DK960038
Clone id TST39A01NGRL0006_F04
Library
Length 435
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_F04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TAATGTAATGCATTTGGAAAATCATGCTTGACCAGTGGTGATAAATATTGTGTTGTCGGT
ACTCCATACATGGGATGTTGTGTGCTTTCGAATGGGCCCAAATAAGTAGGACCCCTTGCC
AAGCCTTCATAAGGAAAGCTTGTCCTGTTTTGTGTAGGAGTAAAGTTTTCGGCTTGTTAC
GATAAGAATGTAATAAGCCCTGTATGCAAGCGTGTGAAACAGAGGCTTGTCCTTAAAGGG
CTGCCTTTGTTGGTGATTAAAGGATACTATGGTTCTAGGTTTTCCCATGTACATCCCTCG
AGGATCTGGCTGAAGGGAGTTTAAAGCCCCCTTCAAATAATTACATAAAAAGTTTGCTTT
GTATGTGTACCCCATATGCTAATATTTGTGCATTGAAGCCGAATTACTTTGTGCAAAAAA
AAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5AG31
Definition sp|Q5AG31|MED14_CANAL Mediator of RNA polymerase II transcription subunit 14 OS=Candida albicans
Align length 60
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960038|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_F04, 5'
(414 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5AG31|MED14_CANAL Mediator of RNA polymerase II transcriptio... 31 1.7
sp|Q00163|VG09_ICHV1 Uncharacterized gene 9 zinc-binding protein... 29 6.5
sp|Q9USW4|YHZ9_SCHPO Uncharacterized protein C21B10.09 OS=Schizo... 29 8.4
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha... 29 8.4
sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1 29 8.4

>sp|Q5AG31|MED14_CANAL Mediator of RNA polymerase II transcription
subunit 14 OS=Candida albicans GN=RGR1 PE=3 SV=2
Length = 1270

Score = 31.2 bits (69), Expect = 1.7
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3

Query: 196 LLHSYRNKPKTLLLHKTGQAFLMKA-WQGVLLIWAHSKAHNIPCMEYRQHNIYHHWSSMI 20
LLH Y N K LL K Q L+ + W+G I + I + QH + +W S I
Sbjct: 294 LLHKYSNSFKIYLLAKQFQTLLINSRWRGNFQINYQTNKSLIVINYWSQHYLSRNWKSFI 353


>sp|Q00163|VG09_ICHV1 Uncharacterized gene 9 zinc-binding protein
OS=Ictalurid herpesvirus 1 GN=9 PE=4 SV=1
Length = 158

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3

Query: 141 CPVLCRSKVFGLLR*ECNKPCMQACETEAC 230
CPV R+ V +R C ACETEAC
Sbjct: 72 CPVCGRAVVGPTVREACGHVTCNACETEAC 101


>sp|Q9USW4|YHZ9_SCHPO Uncharacterized protein C21B10.09
OS=Schizosaccharomyces pombe GN=SPBC21B10.09 PE=2 SV=1
Length = 519

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1

Query: 226 LVLKGLPLLVIKGYYGSRFSHVHPSRIWLKG 318
++L PL + G Y R S+ P IWLKG
Sbjct: 317 IILINFPLGLALGVYTGRISNYRPLDIWLKG 347


>sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6
OS=Caenorhabditis elegans GN=K02A2.6 PE=2 SV=1
Length = 1268

Score = 28.9 bits (63), Expect = 8.4
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -3

Query: 244 AAL*GQASVSHACIQGLLHSYRNKPKTLLLHKTGQA--FLMKAWQGVLLIWAHSKAHNIP 71
A + G+ SV+ + L SYRN P + L T F K + L+ + +P
Sbjct: 956 AKIKGEGSVNQQILNKFLISYRNTPHSALNGSTPAECHFGRKIRTTMSLLMPTDRVLKVP 1015

Query: 70 CMEYRQHNIYHHW 32
+ Q N+ HH+
Sbjct: 1016 KLTQYQQNMKHHY 1028


>sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1
Length = 5255

Score = 28.9 bits (63), Expect = 8.4
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +3

Query: 51 CCRYSIHGMLCAFEWAQISRTPCQAFIR--KACPVL---CRSKVFGLLR*ECNKPCMQAC 215
C ++ C+ A+ PC R +ACP C GL+ C KPC +C
Sbjct: 3492 CGGQAVRTRSCSSPPARFGGLPCAGEARQSRACPWATSSCPECAGGLVAFTCGKPCPHSC 3551

Query: 216 E 218
E
Sbjct: 3552 E 3552


tr_hit_id Q5TN58
Definition tr|Q5TN58|Q5TN58_ANOGA AGAP012297-PA (Fragment) OS=Anopheles gambiae
Align length 46
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960038|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_F04, 5'
(414 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5TN58|Q5TN58_ANOGA AGAP012297-PA (Fragment) OS=Anopheles gam... 35 1.9
tr|Q705X0|Q705X0_SCYCA Angiotensin receptor OS=Scyliorhinus cani... 34 3.2
tr|Q7NMI5|Q7NMI5_GLOVI Gll0781 protein OS=Gloeobacter violaceus ... 33 7.1
tr|A4FNS3|A4FNS3_SACEN Carbohydrate kinase, FGGY OS=Saccharopoly... 33 7.1
tr|B2AN70|B2AN70_PODAN Predicted CDS Pa_6_9120 OS=Podospora anse... 33 7.1

>tr|Q5TN58|Q5TN58_ANOGA AGAP012297-PA (Fragment) OS=Anopheles
gambiae GN=AGAP012297 PE=4 SV=3
Length = 914

Score = 35.0 bits (79), Expect = 1.9
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = -2

Query: 170 ENFTPTQNRTSFPYEGLARGPTYLGPFESTQHPMYGVPTTQYLSPL 33
E+ +PT+ +S PY+G A GPT++ ++ HP + T Q SPL
Sbjct: 611 EDRSPTKTGSSAPYDGAA-GPTFVRVHKAAAHPGKVIKTIQRTSPL 655


>tr|Q705X0|Q705X0_SCYCA Angiotensin receptor OS=Scyliorhinus
canicula PE=2 SV=1
Length = 362

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = -3

Query: 196 LLHSYRNKPKTLLLHKTGQAFLMKAWQGVLLIWAHSKAHNIPCMEYRQHNIYHHWSSMIF 17
++H +++ K L+H AW +++W + ++P M +R Y W+ I
Sbjct: 133 IVHPIKSRTKRTLVH---------AWMACIMVWILAGLASLPAMFFRDAVHYSDWNKTIC 183

Query: 16 QMHY 5
HY
Sbjct: 184 AFHY 187


>tr|Q7NMI5|Q7NMI5_GLOVI Gll0781 protein OS=Gloeobacter violaceus
GN=gll0781 PE=4 SV=1
Length = 462

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1

Query: 136 KLVLFCV-GVKFSACYDKNVISPVCKRVKQRLVLKGLPLLVIKGYYGSRFSHVHP-SRIW 309
KLV C GV + VC + L+ KG+ I G+ +SH+HP R+W
Sbjct: 214 KLVAGCTDGVAGQIASGALAVGQVCLSLGSTLIFKGVSEAKIASADGAVYSHLHPDGRLW 273

Query: 310 LKG 318
L G
Sbjct: 274 LPG 276


>tr|A4FNS3|A4FNS3_SACEN Carbohydrate kinase, FGGY
OS=Saccharopolyspora erythraea (strain NRRL 23338)
GN=SACE_6529 PE=4 SV=1
Length = 477

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1

Query: 226 LVLKGLPLLVIKGYYGSRFSHVHPSRIWLKG 318
LVLKG+ +++ G+ +SH+HP +WL G
Sbjct: 261 LVLKGVSKELVRDPAGAVYSHLHPDGVWLPG 291


>tr|B2AN70|B2AN70_PODAN Predicted CDS Pa_6_9120 OS=Podospora
anserina PE=4 SV=1
Length = 412

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Frame = -3

Query: 217 SHACIQGLLHSYRN--------KPKTLLLHKTGQAFLMKAWQGVLLIWAHSKA 83
+H C +GL +Y + K L L++ G A+ + AW + W H+KA
Sbjct: 240 AHTCTEGLRDAYSSVIQVESMLKKNELPLNQLGDAWSLVAWNSTVASWKHAKA 292