DK960042
Clone id TST39A01NGRL0006_F08
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_F08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CTCCCATGCGCTGCGCAAGGCACACTCTCTCCAAAACCTTAAATTTCCGCCAAGCTCTCT
CTTTCTATGTCTCTCTCGTCCTCCTCGTTGTCACTTCCCTCCGAGGTTCTATGTTCATTC
TGCTCGCAGTTGGTACCTTCAAGAAAAACTTTCTGCTGCCCACATTCCCTCTCCAGAAGG
CTCCATAGCCCACATCGCTTGTTTTCGTTTTCTATTGATTCGGCGGTAACCCAACTTGTG
CTATTGCGGGATTTTCTGTTTGCTGTCGCTCTGTAGTTTCCAGGGAGGGGAGGAGGGTCT
GCCTTGATCACGAGCCAACAACCACCACTCACAAATCTCTCTCTCTCTCTCTCTCTCTCT
CTCACACAGACACGCACACACACATACTGACACACGCACCGTCTCCTCTGTCTTTGCTGG
CAGACCCCCCCCCCAACAACAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9VCR6
Definition sp|Q9VCR6|SAV_DROME Scaffold protein salvador OS=Drosophila melanogaster
Align length 38
Score (bit) 32.7
E-value 0.66
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960042|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_F08, 5'
(434 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9VCR6|SAV_DROME Scaffold protein salvador OS=Drosophila mela... 33 0.66
sp|Q64MV4|PPCK_BACFR Phosphoenolpyruvate carboxykinase [ATP] OS=... 31 1.9
sp|Q5L7N5|PPCK_BACFN Phosphoenolpyruvate carboxykinase [ATP] OS=... 31 1.9
sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus... 30 5.6
sp|Q86SU0|ILDR1_HUMAN Immunoglobulin-like domain-containing rece... 29 7.3
sp|Q9C109|YIOG_SCHPO Uncharacterized protein P27G11.16 OS=Schizo... 29 9.6
sp|Q9KBM8|COBB_BACHD Cobyrinic acid A,C-diamide synthase OS=Baci... 29 9.6

>sp|Q9VCR6|SAV_DROME Scaffold protein salvador OS=Drosophila
melanogaster GN=sav PE=1 SV=2
Length = 608

Score = 32.7 bits (73), Expect = 0.66
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = -1

Query: 308 IKADPPPLPGNYRATANRKSRNSTSWVTAESIENENKR 195
+++ PP P +RA++N+ S+NS+++V E IE ++
Sbjct: 123 VRSHPPLPPHQFRASSNQLSQNSSNYVNFEQIERMRRQ 160


>sp|Q64MV4|PPCK_BACFR Phosphoenolpyruvate carboxykinase [ATP]
OS=Bacteroides fragilis GN=pckA PE=3 SV=1
Length = 535

Score = 31.2 bits (69), Expect = 1.9
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = -1

Query: 260 NRKSRNSTSWVTAESIENENKRCG--LWSLLE----RECGQQKVFLEGTNCEQNE 114
N S NS W T+E +N+NK C W+ L+ +E +++F+ T C NE
Sbjct: 69 NEASENSVWW-TSEEYKNDNKPCSEEAWADLKAKAVKELSNKRLFVVDTFCGANE 122


>sp|Q5L7N5|PPCK_BACFN Phosphoenolpyruvate carboxykinase [ATP]
OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
GN=pckA PE=3 SV=1
Length = 535

Score = 31.2 bits (69), Expect = 1.9
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = -1

Query: 260 NRKSRNSTSWVTAESIENENKRCG--LWSLLE----RECGQQKVFLEGTNCEQNE 114
N S NS W T+E +N+NK C W+ L+ +E +++F+ T C NE
Sbjct: 69 NEASENSVWW-TSEEYKNDNKPCSEEAWADLKAKAVKELSNKRLFVVDTFCGANE 122


>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201

Score = 29.6 bits (65), Expect = 5.6
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -1

Query: 296 PPPLPGNYRATANRKSRNSTSWVTAESIENENKRCGLWSLLERECGQQKVFLE 138
PPPLP + T + S++ + W T+ E EN + W L E +Q V +E
Sbjct: 167 PPPLPSHLPHTLLKTSKDRSIWNTSTQEERENIKT-FWLELGEEERRQLVKVE 218


>sp|Q86SU0|ILDR1_HUMAN Immunoglobulin-like domain-containing
receptor 1 OS=Homo sapiens GN=ILDR1 PE=1 SV=2
Length = 546

Score = 29.3 bits (64), Expect = 7.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -3

Query: 300 RPSSPPWKLQSDSKQKIPQ*HKLGYRRINRKRKQAMWAMEPSGEGMWAAE 151
RPS PP++ + + + P + R R+R ++ PSG W++E
Sbjct: 433 RPSHPPFRSRCQERPRRPSPRESTQRHGRRRRHRSYSPPLPSGLSSWSSE 482


>sp|Q9C109|YIOG_SCHPO Uncharacterized protein P27G11.16
OS=Schizosaccharomyces pombe GN=SPAP27G11.16 PE=2 SV=1
Length = 104

Score = 28.9 bits (63), Expect = 9.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1

Query: 172 SRRLHSPHRLFSFSIDSAVTQLVLLRDFLFAVA 270
S R+ RLFSF+ S T L +LRDF+ A +
Sbjct: 43 SNRILIAVRLFSFAFSSFSTTLRILRDFIIAAS 75


>sp|Q9KBM8|COBB_BACHD Cobyrinic acid A,C-diamide synthase
OS=Bacillus halodurans GN=cobB PE=3 SV=1
Length = 465

Score = 28.9 bits (63), Expect = 9.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1

Query: 284 PGNYRATANRKSRNSTSWVTAESIENE 204
P +RA R SRN SW+ +E + N+
Sbjct: 46 PSYHRAVTKRASRNLDSWMVSEDVVND 72


tr_hit_id B5Y4K1
Definition tr|B5Y4K1|B5Y4K1_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1
Align length 39
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK960042|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0006_F08, 5'
(434 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5Y4K1|B5Y4K1_PHATR Predicted protein OS=Phaeodactylum tricor... 35 2.4
tr|Q5ZB66|Q5ZB66_ORYSJ Putative uncharacterized protein B1103C09... 33 5.4

>tr|B5Y4K1|B5Y4K1_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATR_43861 PE=4 SV=1
Length = 445

Score = 34.7 bits (78), Expect = 2.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1

Query: 227 TAESIENENKRCGLWSLLERECGQQKVFLEGTNCEQNEH 111
T + IE+E R W L E G+QKVF EG + Q H
Sbjct: 298 TTDRIEDEFLRLACWRLSENSIGEQKVFREGMSVAQLMH 336


>tr|Q5ZB66|Q5ZB66_ORYSJ Putative uncharacterized protein B1103C09.41
OS=Oryza sativa subsp. japonica GN=B1103C09.41 PE=4 SV=1
Length = 417

Score = 33.5 bits (75), Expect = 5.4
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +2

Query: 2 SHALRKAHSLQNLKF----PPSSLFLCLSRPPRCHFPPRFYVHSARSWYLQEKLSAAHIP 169
+HA++KA + +LK P SSL L S PP + PP ARS + K+ +
Sbjct: 28 NHAVQKAAEINDLKLGARRPSSSLGLASSSPPSSYRPP------ARSLFPHRKVHFTSLL 81

Query: 170 SPE 178
SPE
Sbjct: 82 SPE 84