDDTGVDPDTRLAYSDDEAGSIGDAPQA 657 G+RT DDD FIDDTGVDP R SD+E S G QA Sbjct: 179 GVRTVDDDNFIDDTGVDPADRYG-SDNERHSPGRYAQA 215
>tr|Q5ZDL8|Q5ZDL8_ORYSJ Putative uncharacterized protein P0416D03.38-1 (Os01g0147200 protein) (Putative uncharacterized protein P0434B04.2-1) OS=Oryza sativa subsp. japonica GN=P0416D03.38-1 PE=4 SV=1 Length = 533
Score = 65.9 bits (159), Expect = 2e-09 Identities = 33/60 (55%), Positives = 42/60 (70%) Frame = +1
Query: 478 GDIEEKEMWASVAGNESEDDNEGIRTGDDDAFIDDTGVDPDTRLAYSDDEAGSIGDAPQA 657 G+ E +E+W ++AG +SEDD EG+RT DDD FIDDTGVDP R SD++ S PQA Sbjct: 178 GEREIQELWDTIAGGDSEDDQEGVRTLDDDNFIDDTGVDPADRYG-SDNDGHSPRHYPQA 236
>tr|B8AD88|B8AD88_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00379 PE=4 SV=1 Length = 536
Score = 65.9 bits (159), Expect = 2e-09 Identities = 33/60 (55%), Positives = 42/60 (70%) Frame = +1
Query: 478 GDIEEKEMWASVAGNESEDDNEGIRTGDDDAFIDDTGVDPDTRLAYSDDEAGSIGDAPQA 657 G+ E +E+W ++AG +SEDD EG+RT DDD FIDDTGVDP R SD++ S PQA Sbjct: 181 GEREIQELWDTIAGGDSEDDQEGVRTLDDDNFIDDTGVDPADRYG-SDNDGHSPRHYPQA 239
>tr|Q9FVQ8|Q9FVQ8_ARATH Putative uncharacterized protein F3C3.8 OS=Arabidopsis thaliana GN=At1g32130 PE=4 SV=1 Length = 404
Score = 55.1 bits (131), Expect = 4e-06 Identities = 28/59 (47%), Positives = 37/59 (62%) Frame = +1
Query: 430 GTRKAEKASTSHASKRGDIEEKEMWASVAGNESEDDNEGIRTGDDDAFIDDTGVDPDTR 606 G+ K ++ + +R E EMW S+A N E+D EG+RT DDD FIDDTG+DP R Sbjct: 29 GSGKEKRHKFPNRGERKSEEIDEMWKSIAHNP-ENDEEGVRTMDDDNFIDDTGLDPSER 86
>tr|Q99CZ2|Q99CZ2_BHV4 Putative uncharacterized protein OS=Bovine herpesvirus 4 PE=4 SV=1 Length = 514
Score = 41.2 bits (95), Expect = 0.057 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = +1
Query: 439 KAEKASTSHASKRGDI---EEKEMWASVAGNESEDDNEGIRTGDDDAFIDDTGVDPDTRL 609 K +K S + +I +E+E+ ++ + SE+D EGIR D D D+ GVDPD Sbjct: 337 KTQKESAQSEGDKQEIVIEDEEEIILEISSSSSEEDEEGIREEDIDDEGDEEGVDPDDE- 395
Query: 610 AYSDDEAGSIGDA 648 +D G GD+ Sbjct: 396 -EGEDGVGGDGDS 407
>tr|A4H753|A4H753_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis GN=LbrM13_V2.0460 PE=4 SV=1 Length = 1328
Score = 38.5 bits (88), Expect = 0.37 Identities = 25/71 (35%), Positives = 37/71 (52%) Frame = +1
Query: 433 TRKAEKASTSHASKRGDIEEKEMWASVAGNESEDDNEGIRTGDDDAFIDDTGVDPDTRLA 612 T A AS HA+ G E++E W S ++ +DD E ++ GDDD +D G + D Sbjct: 1138 TETATHASEGHAAGEG--EDEEEWDSECSSKEDDDGEWLQDGDDDD--EDDGSEWDD--- 1190
Query: 613 YSDDEAGSIGD 645 SD G +G+ Sbjct: 1191 -SDGAEGFLGN 1200
>tr|Q22RI6|Q22RI6_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00016010 PE=4 SV=1 Length = 1212
Score = 37.0 bits (84), Expect = 1.1 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = +1
Query: 439 KAEKAST--SHASKRGDIEEKEMWASVAGNESED-DNEGIRTGDDDAFIDDTGVDPDTRL 609 K EK S+ S K+ +K S+AG++ +D D++ I +DD + +D D D Sbjct: 557 KVEKQSSKKSKKKKKSKKSKKRSRRSIAGDDEDDYDDDDIDEDEDDYYSEDDDWDSDEDY 616
Query: 610 AYSDDEAGSIGDAP 651 Y DDE D P Sbjct: 617 DYEDDEDQEQQDLP 630
>tr|Q2R1Q3|Q2R1Q3_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g38440 PE=4 SV=1 Length = 1295
Score = 36.6 bits (83), Expect = 1.4 Identities = 22/63 (34%), Positives = 28/63 (44%) Frame = +1
Query: 439 KAEKASTSHASKRGDIEEKEMWASVAGNESEDDNEGIRTGDDDAFIDDTGVDPDTRLAYS 618 K EK + G EEKE V E EDD++ DDD + DD D + Y Sbjct: 481 KQEKEKEEERKEEGQNEEKEGRKEVGEEEKEDDDDDY--DDDDDYDDDDYDDNEEEKKYD 538
Query: 619 DDE 627 DD+ Sbjct: 539 DDD 541
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