DK960059 |
Clone id |
TST39A01NGRL0006_G01 |
Library |
TST39 |
Length |
631 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0006_G01. 5' end sequence. |
Accession |
DK960059 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
GTGAAGCTCTTTAATGCGGTTGCTGCAGAGGATCTGATAATTAAGGAGAATCGTGTAGCG GGTGTGGTCACAAATTGGGCTCTTGTGTCTATGAACCATAATACTCAGAGTTGCATGGAT CCTAATGTGATGGAGTCTAAGGTGGTGGTGAGCTCGTGTGGCCATGATGGTCCCTTTGGT GCTACCGGTGTGAAGAGATTGAAGAGTATTGGTATGATTGACAAGGTCCCTGGCATGAAG GCCCTAGACATGAATGCTGCGGAGGATGCAATTGTTAAGTTCACACGTGAGGTGGTGCCT GGCATGATTGTAACGGGTATGGAAGTCGCTGAGATTGATGGCTCTCCTAGGATGGGACCT ACTTTTGGAGCTATGATGGTGTCTGGACAGAAGGCAGCTCACCTTGCCCTGAAGGCTCTT GGGCTTCCCAATGCTCTGGATGGCTCCTACAAACTGGGCGGAGTGCATCCCGAAACTCTG GTGCTGGCATCTGCTGAGGACGAGACTGCCTCTGCGTAGCTTTGTTTTTTGATGATAAGG CTAGATTAGGAGCTGATTGGAACCGAAAAGAAGCGTCTTTATCTTTTGCTGTGTAAATGC TTTTCCTTTCAATAAATATGAGCTCTTAGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
172 |
Score (bit) |
269.0 |
E-value |
1.0e-71 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK960059|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0006_G01, 5' (631 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 269 1e-71 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 264 3e-70 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 255 1e-67 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 246 5e-65 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 241 2e-63 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 170 6e-42 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 169 1e-41 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 169 1e-41 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 165 2e-40 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 155 1e-37 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 126 1e-28 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 106 9e-23 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 106 9e-23 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 105 3e-22 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 100 1e-20 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 96 2e-19 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 89 2e-17 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 88 4e-17 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 87 5e-17 sp|A4YIV7|THI4_METS5 Putative thiazole biosynthetic enzyme OS=Me... 86 2e-16 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 85 4e-16 sp|Q975R0|THI4_SULTO Putative thiazole biosynthetic enzyme OS=Su... 84 6e-16 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 84 6e-16 sp|A4WKY7|THI4_PYRAR Putative thiazole biosynthetic enzyme OS=Py... 82 3e-15 sp|Q3IMI0|THI4_NATPD Putative thiazole biosynthetic enzyme OS=Na... 80 7e-15 sp|A0B880|THI4_METTP Putative thiazole biosynthetic enzyme OS=Me... 79 1e-14 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 79 1e-14 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 79 2e-14 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 79 2e-14 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 78 3e-14
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 269 bits (687), Expect = 1e-71 Identities = 135/172 (78%), Positives = 149/172 (86%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGHDGPFG 180 VKLFNAVAAEDLI+K RV GVVTNWALVSMNH+TQSCMDPNVME+KVVVSSCGHDGPFG Sbjct: 186 VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG 245
Query: 181 ATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGSPRMGP 360 ATGVKRLKSIGMI++VPGMKALDMN+AEDAIV+ TREVVPGMIVTGMEVAEIDG+PRMGP Sbjct: 246 ATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGP 305
Query: 361 TFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 516 TFGAMM+SGQ PNALDG+Y +GGVHPE ++ A+ ETA A Sbjct: 306 TFGAMMISGQKAAHLALKSLGQPNALDGTY-VGGVHPELILAAADSAETADA 356
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 264 bits (674), Expect = 3e-70 Identities = 132/172 (76%), Positives = 145/172 (84%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGHDGPFG 180 VKLFNAVAAEDLI+K RV GVVTNWALVSMNH+TQSCMDPNVME+KVVVSSCGHDGPFG Sbjct: 182 VKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG 241
Query: 181 ATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGSPRMGP 360 ATGVK L+SIGMID VPGMKALDMN AEDAIV+ TRE+VPGMIVTGMEVAEIDG+PRMGP Sbjct: 242 ATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGP 301
Query: 361 TFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 516 TFGAMM+SGQ PNALDGSY +GG+HPE ++ A+ E A A Sbjct: 302 TFGAMMISGQKAAHLALKALGLPNALDGSY-VGGIHPELILAAADSAEIADA 352
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 255 bits (652), Expect = 1e-67 Identities = 128/172 (74%), Positives = 143/172 (83%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGHDGPFG 180 VKLFNAVAAEDLI+K NRV GVVTNWALV+ NH+TQSCMDPNVME+K+VVSSCGHDGPFG Sbjct: 179 VKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFG 238
Query: 181 ATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGSPRMGP 360 ATGVKRLKSIGMID VPGMKALDMN AEDAIV+ TREVVPGMIVTGMEVAEIDG+PRMGP Sbjct: 239 ATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGP 298
Query: 361 TFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 516 TFGAMM+SGQ PNA+DG+ +G + PE ++ A+ ET A Sbjct: 299 TFGAMMISGQKAGQLALKALGLPNAIDGTL-VGNLSPELVLAAADSAETVDA 349
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 246 bits (629), Expect = 5e-65 Identities = 125/173 (72%), Positives = 139/173 (80%), Gaps = 1/173 (0%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGHDGPFG 180 VKLFNAVA EDLI++ RV GVVTNWALVSMNH+TQSCMDPNVME+KVVVSSCGHDGPFG Sbjct: 182 VKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG 241
Query: 181 ATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGSPRMGP 360 ATGVKRL+ IGMI VPGMKALDMNAAED IV+ TREVVPGMIVTGMEVAEIDG+PRMGP Sbjct: 242 ATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGP 301
Query: 361 TFGAMMVSGQXXXXXXXXXXXXPNALDGSY-KLGGVHPETLVLASAEDETASA 516 TFGAMM+SGQ PNA+DG+ ++ E V+AS +DE A Sbjct: 302 TFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALREEFVIASKDDEVVDA 354
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 241 bits (616), Expect = 2e-63 Identities = 123/172 (71%), Positives = 137/172 (79%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKENRVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGHDGPFG 180 VKLFNAVA EDLI++ RV GVVTNWALVSMNH+TQSCMDPNVME+KVVVSSCGHDGPFG Sbjct: 185 VKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG 244
Query: 181 ATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGSPRMGP 360 ATGVKRL+ IGMI VPGMKALDMN AED IV+ TREVVPGMIVTGMEVAEIDG+PRMGP Sbjct: 245 ATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGP 304
Query: 361 TFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGVHPETLVLASAEDETASA 516 TFGAMM+SGQ PNA+DG+ + E L++A +DE A Sbjct: 305 TFGAMMISGQKAAHLALKALGRPNAVDGT--MSPPLREELMIAYKDDEVVDA 354
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 170 bits (430), Expect = 6e-42 Identities = 86/134 (64%), Positives = 100/134 (74%), Gaps = 5/134 (3%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKEN-----RVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGH 165 VKLFNA A EDLI+KE R+AGVVTNW LVS+NH QSCMDPN + + +VVS+ GH Sbjct: 173 VKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGH 232
Query: 166 DGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGS 345 DGPFGA VKRL S ++ + M+ LDMN AED IVK TREV PGMIV GME++E DG+ Sbjct: 233 DGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGA 292
Query: 346 PRMGPTFGAMMVSG 387 RMGPTFG MM SG Sbjct: 293 NRMGPTFGGMMFSG 306
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 169 bits (428), Expect = 1e-41 Identities = 82/132 (62%), Positives = 105/132 (79%), Gaps = 4/132 (3%) Frame = +1
Query: 4 KLFNAVAAEDLIIKEN----RVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGHDG 171 KLFNA EDLI + + R++GVVTNW LVSM+H+ QSCMDPN + + +V+S+ GHD Sbjct: 173 KLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDA 232
Query: 172 PFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGSPR 351 P GA VKRL S+G I+K+ GM+ LDMN AEDAIVK TRE+VPG+IV GME++E+DG+ R Sbjct: 233 PMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANR 292
Query: 352 MGPTFGAMMVSG 387 MGPTFGAM++SG Sbjct: 293 MGPTFGAMVLSG 304
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 169 bits (428), Expect = 1e-41 Identities = 82/133 (61%), Positives = 105/133 (78%), Gaps = 4/133 (3%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKEN----RVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGHD 168 +KLFNA EDLI + + R+AGVVTNW LVSM+H+ QSCMDPN + + +++S+ GHD Sbjct: 168 IKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHD 227
Query: 169 GPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGSP 348 GP GA VKRL S+ I+K+ GM+ LDMN AEDAIVK TRE+VPG+IV GME++E+DG+ Sbjct: 228 GPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGAN 287
Query: 349 RMGPTFGAMMVSG 387 RMGPTFGAM +SG Sbjct: 288 RMGPTFGAMALSG 300
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 165 bits (418), Expect = 2e-40 Identities = 82/134 (61%), Positives = 105/134 (78%), Gaps = 5/134 (3%) Frame = +1
Query: 1 VKLFNAVAAEDLIIK--EN---RVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSCGH 165 VKLFNA A EDLI + EN ++AGVV NW LV+++H+ SCMDPN + + V++S+ GH Sbjct: 174 VKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGH 233
Query: 166 DGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEIDGS 345 DGPFGA KRL S+G +DK+ GM+ LDMN+AEDAIVK TREV G+I+ GME++EIDG Sbjct: 234 DGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGF 293
Query: 346 PRMGPTFGAMMVSG 387 RMGPTFGAM++SG Sbjct: 294 NRMGPTFGAMVLSG 307
>sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1 Length = 338
Score = 155 bits (393), Expect = 1e-37 Identities = 78/137 (56%), Positives = 99/137 (72%), Gaps = 7/137 (5%) Frame = +1
Query: 1 VKLFNAVAAEDLIIKE-------NRVAGVVTNWALVSMNHNTQSCMDPNVMESKVVVSSC 159 VK+FNA A EDLIIK R+AG VTNW LVS+NH+ QSCMDP+ + + +V S Sbjct: 177 VKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFA 236
Query: 160 GHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTREVVPGMIVTGMEVAEID 339 GHDGPFGA VKR+ S G+ + + M+ LDM AED I TRE++PG+IV GME++E D Sbjct: 237 GHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFD 296
Query: 340 GSPRMGPTFGAMMVSGQ 390 GS RMGPTFGAM++SG+ Sbjct: 297 GSARMGPTFGAMLLSGK 313
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
172 |
Score (bit) |
274.0 |
E-value |
3.0e-72 |
Report |
|